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FFCP PHASE1:Mm9::chr4:119165152..119165166,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=194237
|EntrezGene=194237
|HGNC=
|HGNC=
|MCL_coexpression_id=464
|TSSclassifier=NA
|UniProt=Q6PFX8
|UniProt=Q6PFX8
|association_with_transcript=36bp_to_NM_177572,uc008umo.2_5end
|association_with_transcript=36bp_to_NM_177572,uc008umo.2_5end
|cluster_id=chr4:119165152..119165166,-
|description=CAGE_peak_2_at_Rimkla_5end
|description=CAGE_peak_2_at_Rimkla_5end
|id=chr4:119165152..119165166,-
|id=chr4:119165152..119165166,-
|ontology_enrichment_celltype=CL:0000117!7.43e-17!23;CL:0000337!7.43e-17!23;CL:0000540!4.68e-16!33;CL:0000047!4.68e-16!33;CL:0000031!4.68e-16!33;CL:0000404!4.68e-16!33;CL:0000393!6.16e-12!39;CL:0000211!6.16e-12!39;CL:0000221!6.12e-10!44;CL:0000133!6.12e-10!44;CL:0002319!1.58e-09!43;CL:0000055!7.72e-07!50
|ontology_enrichment_celltype=CL:0000117!7.43e-17!23;CL:0000337!7.43e-17!23;CL:0000540!4.68e-16!33;CL:0000047!4.68e-16!33;CL:0000031!4.68e-16!33;CL:0000404!4.68e-16!33;CL:0000393!6.16e-12!39;CL:0000211!6.16e-12!39;CL:0000221!6.12e-10!44;CL:0000133!6.12e-10!44;CL:0002319!1.58e-09!43;CL:0000055!7.72e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.27e-34,23;CL:0000337,2.27e-34,23;CL:0000540,7.98e-22,33;CL:0000047,7.98e-22,33;CL:0000031,7.98e-22,33;CL:0000404,7.98e-22,33;CL:0000393,2.05e-17,39;CL:0000211,2.05e-17,39;CL:0000221,5.39e-16,44;CL:0000133,5.39e-16,44;CL:0002319,3.61e-15,43;CL:0002609,4.64e-09,6;CL:0002321,1.28e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.51e-24!73;UBERON:0005743!1.51e-24!73;UBERON:0002346!1.71e-24!71;UBERON:0003075!1.71e-24!71;UBERON:0007284!1.71e-24!71;UBERON:0000073!7.22e-24!75;UBERON:0001016!7.22e-24!75;UBERON:0000033!2.02e-22!63;UBERON:0001049!3.72e-22!52;UBERON:0005068!3.72e-22!52;UBERON:0006241!3.72e-22!52;UBERON:0007135!3.72e-22!52;UBERON:0004121!4.19e-22!102;UBERON:0000924!4.19e-22!102;UBERON:0006601!4.19e-22!102;UBERON:0000955!3.29e-20!50;UBERON:0006238!3.29e-20!50;UBERON:0002616!9.41e-20!49;UBERON:0003056!2.73e-19!49;UBERON:0002020!1.16e-16!34;UBERON:0003080!1.77e-16!40;UBERON:0002780!9.32e-16!39;UBERON:0001890!9.32e-16!39;UBERON:0006240!9.32e-16!39;UBERON:0002791!6.50e-13!29;UBERON:0003528!6.50e-13!29;UBERON:0001893!6.50e-13!29;UBERON:0007811!2.68e-12!86;UBERON:0000153!3.48e-10!94;UBERON:0000956!4.66e-08!21;UBERON:0001869!4.66e-08!21;UBERON:0000203!4.66e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.20e-38,54;UBERON:0001049,5.11e-35,52;UBERON:0005068,5.11e-35,52;UBERON:0006241,5.11e-35,52;UBERON:0007135,5.11e-35,52;UBERON:0001017,9.70e-33,73;UBERON:0002346,6.60e-32,64;UBERON:0003075,6.60e-32,64;UBERON:0007284,6.60e-32,64;UBERON:0001016,1.49e-31,75;UBERON:0010371,4.55e-28,73;UBERON:0004121,4.75e-28,95;UBERON:0000924,4.75e-28,95;UBERON:0006601,4.75e-28,95;UBERON:0002616,7.28e-26,46;UBERON:0000955,4.00e-25,47;UBERON:0006238,4.00e-25,47;UBERON:0002020,2.93e-24,34;UBERON:0003080,3.15e-22,40;UBERON:0003056,1.40e-21,49;UBERON:0010314,3.10e-21,92;UBERON:0002780,7.13e-21,39;UBERON:0001890,7.13e-21,39;UBERON:0006240,7.13e-21,39;UBERON:0003528,4.88e-17,29;UBERON:0002791,4.88e-17,29;UBERON:0001893,4.88e-17,29;UBERON:0003076,1.67e-13,12;UBERON:0003057,1.67e-13,12;UBERON:0002420,4.65e-12,8;UBERON:0007245,4.65e-12,8;UBERON:0010009,4.65e-12,8;UBERON:0010011,4.65e-12,8;UBERON:0000454,4.65e-12,8;UBERON:0002240,2.83e-11,6;UBERON:0005174,2.83e-11,6;UBERON:0001137,2.83e-11,6;UBERON:0000025,2.87e-11,114;UBERON:0004111,1.34e-10,122;UBERON:0001948,1.49e-09,5;UBERON:0002315,1.49e-09,5;UBERON:0000956,3.87e-08,21;UBERON:0001869,3.87e-08,21;UBERON:0000203,3.87e-08,21;UBERON:0000369,9.27e-08,5;UBERON:0002435,9.27e-08,5;UBERON:0000204,9.27e-08,5;UBERON:0010082,9.27e-08,5;UBERON:0002950,2.09e-07,4;UBERON:0001891,2.09e-07,4;UBERON:0009616,2.09e-07,4;UBERON:0010286,2.09e-07,4
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.22548106945558,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,1.76272340924412,2.02508907497536,1.47227472945967,13.139945282575,8.39300455616131,3.30725157880376,3.25874601462004,3.67687514644008,7.70811166995721,6.89511625660014,6.91229399653096,2.76961204233407,2.65314166446988,1.04182674111352,8.93385596804419,2.25105044012672,4.12555268997387,9.42811473515737,5.41012387036591,3.91438836233131,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,2.30391377494801,0.255457055208591,0,0.599902730993408,0,5.24267237916879,2.28750301409313,4.02093926761166,2.43354048269187,1.27857728665165,4.77912502486988,5.19172041816825,0.101839363850316,0,0,1.47309299120532,0,0.689706313300419,1.98068342785884,0.753524089178575,0.816437989815934,0.768682321709099,0.937017245597288,3.62184719034622,0,0.378212160335639,0,0.219195732427575,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,1.87791380979733,0.934122738937356,0.329119699826961,0.656669856316381,0.162137619091711,0.146199987425332,0,0,2.10289948564127,2.36680608472354,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.350679099451593,0.126473074248515,0.147610147979602,0.784993639206874,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.339490171550376,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,9.9541365792431,12.6588621519579,0,0,0.631016438832513,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.425820255624806,0.534196811001766,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,2.38307724027652,0.720244376125241,0.258717367565509,0.214337035031592,1.77340233642274,1.24858172321449,1.31639216481697,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,16.3174265769249,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,1.36317147753424,0,0.576060012515731,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0.201652370273681,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.920650473014354,2.29158205375759,0.859265911718438,1.37016503954128,0.755393897389701,2.70009000092722,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,0.399024873401031,0.341467211508268,0.729320151204882,1.46729213839588,1.2869045591501,0.44449345560323,1.44224540067226,0.962757628775446,0.758091635291392,0.50695859978048,0.943131706930381,0.655490552289177,0.832326981263301,0.631790158511746,1.90517476513229,0.463537303779422,0.964546102318525,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,1.0174249164263,0.941093804153306,0.846146078916765,0.73171189149109,1.31534855718921,0.543216455383447,0,0.711810108745045,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,1.16965804222704,0.429742108096597,0.57386499620653,0.441182838239031,1.62307484934295
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.22548106945558,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,1.76272340924412,2.02508907497536,1.47227472945967,13.139945282575,8.39300455616131,3.30725157880376,3.25874601462004,3.67687514644008,7.70811166995721,6.89511625660014,6.91229399653096,2.76961204233407,2.65314166446988,1.04182674111352,8.93385596804419,2.25105044012672,4.12555268997387,9.42811473515737,5.41012387036591,3.91438836233131,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,2.30391377494801,0.255457055208591,0,0.599902730993408,0,5.24267237916879,2.28750301409313,4.02093926761166,2.43354048269187,1.27857728665165,4.77912502486988,5.19172041816825,0.101839363850316,0,0,1.47309299120532,0,0.689706313300419,1.98068342785884,0.753524089178575,0.816437989815934,0.768682321709099,0.937017245597288,3.62184719034622,0,0.378212160335639,0,0.219195732427575,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,1.87791380979733,0.934122738937356,0.329119699826961,0.656669856316381,0.162137619091711,0.146199987425332,0,0,2.10289948564127,2.36680608472354,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.350679099451593,0.126473074248515,0.147610147979602,0.784993639206874,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.339490171550376,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,9.9541365792431,12.6588621519579,0,0,0.631016438832513,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.425820255624806,0.534196811001766,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,2.38307724027652,0.720244376125241,0.258717367565509,0.214337035031592,1.77340233642274,1.24858172321449,1.31639216481697,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,16.3174265769249,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,1.36317147753424,0,0.576060012515731,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0.201652370273681,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.920650473014354,2.29158205375759,0.859265911718438,1.37016503954128,0.755393897389701,2.70009000092722,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,0.399024873401031,0.341467211508268,0.729320151204882,1.46729213839588,1.2869045591501,0.44449345560323,1.44224540067226,0.962757628775446,0.758091635291392,0.50695859978048,0.943131706930381,0.655490552289177,0.832326981263301,0.631790158511746,1.90517476513229,0.463537303779422,0.964546102318525,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,1.0174249164263,0.941093804153306,0.846146078916765,0.73171189149109,1.31534855718921,0.543216455383447,0,0.711810108745045,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,1.16965804222704,0.429742108096597,0.57386499620653,0.441182838239031,1.62307484934295
|short_description=p2@Rimkla
|short_description=p2@Rimkla
}}
}}

Latest revision as of 06:32, 26 September 2015

Short description:p2@Rimkla
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rimkla_5end
Coexpression cluster:MCL_coexpression_mm9:464
Association with transcript: 36bp_to_NM_177572, uc008umo.2_5end
EntrezGene:Rimkla
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rimkla

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A312.66
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C916.32
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.20e-3854
neural tube5.11e-3552
neural rod5.11e-3552
future spinal cord5.11e-3552
neural keel5.11e-3552
central nervous system9.70e-3373
neurectoderm6.60e-3264
neural plate6.60e-3264
presumptive neural plate6.60e-3264
nervous system1.49e-3175
ecto-epithelium4.55e-2873
ectoderm-derived structure4.75e-2895
ectoderm4.75e-2895
presumptive ectoderm4.75e-2895
regional part of brain7.28e-2646
brain4.00e-2547
future brain4.00e-2547
gray matter2.93e-2434
anterior neural tube3.15e-2240
pre-chordal neural plate1.40e-2149
structure with developmental contribution from neural crest3.10e-2192
regional part of forebrain7.13e-2139
forebrain7.13e-2139
future forebrain7.13e-2139
brain grey matter4.88e-1729
regional part of telencephalon4.88e-1729
telencephalon4.88e-1729
posterior neural tube1.67e-1312
chordal neural plate1.67e-1312
basal ganglion4.65e-128
nuclear complex of neuraxis4.65e-128
aggregate regional part of brain4.65e-128
collection of basal ganglia4.65e-128
cerebral subcortex4.65e-128
spinal cord2.83e-116
dorsal region element2.83e-116
dorsum2.83e-116
tube2.87e-11114
anatomical conduit1.34e-10122
regional part of spinal cord1.49e-095
gray matter of spinal cord1.49e-095
cerebral cortex3.87e-0821
cerebral hemisphere3.87e-0821
pallium3.87e-0821
corpus striatum9.27e-085
striatum9.27e-085
ventral part of telencephalon9.27e-085
future corpus striatum9.27e-085
regional part of midbrain2.09e-074
midbrain2.09e-074
presumptive midbrain2.09e-074
midbrain neural tube2.09e-074
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