FFCP PHASE1:Mm9::chr19:18807230..18807233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=896 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000083007_5end | |association_with_transcript=0bp_to_ENSMUST00000083007_5end | ||
|cluster_id=chr19:18807230..18807233,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000083007_5end | |description=CAGE_peak_1_at_ENSMUST00000083007_5end | ||
|id=chr19:18807230..18807233,+ | |id=chr19:18807230..18807233,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.58e-34!121;CL:0000012!3.58e-34!121;CL:0002371!2.49e-33!118;CL:0000548!1.87e-32!115;CL:0000004!1.87e-32!115;CL:0000255!1.87e-32!115;CL:0000034!1.17e-31!97;CL:0000723!9.50e-30!91;CL:0000048!9.50e-30!91;CL:0002321!3.47e-22!70;CL:0000220!3.47e-22!70;CL:0000055!4.43e-20!50;CL:0002319!8.32e-20!43;CL:0000221!4.74e-19!44;CL:0000133!4.74e-19!44;CL:0000393!1.22e-15!39;CL:0000211!1.22e-15!39;CL:0000540!1.49e-15!33;CL:0000047!1.49e-15!33;CL:0000031!1.49e-15!33;CL:0000404!1.49e-15!33;CL:0000219!1.23e-14!54;CL:0000117!1.45e-13!23;CL:0000337!1.45e-13!23;CL:0002320!1.36e-11!46;CL:0000134!1.36e-11!46;CL:0000063!4.30e-10!66;CL:0002031!1.64e-07!25;CL:0000988!4.98e-07!32;CL:0002032!4.98e-07!32;CL:0000037!4.98e-07!32;CL:0000566!4.98e-07!32;CL:0000837!4.98e-07!32 | |ontology_enrichment_celltype=CL:0000144!3.58e-34!121;CL:0000012!3.58e-34!121;CL:0002371!2.49e-33!118;CL:0000548!1.87e-32!115;CL:0000004!1.87e-32!115;CL:0000255!1.87e-32!115;CL:0000034!1.17e-31!97;CL:0000723!9.50e-30!91;CL:0000048!9.50e-30!91;CL:0002321!3.47e-22!70;CL:0000220!3.47e-22!70;CL:0000055!4.43e-20!50;CL:0002319!8.32e-20!43;CL:0000221!4.74e-19!44;CL:0000133!4.74e-19!44;CL:0000393!1.22e-15!39;CL:0000211!1.22e-15!39;CL:0000540!1.49e-15!33;CL:0000047!1.49e-15!33;CL:0000031!1.49e-15!33;CL:0000404!1.49e-15!33;CL:0000219!1.23e-14!54;CL:0000117!1.45e-13!23;CL:0000337!1.45e-13!23;CL:0002320!1.36e-11!46;CL:0000134!1.36e-11!46;CL:0000063!4.30e-10!66;CL:0002031!1.64e-07!25;CL:0000988!4.98e-07!32;CL:0002032!4.98e-07!32;CL:0000037!4.98e-07!32;CL:0000566!4.98e-07!32;CL:0000837!4.98e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.99e-44,97;CL:0000723,2.32e-42,91;CL:0000048,2.32e-42,91;CL:0002321,2.52e-30,70;CL:0002319,2.16e-29,43;CL:0000221,2.25e-28,44;CL:0000133,2.25e-28,44;CL:0000540,5.37e-24,33;CL:0000047,5.37e-24,33;CL:0000031,5.37e-24,33;CL:0000404,5.37e-24,33;CL:0000393,3.10e-23,39;CL:0000211,3.10e-23,39;CL:0000117,3.84e-20,23;CL:0000337,3.84e-20,23;CL:0000219,3.84e-20,54;CL:0002320,2.23e-16,46;CL:0000134,2.23e-16,46;CL:0002031,6.59e-10,25;CL:0000988,1.14e-09,32;CL:0002032,1.14e-09,32;CL:0000037,1.14e-09,32;CL:0000837,1.14e-09,32;CL:0000839,2.48e-08,13;CL:0000049,3.19e-08,19;CL:0000763,3.67e-07,16;CL:0002453,5.07e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.54e-15!75;UBERON:0001016!2.54e-15!75;UBERON:0001017!6.46e-15!73;UBERON:0005743!6.46e-15!73;UBERON:0002020!6.64e-14!34;UBERON:0002384!1.36e-11!46;UBERON:0002791!3.81e-11!29;UBERON:0003528!3.81e-11!29;UBERON:0001893!3.81e-11!29;UBERON:0000956!8.83e-10!21;UBERON:0001869!8.83e-10!21;UBERON:0000203!8.83e-10!21;UBERON:0004121!1.05e-08!102;UBERON:0000924!1.05e-08!102;UBERON:0006601!1.05e-08!102;UBERON:0002619!1.72e-08!17;UBERON:0001049!2.10e-08!52;UBERON:0005068!2.10e-08!52;UBERON:0006241!2.10e-08!52;UBERON:0007135!2.10e-08!52;UBERON:0002616!5.00e-08!49;UBERON:0002780!8.17e-08!39;UBERON:0001890!8.17e-08!39;UBERON:0006240!8.17e-08!39;UBERON:0003080!1.09e-07!40;UBERON:0000955!1.79e-07!50;UBERON:0006238!1.79e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.56e-22,73;UBERON:0001016,7.21e-22,75;UBERON:0002020,1.16e-19,34;UBERON:0002384,2.23e-16,46;UBERON:0003528,1.94e-15,29;UBERON:0002791,1.94e-15,29;UBERON:0001893,1.94e-15,29;UBERON:0004121,2.67e-14,95;UBERON:0000924,2.67e-14,95;UBERON:0006601,2.67e-14,95;UBERON:0000073,1.51e-13,54;UBERON:0000956,2.08e-12,21;UBERON:0001869,2.08e-12,21;UBERON:0000203,2.08e-12,21;UBERON:0002619,3.16e-11,17;UBERON:0001049,3.65e-11,52;UBERON:0005068,3.65e-11,52;UBERON:0006241,3.65e-11,52;UBERON:0007135,3.65e-11,52;UBERON:0002021,1.71e-09,10;UBERON:0000411,1.71e-09,10;UBERON:0001950,1.71e-09,10;UBERON:0002780,2.62e-09,39;UBERON:0001890,2.62e-09,39;UBERON:0006240,2.62e-09,39;UBERON:0002346,2.83e-09,64;UBERON:0003075,2.83e-09,64;UBERON:0007284,2.83e-09,64;UBERON:0003080,7.05e-09,40;UBERON:0002616,2.06e-08,46;UBERON:0002371,2.29e-08,16;UBERON:0000955,4.66e-08,47;UBERON:0006238,4.66e-08,47;UBERON:0010371,7.28e-07,73 | |||
|phase1_expression=0,0,0.454999239389536,0.90739263392049,0.500895729946347,0,0.467225281191051,1.93684985162364,1.68946466582,0.468129052643987,2.05461561870606,1.99430397488341,1.36960583944965,1.74840804837995,9.99329285446988,1.01237633694913,16.0899231969474,2.20823515750766,1.09691546884591,7.21462408056651,0.17008658030214,0.794327609607082,1.04479915655574,0,0,0,0,0.646413698057667,0.380046838912748,0,0,93.9845396720254,64.5818026963799,0,2.3108129580102,0.831173226792462,1.02084678131185,1.25559489221072,2.3440060335714,0.523523743973798,3.52938892818609,0,1.45653105909346,0.377690453926732,0.202753862439029,0.183546752161682,32.0780451182696,8.50298109883741,24.1654801007919,13.026803237977,8.53917171914711,17.2503077237966,1.17447824240415,1.45072428402269,2.01656279485478,8.48956138918625,12.3209379173665,40.2224231976405,25.4918740683093,23.8045940672415,38.0298842103708,20.3306719241479,11.5608323494448,22.9474427906757,23.7327927016074,42.628806896766,10.4860038681442,61.8591471567703,19.4936471139938,15.6606888464761,19.3498964443271,47.1324124266276,33.5720182246453,25.9680494335703,19.5524760877202,36.7687514644008,13.2139057199266,24.2605942361857,29.03163478543,37.3238194276449,20.767695097747,29.1711487511786,29.0350318961436,7.31591393041184,32.3932285286837,11.7851434189467,39.0098405389542,16.7759501242771,0.908714319998209,1.13357340160178,6.08715426273523,0.860423876981386,12.2394840067395,30.7630819233556,42.8852435515462,42.1145273871495,0.140444420131752,0,1.29893002301434,5.65343319216544,0.14084341977668,6.41632387071589,5.09610479413291,0,17.1027922398859,17.988550448732,23.7596489156948,0.5709193985953,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,0,0,1.1981512450592,3.59941638596045,2.28726408731516,0.299581278809645,0,0.125654352112864,0.521472960576829,0,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0.689706313300419,0.180062129805349,0,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0.51469581422943,3.40996199274711,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0.462801338662135,0,0,0.116765342367169,0.329119699826961,0.492502392237286,0,0,0,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0,0.569003702859245,0.228497025219458,0,0.407302655690628,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.144649058581512,135.712155545345,38.6173035511284,0.983528546038072,0,0,0.117211686592203,0,0,5.99465616890888,10.1514073517126,11.4174400798383,8.60287672629187,8.46634961513098,11.6061377623421,6.47697122679831,9.64444331107329,13.0444966722353,0,0.567760340833074,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0,0.535106452806212,0,0.913394847343798,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.477489376012546,0.328281799490123,1.1659233465194,0,0.341741761595705,0.619160603889667,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,1.18984900995699,0.559805809294632,1.52019971184866,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0,0.26175594198403,0.388844919875379,1.86401793926078,0.56369293868419,0.448549638131936,0.496375471371293,0.194451188344048,0.516639293910924,0.337912250981556,0.58678619322877,0.2604087696879,0.209718688851422,0.724752362478018,0.576060012515731,0.632022241256357,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.706765149637033,0.304827226619999,0.302478555410522,0,0.384847366561318,0.350630706544707,0.226730383615211,5.32766288097755,2.51198798506532,3.18980771091749,0.19318959403219,0,0.183151624267265,0.214368379079066,0,15.8130515932779,11.5081309126794,16.0410743763031,57.9145224498227,40.4198686664679,40.0358765616541,35.1011700120539,18.0128481289688,24.9228324941313,19.1571315348173,0.31136204275253,0,0.853668028770671,0.243106717068294,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.08461460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| |phase1_expression=0,0,0.454999239389536,0.90739263392049,0.500895729946347,0,0.467225281191051,1.93684985162364,1.68946466582,0.468129052643987,2.05461561870606,1.99430397488341,1.36960583944965,1.74840804837995,9.99329285446988,1.01237633694913,16.0899231969474,2.20823515750766,1.09691546884591,7.21462408056651,0.17008658030214,0.794327609607082,1.04479915655574,0,0,0,0,0.646413698057667,0.380046838912748,0,0,93.9845396720254,64.5818026963799,0,2.3108129580102,0.831173226792462,1.02084678131185,1.25559489221072,2.3440060335714,0.523523743973798,3.52938892818609,0,1.45653105909346,0.377690453926732,0.202753862439029,0.183546752161682,32.0780451182696,8.50298109883741,24.1654801007919,13.026803237977,8.53917171914711,17.2503077237966,1.17447824240415,1.45072428402269,2.01656279485478,8.48956138918625,12.3209379173665,40.2224231976405,25.4918740683093,23.8045940672415,38.0298842103708,20.3306719241479,11.5608323494448,22.9474427906757,23.7327927016074,42.628806896766,10.4860038681442,61.8591471567703,19.4936471139938,15.6606888464761,19.3498964443271,47.1324124266276,33.5720182246453,25.9680494335703,19.5524760877202,36.7687514644008,13.2139057199266,24.2605942361857,29.03163478543,37.3238194276449,20.767695097747,29.1711487511786,29.0350318961436,7.31591393041184,32.3932285286837,11.7851434189467,39.0098405389542,16.7759501242771,0.908714319998209,1.13357340160178,6.08715426273523,0.860423876981386,12.2394840067395,30.7630819233556,42.8852435515462,42.1145273871495,0.140444420131752,0,1.29893002301434,5.65343319216544,0.14084341977668,6.41632387071589,5.09610479413291,0,17.1027922398859,17.988550448732,23.7596489156948,0.5709193985953,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,0,0,1.1981512450592,3.59941638596045,2.28726408731516,0.299581278809645,0,0.125654352112864,0.521472960576829,0,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0.689706313300419,0.180062129805349,0,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0.51469581422943,3.40996199274711,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0.462801338662135,0,0,0.116765342367169,0.329119699826961,0.492502392237286,0,0,0,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0,0.569003702859245,0.228497025219458,0,0.407302655690628,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.144649058581512,135.712155545345,38.6173035511284,0.983528546038072,0,0,0.117211686592203,0,0,5.99465616890888,10.1514073517126,11.4174400798383,8.60287672629187,8.46634961513098,11.6061377623421,6.47697122679831,9.64444331107329,13.0444966722353,0,0.567760340833074,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0,0.535106452806212,0,0.913394847343798,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.477489376012546,0.328281799490123,1.1659233465194,0,0.341741761595705,0.619160603889667,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,1.18984900995699,0.559805809294632,1.52019971184866,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0,0.26175594198403,0.388844919875379,1.86401793926078,0.56369293868419,0.448549638131936,0.496375471371293,0.194451188344048,0.516639293910924,0.337912250981556,0.58678619322877,0.2604087696879,0.209718688851422,0.724752362478018,0.576060012515731,0.632022241256357,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.706765149637033,0.304827226619999,0.302478555410522,0,0.384847366561318,0.350630706544707,0.226730383615211,5.32766288097755,2.51198798506532,3.18980771091749,0.19318959403219,0,0.183151624267265,0.214368379079066,0,15.8130515932779,11.5081309126794,16.0410743763031,57.9145224498227,40.4198686664679,40.0358765616541,35.1011700120539,18.0128481289688,24.9228324941313,19.1571315348173,0.31136204275253,0,0.853668028770671,0.243106717068294,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.08461460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| ||
|short_description=p1@ENSMUST00000083007 | |short_description=p1@ENSMUST00000083007 | ||
}} | }} |
Latest revision as of 09:09, 6 August 2015
Short description: | p1@ENSMUST00000083007 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000083007_5end |
Coexpression cluster: | MCL_coexpression_mm9:896 |
Association with transcript: | 0bp_to_ENSMUST00000083007_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.99e-44 | 97 |
somatic stem cell | 2.32e-42 | 91 |
multi fate stem cell | 2.32e-42 | 91 |
embryonic cell | 2.52e-30 | 70 |
neural cell | 2.16e-29 | 43 |
ectodermal cell | 2.25e-28 | 44 |
neurectodermal cell | 2.25e-28 | 44 |
neuron | 5.37e-24 | 33 |
neuronal stem cell | 5.37e-24 | 33 |
neuroblast | 5.37e-24 | 33 |
electrically signaling cell | 5.37e-24 | 33 |
electrically responsive cell | 3.10e-23 | 39 |
electrically active cell | 3.10e-23 | 39 |
CNS neuron (sensu Vertebrata) | 3.84e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-20 | 23 |
motile cell | 3.84e-20 | 54 |
connective tissue cell | 2.23e-16 | 46 |
mesenchymal cell | 2.23e-16 | 46 |
hematopoietic lineage restricted progenitor cell | 6.59e-10 | 25 |
hematopoietic cell | 1.14e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.14e-09 | 32 |
hematopoietic stem cell | 1.14e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.14e-09 | 32 |
myeloid lineage restricted progenitor cell | 2.48e-08 | 13 |
common myeloid progenitor | 3.19e-08 | 19 |
myeloid cell | 3.67e-07 | 16 |
oligodendrocyte precursor cell | 5.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.56e-22 | 73 |
nervous system | 7.21e-22 | 75 |
gray matter | 1.16e-19 | 34 |
connective tissue | 2.23e-16 | 46 |
brain grey matter | 1.94e-15 | 29 |
regional part of telencephalon | 1.94e-15 | 29 |
telencephalon | 1.94e-15 | 29 |
ectoderm-derived structure | 2.67e-14 | 95 |
ectoderm | 2.67e-14 | 95 |
presumptive ectoderm | 2.67e-14 | 95 |
regional part of nervous system | 1.51e-13 | 54 |
cerebral cortex | 2.08e-12 | 21 |
cerebral hemisphere | 2.08e-12 | 21 |
pallium | 2.08e-12 | 21 |
regional part of cerebral cortex | 3.16e-11 | 17 |
neural tube | 3.65e-11 | 52 |
neural rod | 3.65e-11 | 52 |
future spinal cord | 3.65e-11 | 52 |
neural keel | 3.65e-11 | 52 |
occipital lobe | 1.71e-09 | 10 |
visual cortex | 1.71e-09 | 10 |
neocortex | 1.71e-09 | 10 |
regional part of forebrain | 2.62e-09 | 39 |
forebrain | 2.62e-09 | 39 |
future forebrain | 2.62e-09 | 39 |
neurectoderm | 2.83e-09 | 64 |
neural plate | 2.83e-09 | 64 |
presumptive neural plate | 2.83e-09 | 64 |
anterior neural tube | 7.05e-09 | 40 |
regional part of brain | 2.06e-08 | 46 |
bone marrow | 2.29e-08 | 16 |
brain | 4.66e-08 | 47 |
future brain | 4.66e-08 | 47 |
ecto-epithelium | 7.28e-07 | 73 |