FFCP PHASE1:Mm9::chr2:179777403..179777412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269397 | |EntrezGene=269397 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW22 | |UniProt=Q8BW22 | ||
|association_with_transcript=189bp_to_ENSMUST00000041126_5end | |association_with_transcript=189bp_to_ENSMUST00000041126_5end | ||
|cluster_id=chr2:179777403..179777412,+ | |||
|description=CAGE_peak_5_at_Ss18l1_5end | |description=CAGE_peak_5_at_Ss18l1_5end | ||
|id=chr2:179777403..179777412,+ | |id=chr2:179777403..179777412,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.82e-19!23;CL:0000337!3.82e-19!23;CL:0000540!3.84e-12!33;CL:0000047!3.84e-12!33;CL:0000031!3.84e-12!33;CL:0000404!3.84e-12!33;CL:0000221!4.44e-10!44;CL:0000133!4.44e-10!44;CL:0000393!4.81e-10!39;CL:0000211!4.81e-10!39;CL:0002319!9.28e-10!43;CL:0000055!5.65e-08!50 | |ontology_enrichment_celltype=CL:0000117!3.82e-19!23;CL:0000337!3.82e-19!23;CL:0000540!3.84e-12!33;CL:0000047!3.84e-12!33;CL:0000031!3.84e-12!33;CL:0000404!3.84e-12!33;CL:0000221!4.44e-10!44;CL:0000133!4.44e-10!44;CL:0000393!4.81e-10!39;CL:0000211!4.81e-10!39;CL:0002319!9.28e-10!43;CL:0000055!5.65e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-43,23;CL:0000337,1.33e-43,23;CL:0000540,5.70e-29,33;CL:0000047,5.70e-29,33;CL:0000031,5.70e-29,33;CL:0000404,5.70e-29,33;CL:0000393,8.60e-24,39;CL:0000211,8.60e-24,39;CL:0002319,3.83e-21,43;CL:0000221,1.48e-20,44;CL:0000133,1.48e-20,44;CL:0002609,2.79e-16,6;CL:0002321,3.38e-11,70;CL:0002613,1.77e-09,3;CL:0000120,2.01e-09,3;CL:0002608,5.10e-09,3;CL:0002612,1.05e-08,3;CL:0000723,1.42e-07,91;CL:0000048,1.42e-07,91;CL:0000034,7.84e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.12e-22!34;UBERON:0001049!1.70e-20!52;UBERON:0005068!1.70e-20!52;UBERON:0006241!1.70e-20!52;UBERON:0007135!1.70e-20!52;UBERON:0001017!1.98e-19!73;UBERON:0005743!1.98e-19!73;UBERON:0000073!5.23e-19!75;UBERON:0001016!5.23e-19!75;UBERON:0000033!1.95e-18!63;UBERON:0000955!2.05e-18!50;UBERON:0006238!2.05e-18!50;UBERON:0002616!5.32e-18!49;UBERON:0002791!1.10e-17!29;UBERON:0003528!1.10e-17!29;UBERON:0001893!1.10e-17!29;UBERON:0002346!1.32e-17!71;UBERON:0003075!1.32e-17!71;UBERON:0007284!1.32e-17!71;UBERON:0004121!9.19e-17!102;UBERON:0000924!9.19e-17!102;UBERON:0006601!9.19e-17!102;UBERON:0003080!7.38e-16!40;UBERON:0003056!2.81e-15!49;UBERON:0002780!3.67e-15!39;UBERON:0001890!3.67e-15!39;UBERON:0006240!3.67e-15!39;UBERON:0007811!5.68e-12!86;UBERON:0000956!1.23e-11!21;UBERON:0001869!1.23e-11!21;UBERON:0000203!1.23e-11!21;UBERON:0000153!1.37e-10!94;UBERON:0002619!1.07e-08!17;UBERON:0002420!2.01e-07!8;UBERON:0007245!2.01e-07!8;UBERON:0010009!2.01e-07!8;UBERON:0010011!2.01e-07!8;UBERON:0000454!2.01e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.79e-40,34;UBERON:0000073,2.97e-30,54;UBERON:0003528,2.75e-29,29;UBERON:0002791,2.75e-29,29;UBERON:0001893,2.75e-29,29;UBERON:0001017,3.45e-27,73;UBERON:0001049,6.99e-27,52;UBERON:0005068,6.99e-27,52;UBERON:0006241,6.99e-27,52;UBERON:0007135,6.99e-27,52;UBERON:0001016,2.68e-26,75;UBERON:0003080,2.51e-22,40;UBERON:0002346,8.50e-21,64;UBERON:0003075,8.50e-21,64;UBERON:0007284,8.50e-21,64;UBERON:0002780,1.21e-20,39;UBERON:0001890,1.21e-20,39;UBERON:0006240,1.21e-20,39;UBERON:0004121,1.90e-19,95;UBERON:0000924,1.90e-19,95;UBERON:0006601,1.90e-19,95;UBERON:0002616,8.22e-19,46;UBERON:0000956,1.70e-18,21;UBERON:0001869,1.70e-18,21;UBERON:0000203,1.70e-18,21;UBERON:0000955,2.59e-18,47;UBERON:0006238,2.59e-18,47;UBERON:0010371,1.52e-17,73;UBERON:0003056,2.23e-17,49;UBERON:0000369,4.18e-14,5;UBERON:0002435,4.18e-14,5;UBERON:0000204,4.18e-14,5;UBERON:0010082,4.18e-14,5;UBERON:0001948,2.87e-13,5;UBERON:0002315,2.87e-13,5;UBERON:0010314,9.02e-13,92;UBERON:0002420,4.34e-12,8;UBERON:0007245,4.34e-12,8;UBERON:0010009,4.34e-12,8;UBERON:0010011,4.34e-12,8;UBERON:0000454,4.34e-12,8;UBERON:0002619,4.96e-11,17;UBERON:0002240,5.31e-11,6;UBERON:0005174,5.31e-11,6;UBERON:0001137,5.31e-11,6;UBERON:0001954,1.19e-09,7;UBERON:0003022,1.19e-09,7;UBERON:0002421,1.19e-09,7;UBERON:0000349,1.19e-09,7;UBERON:0002600,1.19e-09,7;UBERON:0000025,3.08e-09,114;UBERON:0002257,1.05e-08,3;UBERON:0004111,2.85e-08,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,3.23706337375356,4.23192783417626,5.07065122804943,0,0,0,0,0,0,0.384218305321555,2.38486108309499,3.64516033495565,2.94454945891935,2.57085885963423,2.20868540951614,2.81728838194394,3.06705507258356,3.67687514644008,1.10115880999389,0.510749352340751,1.38245879930619,4.74790635828698,5.58074625974699,3.12548022334056,0.558365998002762,2.25105044012672,0.916789486660861,2.06240009831567,3.55929201997757,2.79599168737951,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0.127070227073065,1.49790639404823,1.37250180845588,4.64921102817598,1.04294592115366,0.767146371990992,0.62336413367868,0.811206315338788,0.203678727700633,0,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.748401490664606,0.12811372028485,0.281105173679186,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,1.26173969138476,4.83651678182637,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0.820481806145422,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,1.55328093525546,0,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,1.11123363900808,0.618105171716683,0.320919209591815,0,0.25347929989024,0.565879024158229,0.187283014939765,0.640251524048693,1.03383844120104,0,0.579421629724277,0.77163688185482,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,1.46342378298218,0,0.271608227691724,1.12228454331548,0.593175090620871,0.29551344712669,0.409231043169689,0.77468420592983,0.771626443924566,1.74867404556562,0,0.429742108096597,0,0.220591419119515,0.231867835620421 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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,3.23706337375356,4.23192783417626,5.07065122804943,0,0,0,0,0,0,0.384218305321555,2.38486108309499,3.64516033495565,2.94454945891935,2.57085885963423,2.20868540951614,2.81728838194394,3.06705507258356,3.67687514644008,1.10115880999389,0.510749352340751,1.38245879930619,4.74790635828698,5.58074625974699,3.12548022334056,0.558365998002762,2.25105044012672,0.916789486660861,2.06240009831567,3.55929201997757,2.79599168737951,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0.127070227073065,1.49790639404823,1.37250180845588,4.64921102817598,1.04294592115366,0.767146371990992,0.62336413367868,0.811206315338788,0.203678727700633,0,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.748401490664606,0.12811372028485,0.281105173679186,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,1.26173969138476,4.83651678182637,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0.820481806145422,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,1.55328093525546,0,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,1.11123363900808,0.618105171716683,0.320919209591815,0,0.25347929989024,0.565879024158229,0.187283014939765,0.640251524048693,1.03383844120104,0,0.579421629724277,0.77163688185482,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,1.46342378298218,0,0.271608227691724,1.12228454331548,0.593175090620871,0.29551344712669,0.409231043169689,0.77468420592983,0.771626443924566,1.74867404556562,0,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p5@Ss18l1 | |short_description=p5@Ss18l1 | ||
}} | }} |
Latest revision as of 07:17, 26 September 2015
Short description: | p5@Ss18l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ss18l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 189bp_to_ENSMUST00000041126_5end |
EntrezGene: | Ss18l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.33e-43 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-43 | 23 |
neuron | 5.70e-29 | 33 |
neuronal stem cell | 5.70e-29 | 33 |
neuroblast | 5.70e-29 | 33 |
electrically signaling cell | 5.70e-29 | 33 |
electrically responsive cell | 8.60e-24 | 39 |
electrically active cell | 8.60e-24 | 39 |
neural cell | 3.83e-21 | 43 |
ectodermal cell | 1.48e-20 | 44 |
neurectodermal cell | 1.48e-20 | 44 |
neuron of cerebral cortex | 2.79e-16 | 6 |
embryonic cell | 3.38e-11 | 70 |
striatum neuron | 1.77e-09 | 3 |
granule cell | 2.01e-09 | 3 |
hippocampal neuron | 5.10e-09 | 3 |
neuron of the ventral spinal cord | 1.05e-08 | 3 |
somatic stem cell | 1.42e-07 | 91 |
multi fate stem cell | 1.42e-07 | 91 |
stem cell | 7.84e-07 | 97 |