FFCP PHASE1:Mm9::chr4:66065546..66065561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56079 | |EntrezGene=56079 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8T4,Q80Z10 | |UniProt=E9Q8T4,Q80Z10 | ||
|association_with_transcript=-29bp_to_ENSMUST00000084496,NM_019514,NM_207109,uc008thn.1,uc008tho.1,uc008thp.1,uc008ths.1,uc008tht.1,uc008thu.1_5end | |association_with_transcript=-29bp_to_ENSMUST00000084496,NM_019514,NM_207109,uc008thn.1,uc008tho.1,uc008thp.1,uc008ths.1,uc008tht.1,uc008thu.1_5end | ||
|cluster_id=chr4:66065546..66065561,- | |||
|description=CAGE_peak_3_at_Astn2_5end | |description=CAGE_peak_3_at_Astn2_5end | ||
|id=chr4:66065546..66065561,- | |id=chr4:66065546..66065561,- | ||
|ontology_enrichment_celltype=CL:0000221!6.07e-13!44;CL:0000133!6.07e-13!44;CL:0002319!8.95e-13!43;CL:0000540!1.90e-10!33;CL:0000047!1.90e-10!33;CL:0000031!1.90e-10!33;CL:0000404!1.90e-10!33;CL:0000117!3.16e-10!23;CL:0000337!3.16e-10!23;CL:0000055!1.98e-09!50;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.99e-17,43;CL:0000221,2.37e-16,44;CL:0000133,2.37e-16,44;CL:0000117,1.90e-13,23;CL:0000337,1.90e-13,23;CL:0000540,2.00e-13,33;CL:0000047,2.00e-13,33;CL:0000031,2.00e-13,33;CL:0000404,2.00e-13,33;CL:0000393,2.66e-10,39;CL:0000211,2.66e-10,39;CL:0002321,4.21e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.81e-30!75;UBERON:0001016!6.81e-30!75;UBERON:0001017!2.20e-29!73;UBERON:0005743!2.20e-29!73;UBERON:0004121!1.33e-22!102;UBERON:0000924!1.33e-22!102;UBERON:0006601!1.33e-22!102;UBERON:0001049!1.54e-22!52;UBERON:0005068!1.54e-22!52;UBERON:0006241!1.54e-22!52;UBERON:0007135!1.54e-22!52;UBERON:0000955!3.69e-21!50;UBERON:0006238!3.69e-21!50;UBERON:0002616!1.68e-20!49;UBERON:0002346!4.79e-19!71;UBERON:0003075!4.79e-19!71;UBERON:0007284!4.79e-19!71;UBERON:0000033!5.89e-18!63;UBERON:0003080!3.24e-16!40;UBERON:0002020!6.24e-16!34;UBERON:0002780!1.68e-15!39;UBERON:0001890!1.68e-15!39;UBERON:0006240!1.68e-15!39;UBERON:0003056!2.39e-14!49;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0000153!2.27e-10!94;UBERON:0007811!1.42e-09!86;UBERON:0000025!1.40e-08!114;UBERON:0000956!2.56e-08!21;UBERON:0001869!2.56e-08!21;UBERON:0000203!2.56e-08!21;UBERON:0002619!2.64e-08!17;UBERON:0004111!8.20e-08!122;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10;UBERON:0003076!4.99e-07!12;UBERON:0003057!4.99e-07!12;UBERON:0000468!5.28e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.22e-43,73;UBERON:0001016,6.06e-43,75;UBERON:0000073,4.80e-35,54;UBERON:0001049,1.82e-32,52;UBERON:0005068,1.82e-32,52;UBERON:0006241,1.82e-32,52;UBERON:0007135,1.82e-32,52;UBERON:0004121,3.62e-30,95;UBERON:0000924,3.62e-30,95;UBERON:0006601,3.62e-30,95;UBERON:0000955,1.16e-26,47;UBERON:0006238,1.16e-26,47;UBERON:0002616,1.41e-25,46;UBERON:0002346,4.09e-25,64;UBERON:0003075,4.09e-25,64;UBERON:0007284,4.09e-25,64;UBERON:0002020,6.78e-22,34;UBERON:0003080,4.96e-21,40;UBERON:0010371,2.48e-20,73;UBERON:0002780,7.41e-20,39;UBERON:0001890,7.41e-20,39;UBERON:0006240,7.41e-20,39;UBERON:0003528,2.35e-16,29;UBERON:0002791,2.35e-16,29;UBERON:0001893,2.35e-16,29;UBERON:0003056,2.28e-15,49;UBERON:0010314,2.04e-13,92;UBERON:0003076,4.16e-12,12;UBERON:0003057,4.16e-12,12;UBERON:0002021,4.98e-12,10;UBERON:0000411,4.98e-12,10;UBERON:0001950,4.98e-12,10;UBERON:0002619,1.02e-11,17;UBERON:0000025,4.91e-11,114;UBERON:0000956,2.34e-10,21;UBERON:0001869,2.34e-10,21;UBERON:0000203,2.34e-10,21;UBERON:0004111,1.86e-09,122;UBERON:0011216,2.55e-09,194;UBERON:0002240,3.71e-08,6;UBERON:0005174,3.71e-08,6;UBERON:0001137,3.71e-08,6;UBERON:0002420,1.66e-07,8;UBERON:0007245,1.66e-07,8;UBERON:0010009,1.66e-07,8;UBERON:0010011,1.66e-07,8;UBERON:0000454,1.66e-07,8;UBERON:0001948,2.89e-07,5;UBERON:0002315,2.89e-07,5 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,2.8343270329458,1.97717564461025,2.3331587888914,0.279972843250725,2.87505128729943,0,0,0,0,0,0,4.04632921719196,3.1739458756322,2.53532561402472,0,0,0,0,0,1.79760066311043,1.53687322128622,0.518448061542388,0.135005938331691,0.420649922702764,3.71346279724945,3.97563373712904,0.734944795289724,0.766763768145891,0,5.50579404996943,3.19218345212969,3.07213066512487,3.03338461779446,2.56165402086747,3.12548022334056,3.35019598801657,5.06486349028512,3.51435969886663,3.83017161115768,3.70166370077668,2.79599168737951,0.530083353332288,1.13357340160178,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.904335843315735,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0,0,0,13.1751358655196,13.6140359428746,0,0,0,0,4.34392854273986,0.915001205637253,2.63874139437015,3.82413504423008,3.06858548796397,3.32460871295296,3.73154905055843,0.81471491080253,0.124406970610093,0,0,0.260240885925407,0,0.720248519221397,0.452114453507145,0.612328492361951,0.384341160854549,0.655912071918102,0.258703370739016,0,1.13463648100692,1.75951124163949,0.657587197282725,0.834141747676794,1.39300866608867,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0.268273401399619,0.583826711835847,0,0,0.324275238183423,0.146199987425332,0,0,2.94405927989778,1.13195073617213,0,0,0.639864751605702,0,0.515469845288373,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.795825888164603,0,0,0.216138049874694,0,0,0,0,0.610953983535943,0.193952487167626,0.420814919341911,0.379419222745544,0.147610147979602,0.31399745568275,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,1.29327233116623,0.37898282354097,0.325929952884052,0.509235257325564,0.469380496577004,0.837531287209079,0.714130922658041,1.17080188714679,0.945810864637146,0.8858587585951,1.2756381492599,0.327726629431476,1.20879487306127,0.578596234326046,0,0,0,0,2.56880943980467,2.57865710502847,0,0,0.315508219416257,0,1.29254038639679,0.477937595905104,1.33679204449436,2.26461224631066,0,1.16902343164525,2.37172666767914,3.21321316421807,0.425820255624806,0.534196811001766,0.488660878060728,1.64970122972535,0,0.728341908464944,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0.948110273807448,0,0,0,0.720244376125241,0.776152102696527,1.71469628025274,1.24138163549592,1.60531935841864,1.81003922662333,1.522324745573,0,0,0.220528398054962,0,0.484393280087717,0.482503399425247,0.238744688006273,0,0.291480836629851,2.59595422814714,0.512612642393558,0.206386867963223,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,0.648032044930808,0,0,0.539457385539283,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.645799117388655,0.337912250981556,0.117357238645754,0.39061315453185,0,0,0,0,1.01362607645082,1.1298205288131,0.129920822977795,0.716106782669926,0,0.120195449519969,0.295379054349154,0,0,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0.214368379079066,0,3.3885110557024,1.38097570952153,3.43737308063638,3.95262319390481,3.42541259885321,3.7769694869485,2.70009000092722,3.60256962579376,1.81256963593682,6.21312374102184,0,1.99512436700516,1.02440163452481,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,1.77435509923168,0.565879024158229,0.468207537349412,1.08842759088278,0.746661096422973,0.476293691283074,1.15884325944855,0.578727661391115,0,1.03039244094078,0.342869252385415,1.95223386775271,0.238436189947321,1.0174249164263,0.658765662907314,0.846146078916765,0.914639864363863,0.526139422875686,1.08643291076689,1.12228454331548,0.830445126869219,0.591026894253381,0.818462086339379,0.929621047115796,0.578719832943424,1.24905288968973,1.40358965067245,1.07435527024149,0.956441660344217,0.220591419119515,0.695603506861264 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,2.8343270329458,1.97717564461025,2.3331587888914,0.279972843250725,2.87505128729943,0,0,0,0,0,0,4.04632921719196,3.1739458756322,2.53532561402472,0,0,0,0,0,1.79760066311043,1.53687322128622,0.518448061542388,0.135005938331691,0.420649922702764,3.71346279724945,3.97563373712904,0.734944795289724,0.766763768145891,0,5.50579404996943,3.19218345212969,3.07213066512487,3.03338461779446,2.56165402086747,3.12548022334056,3.35019598801657,5.06486349028512,3.51435969886663,3.83017161115768,3.70166370077668,2.79599168737951,0.530083353332288,1.13357340160178,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.904335843315735,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0,0,0,13.1751358655196,13.6140359428746,0,0,0,0,4.34392854273986,0.915001205637253,2.63874139437015,3.82413504423008,3.06858548796397,3.32460871295296,3.73154905055843,0.81471491080253,0.124406970610093,0,0,0.260240885925407,0,0.720248519221397,0.452114453507145,0.612328492361951,0.384341160854549,0.655912071918102,0.258703370739016,0,1.13463648100692,1.75951124163949,0.657587197282725,0.834141747676794,1.39300866608867,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0.268273401399619,0.583826711835847,0,0,0.324275238183423,0.146199987425332,0,0,2.94405927989778,1.13195073617213,0,0,0.639864751605702,0,0.515469845288373,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.795825888164603,0,0,0.216138049874694,0,0,0,0,0.610953983535943,0.193952487167626,0.420814919341911,0.379419222745544,0.147610147979602,0.31399745568275,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,1.29327233116623,0.37898282354097,0.325929952884052,0.509235257325564,0.469380496577004,0.837531287209079,0.714130922658041,1.17080188714679,0.945810864637146,0.8858587585951,1.2756381492599,0.327726629431476,1.20879487306127,0.578596234326046,0,0,0,0,2.56880943980467,2.57865710502847,0,0,0.315508219416257,0,1.29254038639679,0.477937595905104,1.33679204449436,2.26461224631066,0,1.16902343164525,2.37172666767914,3.21321316421807,0.425820255624806,0.534196811001766,0.488660878060728,1.64970122972535,0,0.728341908464944,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0.948110273807448,0,0,0,0.720244376125241,0.776152102696527,1.71469628025274,1.24138163549592,1.60531935841864,1.81003922662333,1.522324745573,0,0,0.220528398054962,0,0.484393280087717,0.482503399425247,0.238744688006273,0,0.291480836629851,2.59595422814714,0.512612642393558,0.206386867963223,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,0.648032044930808,0,0,0.539457385539283,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.645799117388655,0.337912250981556,0.117357238645754,0.39061315453185,0,0,0,0,1.01362607645082,1.1298205288131,0.129920822977795,0.716106782669926,0,0.120195449519969,0.295379054349154,0,0,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0.214368379079066,0,3.3885110557024,1.38097570952153,3.43737308063638,3.95262319390481,3.42541259885321,3.7769694869485,2.70009000092722,3.60256962579376,1.81256963593682,6.21312374102184,0,1.99512436700516,1.02440163452481,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,1.77435509923168,0.565879024158229,0.468207537349412,1.08842759088278,0.746661096422973,0.476293691283074,1.15884325944855,0.578727661391115,0,1.03039244094078,0.342869252385415,1.95223386775271,0.238436189947321,1.0174249164263,0.658765662907314,0.846146078916765,0.914639864363863,0.526139422875686,1.08643291076689,1.12228454331548,0.830445126869219,0.591026894253381,0.818462086339379,0.929621047115796,0.578719832943424,1.24905288968973,1.40358965067245,1.07435527024149,0.956441660344217,0.220591419119515,0.695603506861264 | ||
|short_description=p3@Astn2 | |short_description=p3@Astn2 | ||
}} | }} |
Latest revision as of 04:53, 27 September 2015
Short description: | p3@Astn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Astn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -29bp_to_ENSMUST00000084496, NM_019514, NM_207109, uc008thn.1, uc008tho.1, uc008thp.1, uc008ths.1, uc008tht.1, uc008thu.1_5end |
EntrezGene: | Astn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.99e-17 | 43 |
ectodermal cell | 2.37e-16 | 44 |
neurectodermal cell | 2.37e-16 | 44 |
CNS neuron (sensu Vertebrata) | 1.90e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.90e-13 | 23 |
neuron | 2.00e-13 | 33 |
neuronal stem cell | 2.00e-13 | 33 |
neuroblast | 2.00e-13 | 33 |
electrically signaling cell | 2.00e-13 | 33 |
electrically responsive cell | 2.66e-10 | 39 |
electrically active cell | 2.66e-10 | 39 |
embryonic cell | 4.21e-07 | 70 |