FFCP PHASE1:Mm9::chr17:24625616..24625627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268932 | |EntrezGene=268932 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P9K8 | |UniProt=Q6P9K8 | ||
|association_with_transcript=-100bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end | |association_with_transcript=-100bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end | ||
|cluster_id=chr17:24625616..24625627,+ | |||
|description=CAGE_peak_5_at_Caskin1_5end | |description=CAGE_peak_5_at_Caskin1_5end | ||
|id=chr17:24625616..24625627,+ | |id=chr17:24625616..24625627,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.28e-08!33;CL:0000047!1.28e-08!33;CL:0000031!1.28e-08!33;CL:0000404!1.28e-08!33;CL:0000117!2.04e-08!23;CL:0000337!2.04e-08!23;CL:0000221!3.20e-07!44;CL:0000133!3.20e-07!44;CL:0002319!5.35e-07!43 | |ontology_enrichment_celltype=CL:0000540!1.28e-08!33;CL:0000047!1.28e-08!33;CL:0000031!1.28e-08!33;CL:0000404!1.28e-08!33;CL:0000117!2.04e-08!23;CL:0000337!2.04e-08!23;CL:0000221!3.20e-07!44;CL:0000133!3.20e-07!44;CL:0002319!5.35e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-15,23;CL:0000337,1.44e-15,23;CL:0000540,6.07e-10,33;CL:0000047,6.07e-10,33;CL:0000031,6.07e-10,33;CL:0000404,6.07e-10,33;CL:0002610,1.25e-08,3;CL:0002614,1.40e-08,3;CL:0000393,5.73e-08,39;CL:0000211,5.73e-08,39;CL:0002612,9.58e-08,3;CL:0002319,5.77e-07,43;CL:0000221,9.61e-07,44;CL:0000133,9.61e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.34e-24!73;UBERON:0005743!6.34e-24!73;UBERON:0002346!1.51e-23!71;UBERON:0003075!1.51e-23!71;UBERON:0007284!1.51e-23!71;UBERON:0000073!2.63e-23!75;UBERON:0001016!2.63e-23!75;UBERON:0004121!7.15e-22!102;UBERON:0000924!7.15e-22!102;UBERON:0006601!7.15e-22!102;UBERON:0001049!2.11e-20!52;UBERON:0005068!2.11e-20!52;UBERON:0006241!2.11e-20!52;UBERON:0007135!2.11e-20!52;UBERON:0000033!2.15e-19!63;UBERON:0000955!8.92e-19!50;UBERON:0006238!8.92e-19!50;UBERON:0002616!3.72e-18!49;UBERON:0003056!1.26e-15!49;UBERON:0002020!1.56e-14!34;UBERON:0003080!3.55e-14!40;UBERON:0002780!2.18e-13!39;UBERON:0001890!2.18e-13!39;UBERON:0006240!2.18e-13!39;UBERON:0002791!8.01e-11!29;UBERON:0003528!8.01e-11!29;UBERON:0001893!8.01e-11!29;UBERON:0007811!1.48e-09!86;UBERON:0000153!4.23e-09!94;UBERON:0002021!6.30e-08!10;UBERON:0000411!6.30e-08!10;UBERON:0001950!6.30e-08!10;UBERON:0002619!1.46e-07!17;UBERON:0003076!4.33e-07!12;UBERON:0003057!4.33e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!6.34e-24!73;UBERON:0005743!6.34e-24!73;UBERON:0002346!1.51e-23!71;UBERON:0003075!1.51e-23!71;UBERON:0007284!1.51e-23!71;UBERON:0000073!2.63e-23!75;UBERON:0001016!2.63e-23!75;UBERON:0004121!7.15e-22!102;UBERON:0000924!7.15e-22!102;UBERON:0006601!7.15e-22!102;UBERON:0001049!2.11e-20!52;UBERON:0005068!2.11e-20!52;UBERON:0006241!2.11e-20!52;UBERON:0007135!2.11e-20!52;UBERON:0000033!2.15e-19!63;UBERON:0000955!8.92e-19!50;UBERON:0006238!8.92e-19!50;UBERON:0002616!3.72e-18!49;UBERON:0003056!1.26e-15!49;UBERON:0002020!1.56e-14!34;UBERON:0003080!3.55e-14!40;UBERON:0002780!2.18e-13!39;UBERON:0001890!2.18e-13!39;UBERON:0006240!2.18e-13!39;UBERON:0002791!8.01e-11!29;UBERON:0003528!8.01e-11!29;UBERON:0001893!8.01e-11!29;UBERON:0007811!1.48e-09!86;UBERON:0000153!4.23e-09!94;UBERON:0002021!6.30e-08!10;UBERON:0000411!6.30e-08!10;UBERON:0001950!6.30e-08!10;UBERON:0002619!1.46e-07!17;UBERON:0003076!4.33e-07!12;UBERON:0003057!4.33e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.97e-32,54;UBERON:0001049,3.80e-28,52;UBERON:0005068,3.80e-28,52;UBERON:0006241,3.80e-28,52;UBERON:0007135,3.80e-28,52;UBERON:0001017,1.32e-25,73;UBERON:0001016,9.75e-25,75;UBERON:0002346,1.12e-21,64;UBERON:0003075,1.12e-21,64;UBERON:0007284,1.12e-21,64;UBERON:0003076,4.40e-19,12;UBERON:0003057,4.40e-19,12;UBERON:0002020,1.15e-18,34;UBERON:0010371,3.18e-18,73;UBERON:0002616,3.51e-18,46;UBERON:0004121,4.65e-18,95;UBERON:0000924,4.65e-18,95;UBERON:0006601,4.65e-18,95;UBERON:0000955,1.10e-17,47;UBERON:0006238,1.10e-17,47;UBERON:0002240,1.19e-14,6;UBERON:0005174,1.19e-14,6;UBERON:0001137,1.19e-14,6;UBERON:0003080,2.69e-13,40;UBERON:0010314,3.72e-13,92;UBERON:0001948,1.86e-12,5;UBERON:0002315,1.86e-12,5;UBERON:0002780,7.56e-12,39;UBERON:0001890,7.56e-12,39;UBERON:0006240,7.56e-12,39;UBERON:0002950,5.45e-11,4;UBERON:0001891,5.45e-11,4;UBERON:0009616,5.45e-11,4;UBERON:0010286,5.45e-11,4;UBERON:0003528,6.89e-11,29;UBERON:0002791,6.89e-11,29;UBERON:0001893,6.89e-11,29;UBERON:0002021,2.73e-10,10;UBERON:0000411,2.73e-10,10;UBERON:0001950,2.73e-10,10;UBERON:0003056,3.94e-10,49;UBERON:0000025,2.06e-09,114;UBERON:0004684,1.25e-08,3;UBERON:0002275,1.25e-08,3;UBERON:0002038,1.40e-08,3;UBERON:0009663,1.40e-08,3;UBERON:0009661,1.40e-08,3;UBERON:0000125,1.40e-08,3;UBERON:0002308,1.40e-08,3;UBERON:0004111,2.16e-08,122;UBERON:0002257,9.58e-08,3;UBERON:0002420,1.47e-07,8;UBERON:0007245,1.47e-07,8;UBERON:0010009,1.47e-07,8;UBERON:0010011,1.47e-07,8;UBERON:0000454,1.47e-07,8;UBERON:0004733,8.56e-07,6;UBERON:0004732,8.56e-07,6;UBERON:0002028,8.56e-07,6;UBERON:0007277,8.56e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,7.14127461009509,3.75476519617743,0.244981598429908,0.191690942036473,0,6.60695285996332,4.46905683298157,3.68655679814984,1.31886287730194,0.457438218012048,0.52091337055676,6.14202597803038,4.50210088025344,3.36156145108982,4.41942878210502,3.27454865837937,1.3047961207771,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,3.80615036115011,1.67557365450764,0,0,0,0,5.24267237916879,2.74500361691176,0.502617408451458,1.56441888173049,0.767146371990992,3.94797284663164,3.0825839982874,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0.816437989815934,0.768682321709099,0.655912071918102,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0.264450566663544,0,0,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,3.05046120976805,5.04010252346474,0,0,0.315508219416257,0.390438744296638,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,0.963963949265421,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,1.48094118541909,0.304464949114599,1.40803024838226,1.90648863777438,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0.66183396182839,2.33341426012857,0.904118764344118,1.35164900392623,1.05621514781179,0.911430693907651,1.04859344425711,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,2.25900737046827,1.84130094602871,2.29158205375759,0.68741272937475,0.685082519770642,1.5107877947794,1.35004500046361,2.70192721934532,0.906284817968409,2.5888015587591,0.207574695168353,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,1.77435509923168,0.377252682772152,0.0936415074698824,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.999242311751784,0,0,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,7.14127461009509,3.75476519617743,0.244981598429908,0.191690942036473,0,6.60695285996332,4.46905683298157,3.68655679814984,1.31886287730194,0.457438218012048,0.52091337055676,6.14202597803038,4.50210088025344,3.36156145108982,4.41942878210502,3.27454865837937,1.3047961207771,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,3.80615036115011,1.67557365450764,0,0,0,0,5.24267237916879,2.74500361691176,0.502617408451458,1.56441888173049,0.767146371990992,3.94797284663164,3.0825839982874,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0.816437989815934,0.768682321709099,0.655912071918102,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0.264450566663544,0,0,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,3.05046120976805,5.04010252346474,0,0,0.315508219416257,0.390438744296638,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,0.963963949265421,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,1.48094118541909,0.304464949114599,1.40803024838226,1.90648863777438,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0.66183396182839,2.33341426012857,0.904118764344118,1.35164900392623,1.05621514781179,0.911430693907651,1.04859344425711,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,2.25900737046827,1.84130094602871,2.29158205375759,0.68741272937475,0.685082519770642,1.5107877947794,1.35004500046361,2.70192721934532,0.906284817968409,2.5888015587591,0.207574695168353,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,1.77435509923168,0.377252682772152,0.0936415074698824,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.999242311751784,0,0,0.57386499620653,0.220591419119515,0 | ||
|short_description=p5@Caskin1 | |short_description=p5@Caskin1 | ||
}} | }} |
Latest revision as of 01:34, 26 September 2015
Short description: | p5@Caskin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Caskin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | -100bp_to_ENSMUST00000024958, ENSMUST00000088474, ENSMUST00000115347, NM_027937, uc008awm.1, uc008awo.1, uc008awp.2, uc012amk.1_5end |
EntrezGene: | Caskin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.44e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-15 | 23 |
neuron | 6.07e-10 | 33 |
neuronal stem cell | 6.07e-10 | 33 |
neuroblast | 6.07e-10 | 33 |
electrically signaling cell | 6.07e-10 | 33 |
raphe nuclei neuron | 1.25e-08 | 3 |
neuron of the substantia nigra | 1.40e-08 | 3 |
electrically responsive cell | 5.73e-08 | 39 |
electrically active cell | 5.73e-08 | 39 |
neuron of the ventral spinal cord | 9.58e-08 | 3 |
neural cell | 5.77e-07 | 43 |
ectodermal cell | 9.61e-07 | 44 |
neurectodermal cell | 9.61e-07 | 44 |