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FFCP PHASE1:Mm9::chr7:31088488..31088501,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76686
|EntrezGene=76686
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-419bp_to_ENSMUST00000132844_5end
|association_with_transcript=-419bp_to_ENSMUST00000132844_5end
|cluster_id=chr7:31088488..31088501,+
|description=CAGE_peak_8_at_Clip3_5end
|description=CAGE_peak_8_at_Clip3_5end
|id=chr7:31088488..31088501,+
|id=chr7:31088488..31088501,+
|ontology_enrichment_celltype=CL:0002319!8.44e-16!43;CL:0000117!3.58e-15!23;CL:0000337!3.58e-15!23;CL:0000221!5.19e-15!44;CL:0000133!5.19e-15!44;CL:0000540!2.89e-14!33;CL:0000047!2.89e-14!33;CL:0000031!2.89e-14!33;CL:0000404!2.89e-14!33;CL:0000055!8.73e-14!50;CL:0000393!1.09e-12!39;CL:0000211!1.09e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-30,23;CL:0000337,1.35e-30,23;CL:0002319,5.23e-23,43;CL:0000221,2.54e-22,44;CL:0000133,2.54e-22,44;CL:0000540,1.45e-21,33;CL:0000047,1.45e-21,33;CL:0000031,1.45e-21,33;CL:0000404,1.45e-21,33;CL:0000393,2.52e-17,39;CL:0000211,2.52e-17,39;CL:0002321,1.89e-11,70;CL:0002609,1.03e-10,6;CL:0002614,4.73e-07,3;CL:0002610,9.96e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.36e-36!73;UBERON:0005743!3.36e-36!73;UBERON:0000073!7.16e-35!75;UBERON:0001016!7.16e-35!75;UBERON:0004121!5.11e-31!102;UBERON:0000924!5.11e-31!102;UBERON:0006601!5.11e-31!102;UBERON:0001049!1.52e-30!52;UBERON:0005068!1.52e-30!52;UBERON:0006241!1.52e-30!52;UBERON:0007135!1.52e-30!52;UBERON:0000955!3.95e-30!50;UBERON:0006238!3.95e-30!50;UBERON:0002346!7.05e-30!71;UBERON:0003075!7.05e-30!71;UBERON:0007284!7.05e-30!71;UBERON:0002616!2.28e-29!49;UBERON:0000033!1.57e-27!63;UBERON:0003056!1.53e-23!49;UBERON:0003080!3.33e-23!40;UBERON:0002780!9.43e-23!39;UBERON:0001890!9.43e-23!39;UBERON:0006240!9.43e-23!39;UBERON:0002020!5.02e-21!34;UBERON:0002791!3.29e-18!29;UBERON:0003528!3.29e-18!29;UBERON:0001893!3.29e-18!29;UBERON:0007811!7.44e-14!86;UBERON:0000153!1.28e-13!94;UBERON:0000956!2.60e-13!21;UBERON:0001869!2.60e-13!21;UBERON:0000203!2.60e-13!21;UBERON:0002619!9.65e-11!17;UBERON:0000025!3.16e-09!114;UBERON:0004111!2.22e-08!122;UBERON:0003076!1.10e-07!12;UBERON:0003057!1.10e-07!12;UBERON:0002021!7.37e-07!10;UBERON:0000411!7.37e-07!10;UBERON:0001950!7.37e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-51,54;UBERON:0001017,3.09e-51,73;UBERON:0001016,1.40e-49,75;UBERON:0001049,6.53e-45,52;UBERON:0005068,6.53e-45,52;UBERON:0006241,6.53e-45,52;UBERON:0007135,6.53e-45,52;UBERON:0000955,1.56e-42,47;UBERON:0006238,1.56e-42,47;UBERON:0002616,7.31e-41,46;UBERON:0002020,8.15e-39,34;UBERON:0002780,1.06e-37,39;UBERON:0001890,1.06e-37,39;UBERON:0006240,1.06e-37,39;UBERON:0004121,7.46e-37,95;UBERON:0000924,7.46e-37,95;UBERON:0006601,7.46e-37,95;UBERON:0002346,1.16e-36,64;UBERON:0003075,1.16e-36,64;UBERON:0007284,1.16e-36,64;UBERON:0003080,1.50e-36,40;UBERON:0003528,4.29e-34,29;UBERON:0002791,4.29e-34,29;UBERON:0001893,4.29e-34,29;UBERON:0010371,6.56e-31,73;UBERON:0003056,2.64e-28,49;UBERON:0000956,2.88e-24,21;UBERON:0001869,2.88e-24,21;UBERON:0000203,2.88e-24,21;UBERON:0010314,1.82e-22,92;UBERON:0002619,3.79e-18,17;UBERON:0000025,3.73e-15,114;UBERON:0004111,1.58e-13,122;UBERON:0011216,2.18e-12,194;UBERON:0002021,6.84e-11,10;UBERON:0000411,6.84e-11,10;UBERON:0001950,6.84e-11,10;UBERON:0002420,1.10e-10,8;UBERON:0007245,1.10e-10,8;UBERON:0010009,1.10e-10,8;UBERON:0010011,1.10e-10,8;UBERON:0000454,1.10e-10,8;UBERON:0001954,1.14e-08,7;UBERON:0003022,1.14e-08,7;UBERON:0002421,1.14e-08,7;UBERON:0000349,1.14e-08,7;UBERON:0002600,1.14e-08,7;UBERON:0003076,1.99e-08,12;UBERON:0003057,1.99e-08,12;UBERON:0000483,2.81e-07,174;UBERON:0000119,4.34e-07,176;UBERON:0002038,4.73e-07,3;UBERON:0009663,4.73e-07,3;UBERON:0009661,4.73e-07,3;UBERON:0000125,4.73e-07,3;UBERON:0002308,4.73e-07,3;UBERON:0004684,9.96e-07,3;UBERON:0002275,9.96e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,3.12956537739216,0.65407546914134,0.659058548203415,2.13872888981712,0.279972843250725,0,0,0,0,0.771778308107841,0.286533439938757,0,1.01158230429799,1.5869729378161,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0.7104801149461,2.69640099466564,5.37905627450176,1.55534418462716,2.70011876663381,1.89292465216244,2.28520787523043,1.76694832761291,1.5923803897944,2.01275489138296,4.5960939330501,4.40463523997555,1.78762273319263,3.68655679814984,1.05509030184155,2.56165402086747,0.52091337055676,3.35019598801657,3.37657566019008,3.97275444219706,1.76777151284201,1.42371680799103,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,3.22058876712702,1.67557365450764,0,0,0,0,0.898743836428936,1.83000241127451,1.38219787324151,2.60736480288415,1.53429274398198,3.74018480207208,1.29793010454206,0.916554274652847,0,0,0.631325567659422,0.520481771850815,0,0.900310649026746,0.150704817835715,0.340182495756639,0.384341160854549,0.468508622798644,0.517406741478031,0.215567992932842,0,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,1.05144974282064,1.64647379806855,0,0,0.853153002140936,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,1.60550589987792,0.937693492737625,0.163934945376675,0,0,0.780877488593277,1.50796378412959,0.955875191810208,0.668396022247182,0,0.404810701674894,0.584511715822624,0.395287777946524,2.24924921495265,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.905510786479282,1.07168517515796,0.532020700926821,1.24858172321449,0.987294123612726,2.74018454203139,0,0,0.220528398054962,0,0.484393280087717,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.777804753376191,0.387479470433193,0.675824501963113,1.17357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,1.6942555278512,2.30162618253588,2.86447756719698,2.23409137046794,1.37016503954128,2.2661816921691,2.02506750069542,4.05289082901798,0.453142408984205,0.51776031175182,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0,0,0,1.03017528619447,0,0,0.25347929989024,0.377252682772152,0,0.256100609619477,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0.685738504770831,0.70990322463735,0,0.436039249896986,0.282328141245992,0,0.548783918618318,0.789209134313529,0.407412341537585,0,0.474540072496697,0.394017929502254,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0.382576664137687,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,3.12956537739216,0.65407546914134,0.659058548203415,2.13872888981712,0.279972843250725,0,0,0,0,0.771778308107841,0.286533439938757,0,1.01158230429799,1.5869729378161,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0.7104801149461,2.69640099466564,5.37905627450176,1.55534418462716,2.70011876663381,1.89292465216244,2.28520787523043,1.76694832761291,1.5923803897944,2.01275489138296,4.5960939330501,4.40463523997555,1.78762273319263,3.68655679814984,1.05509030184155,2.56165402086747,0.52091337055676,3.35019598801657,3.37657566019008,3.97275444219706,1.76777151284201,1.42371680799103,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,3.22058876712702,1.67557365450764,0,0,0,0,0.898743836428936,1.83000241127451,1.38219787324151,2.60736480288415,1.53429274398198,3.74018480207208,1.29793010454206,0.916554274652847,0,0,0.631325567659422,0.520481771850815,0,0.900310649026746,0.150704817835715,0.340182495756639,0.384341160854549,0.468508622798644,0.517406741478031,0.215567992932842,0,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,1.05144974282064,1.64647379806855,0,0,0.853153002140936,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,1.60550589987792,0.937693492737625,0.163934945376675,0,0,0.780877488593277,1.50796378412959,0.955875191810208,0.668396022247182,0,0.404810701674894,0.584511715822624,0.395287777946524,2.24924921495265,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.905510786479282,1.07168517515796,0.532020700926821,1.24858172321449,0.987294123612726,2.74018454203139,0,0,0.220528398054962,0,0.484393280087717,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.777804753376191,0.387479470433193,0.675824501963113,1.17357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,1.6942555278512,2.30162618253588,2.86447756719698,2.23409137046794,1.37016503954128,2.2661816921691,2.02506750069542,4.05289082901798,0.453142408984205,0.51776031175182,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0,0,0,1.03017528619447,0,0,0.25347929989024,0.377252682772152,0,0.256100609619477,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0.685738504770831,0.70990322463735,0,0.436039249896986,0.282328141245992,0,0.548783918618318,0.789209134313529,0.407412341537585,0,0.474540072496697,0.394017929502254,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0.382576664137687,0.441182838239031,0
|short_description=p8@Clip3
|short_description=p8@Clip3
}}
}}

Latest revision as of 14:23, 26 September 2015

Short description:p8@Clip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Clip3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -419bp_to_ENSMUST00000132844_5end
EntrezGene:Clip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Clip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.65e-5154
central nervous system3.09e-5173
nervous system1.40e-4975
neural tube6.53e-4552
neural rod6.53e-4552
future spinal cord6.53e-4552
neural keel6.53e-4552
brain1.56e-4247
future brain1.56e-4247
regional part of brain7.31e-4146
gray matter8.15e-3934
regional part of forebrain1.06e-3739
forebrain1.06e-3739
future forebrain1.06e-3739
ectoderm-derived structure7.46e-3795
ectoderm7.46e-3795
presumptive ectoderm7.46e-3795
neurectoderm1.16e-3664
neural plate1.16e-3664
presumptive neural plate1.16e-3664
anterior neural tube1.50e-3640
brain grey matter4.29e-3429
regional part of telencephalon4.29e-3429
telencephalon4.29e-3429
ecto-epithelium6.56e-3173
pre-chordal neural plate2.64e-2849
cerebral cortex2.88e-2421
cerebral hemisphere2.88e-2421
pallium2.88e-2421
structure with developmental contribution from neural crest1.82e-2292
regional part of cerebral cortex3.79e-1817
tube3.73e-15114
anatomical conduit1.58e-13122
organ system subdivision2.18e-12194
occipital lobe6.84e-1110
visual cortex6.84e-1110
neocortex6.84e-1110
basal ganglion1.10e-108
nuclear complex of neuraxis1.10e-108
aggregate regional part of brain1.10e-108
collection of basal ganglia1.10e-108
cerebral subcortex1.10e-108
Ammon's horn1.14e-087
lobe parts of cerebral cortex1.14e-087
hippocampal formation1.14e-087
limbic system1.14e-087
limbic lobe1.14e-087
posterior neural tube1.99e-0812
chordal neural plate1.99e-0812
epithelium2.81e-07174
cell layer4.34e-07176
substantia nigra4.73e-073
telencephalic nucleus4.73e-073
midbrain nucleus4.73e-073
neural nucleus4.73e-073
nucleus of brain4.73e-073
raphe nuclei9.96e-073
reticular formation9.96e-073
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