FFCP PHASE1:Mm9::chr7:31076935..31076958,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76686|HGNC=|MCL_coexpression_id=1330|UniProt=D3Z2W8|association_with_transcript=-18bp_to_ENSMUST00000144508_5end|description=CAGE_peak_2_at_Clip3_5end|id=chr7:31076935..31076958,+|ontology_enrichment_celltype=CL:0002319!9.28e-20!43;CL:0000221!1.02e-19!44;CL:0000133!1.02e-19!44;CL:0000055!2.62e-17!50;CL:0000540!2.99e-14!33;CL:0000047!2.99e-14!33;CL:0000031!2.99e-14!33;CL:0000404!2.99e-14!33;CL:0000393!7.93e-13!39;CL:0000211!7.93e-13!39;CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0002453!9.77e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,5.31e-26,43;CL:0000221,4.13e-25,44;CL:0000133,4.13e-25,44;CL:0000540,2.42e-19,33;CL:0000047,2.42e-19,33;CL:0000031,2.42e-19,33;CL:0000404,2.42e-19,33;CL:0000393,5.16e-17,39;CL:0000211,5.16e-17,39;CL:0000117,5.57e-16,23;CL:0000337,5.57e-16,23;CL:0002321,1.24e-12,70;CL:0002453,7.05e-10,8;CL:0000128,1.39e-07,6;CL:0000126,1.39e-07,6;CL:0000127,1.39e-07,6;CL:0000333,2.04e-07,10;CL:0000095,2.04e-07,10;CL:0000243,2.04e-07,10;CL:0000123,2.04e-07,10;CL:0000125,2.04e-07,10;CL:0000030,2.04e-07,10;CL:0000339,2.04e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.80e-36!75;UBERON:0001016!2.80e-36!75;UBERON:0001017!3.90e-36!73;UBERON:0005743!3.90e-36!73;UBERON:0004121!1.32e-31!102;UBERON:0000924!1.32e-31!102;UBERON:0006601!1.32e-31!102;UBERON:0002346!1.04e-26!71;UBERON:0003075!1.04e-26!71;UBERON:0007284!1.04e-26!71;UBERON:0001049!1.43e-25!52;UBERON:0005068!1.43e-25!52;UBERON:0006241!1.43e-25!52;UBERON:0007135!1.43e-25!52;UBERON:0000955!2.69e-24!50;UBERON:0006238!2.69e-24!50;UBERON:0000033!6.40e-24!63;UBERON:0002616!1.56e-23!49;UBERON:0003056!3.81e-19!49;UBERON:0002020!5.24e-19!34;UBERON:0003080!2.19e-17!40;UBERON:0002780!7.30e-17!39;UBERON:0001890!7.30e-17!39;UBERON:0006240!7.30e-17!39;UBERON:0002791!5.36e-16!29;UBERON:0003528!5.36e-16!29;UBERON:0001893!5.36e-16!29;UBERON:0000956!1.86e-12!21;UBERON:0001869!1.86e-12!21;UBERON:0000203!1.86e-12!21;UBERON:0000153!8.23e-12!94;UBERON:0002619!1.58e-10!17;UBERON:0007811!2.25e-10!86;UBERON:0003076!6.70e-09!12;UBERON:0003057!6.70e-09!12;UBERON:0002021!7.57e-07!10;UBERON:0000411!7.57e-07!10;UBERON:0001950!7.57e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.09e-51,73;UBERON:0001016,2.74e-49,75;UBERON:0004121,3.03e-41,95;UBERON:0000924,3.03e-41,95;UBERON:0006601,3.03e-41,95;UBERON:0002346,2.61e-39,64;UBERON:0003075,2.61e-39,64;UBERON:0007284,2.61e-39,64;UBERON:0000073,2.78e-39,54;UBERON:0001049,2.34e-37,52;UBERON:0005068,2.34e-37,52;UBERON:0006241,2.34e-37,52;UBERON:0007135,2.34e-37,52;UBERON:0000955,2.86e-32,47;UBERON:0006238,2.86e-32,47;UBERON:0010371,3.85e-32,73;UBERON:0002616,4.36e-31,46;UBERON:0002020,1.37e-29,34;UBERON:0003528,9.64e-25,29;UBERON:0002791,9.64e-25,29;UBERON:0001893,9.64e-25,29;UBERON:0003080,1.96e-24,40;UBERON:0003056,3.05e-24,49;UBERON:0002780,1.32e-23,39;UBERON:0001890,1.32e-23,39;UBERON:0006240,1.32e-23,39;UBERON:0010314,1.28e-22,92;UBERON:0000956,4.77e-19,21;UBERON:0001869,4.77e-19,21;UBERON:0000203,4.77e-19,21;UBERON:0002619,6.01e-16,17;UBERON:0003076,2.44e-13,12;UBERON:0003057,2.44e-13,12;UBERON:0000025,2.25e-10,114;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0004111,9.48e-09,122;UBERON:0004733,7.68e-08,6;UBERON:0004732,7.68e-08,6;UBERON:0002028,7.68e-08,6;UBERON:0007277,7.68e-08,6;UBERON:0001954,2.56e-07,7;UBERON:0003022,2.56e-07,7;UBERON:0002421,2.56e-07,7;UBERON:0000349,2.56e-07,7;UBERON:0002600,2.56e-07,7;UBERON:0002240,5.00e-07,6;UBERON:0005174,5.00e-07,6;UBERON:0001137,5.00e-07,6;UBERON:0002420,7.79e-07,8;UBERON:0007245,7.79e-07,8;UBERON:0010009,7.79e-07,8;UBERON:0010011,7.79e-07,8;UBERON:0000454,7.79e-07,8;UBERON:0011216,9.93e-07,194|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.811015449756117,1.46837401729345,5.47673941043627,4.36050312760893,18.6733255324301,14.387812531497,4.4795654920116,10.062679505548,0,0,0,0.257259436035947,0,0,1.21389876515759,1.05798195854407,0.633831403506179,1.0165335962074,0,0,0,0,17.0772062995491,17.28982373947,2.17748185847803,2.97013064329719,2.94454945891935,7.42692559449889,6.18431914664518,1.95985278743926,2.77951865952885,1.83843757322004,4.40463523997555,6.00130489000382,4.30098293117482,1.58263545276233,2.10421580285542,1.56274011167028,4.74611098302348,3.93933827022176,3.66715794664344,3.53554302568401,4.55589378557129,2.98239113320481,0.454357159999104,0.982430281388212,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0,0,0.913396434936424,0.461230994512117,0.150722640552623,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,20.2018749937968,17.3840766655168,0,0,0,0,3.14560342750128,5.94750783664214,1.88481528169297,5.56237824615285,8.43861009190091,6.02585329222724,7.62533936418461,2.64782346010822,0.2488139412201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| ||
|EntrezGene=76686 | |||
|HGNC= | |||
|MCL_coexpression_id=1330 | |||
|UniProt=D3Z2W8 | |||
|association_with_transcript=-18bp_to_ENSMUST00000144508_5end | |||
|description=CAGE_peak_2_at_Clip3_5end | |||
|id=chr7:31076935..31076958,+ | |||
|ontology_enrichment_celltype=CL:0002319!9.28e-20!43;CL:0000221!1.02e-19!44;CL:0000133!1.02e-19!44;CL:0000055!2.62e-17!50;CL:0000540!2.99e-14!33;CL:0000047!2.99e-14!33;CL:0000031!2.99e-14!33;CL:0000404!2.99e-14!33;CL:0000393!7.93e-13!39;CL:0000211!7.93e-13!39;CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0002453!9.77e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.31e-26,43;CL:0000221,4.13e-25,44;CL:0000133,4.13e-25,44;CL:0000540,2.42e-19,33;CL:0000047,2.42e-19,33;CL:0000031,2.42e-19,33;CL:0000404,2.42e-19,33;CL:0000393,5.16e-17,39;CL:0000211,5.16e-17,39;CL:0000117,5.57e-16,23;CL:0000337,5.57e-16,23;CL:0002321,1.24e-12,70;CL:0002453,7.05e-10,8;CL:0000128,1.39e-07,6;CL:0000126,1.39e-07,6;CL:0000127,1.39e-07,6;CL:0000333,2.04e-07,10;CL:0000095,2.04e-07,10;CL:0000243,2.04e-07,10;CL:0000123,2.04e-07,10;CL:0000125,2.04e-07,10;CL:0000030,2.04e-07,10;CL:0000339,2.04e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.80e-36!75;UBERON:0001016!2.80e-36!75;UBERON:0001017!3.90e-36!73;UBERON:0005743!3.90e-36!73;UBERON:0004121!1.32e-31!102;UBERON:0000924!1.32e-31!102;UBERON:0006601!1.32e-31!102;UBERON:0002346!1.04e-26!71;UBERON:0003075!1.04e-26!71;UBERON:0007284!1.04e-26!71;UBERON:0001049!1.43e-25!52;UBERON:0005068!1.43e-25!52;UBERON:0006241!1.43e-25!52;UBERON:0007135!1.43e-25!52;UBERON:0000955!2.69e-24!50;UBERON:0006238!2.69e-24!50;UBERON:0000033!6.40e-24!63;UBERON:0002616!1.56e-23!49;UBERON:0003056!3.81e-19!49;UBERON:0002020!5.24e-19!34;UBERON:0003080!2.19e-17!40;UBERON:0002780!7.30e-17!39;UBERON:0001890!7.30e-17!39;UBERON:0006240!7.30e-17!39;UBERON:0002791!5.36e-16!29;UBERON:0003528!5.36e-16!29;UBERON:0001893!5.36e-16!29;UBERON:0000956!1.86e-12!21;UBERON:0001869!1.86e-12!21;UBERON:0000203!1.86e-12!21;UBERON:0000153!8.23e-12!94;UBERON:0002619!1.58e-10!17;UBERON:0007811!2.25e-10!86;UBERON:0003076!6.70e-09!12;UBERON:0003057!6.70e-09!12;UBERON:0002021!7.57e-07!10;UBERON:0000411!7.57e-07!10;UBERON:0001950!7.57e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.09e-51,73;UBERON:0001016,2.74e-49,75;UBERON:0004121,3.03e-41,95;UBERON:0000924,3.03e-41,95;UBERON:0006601,3.03e-41,95;UBERON:0002346,2.61e-39,64;UBERON:0003075,2.61e-39,64;UBERON:0007284,2.61e-39,64;UBERON:0000073,2.78e-39,54;UBERON:0001049,2.34e-37,52;UBERON:0005068,2.34e-37,52;UBERON:0006241,2.34e-37,52;UBERON:0007135,2.34e-37,52;UBERON:0000955,2.86e-32,47;UBERON:0006238,2.86e-32,47;UBERON:0010371,3.85e-32,73;UBERON:0002616,4.36e-31,46;UBERON:0002020,1.37e-29,34;UBERON:0003528,9.64e-25,29;UBERON:0002791,9.64e-25,29;UBERON:0001893,9.64e-25,29;UBERON:0003080,1.96e-24,40;UBERON:0003056,3.05e-24,49;UBERON:0002780,1.32e-23,39;UBERON:0001890,1.32e-23,39;UBERON:0006240,1.32e-23,39;UBERON:0010314,1.28e-22,92;UBERON:0000956,4.77e-19,21;UBERON:0001869,4.77e-19,21;UBERON:0000203,4.77e-19,21;UBERON:0002619,6.01e-16,17;UBERON:0003076,2.44e-13,12;UBERON:0003057,2.44e-13,12;UBERON:0000025,2.25e-10,114;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0004111,9.48e-09,122;UBERON:0004733,7.68e-08,6;UBERON:0004732,7.68e-08,6;UBERON:0002028,7.68e-08,6;UBERON:0007277,7.68e-08,6;UBERON:0001954,2.56e-07,7;UBERON:0003022,2.56e-07,7;UBERON:0002421,2.56e-07,7;UBERON:0000349,2.56e-07,7;UBERON:0002600,2.56e-07,7;UBERON:0002240,5.00e-07,6;UBERON:0005174,5.00e-07,6;UBERON:0001137,5.00e-07,6;UBERON:0002420,7.79e-07,8;UBERON:0007245,7.79e-07,8;UBERON:0010009,7.79e-07,8;UBERON:0010011,7.79e-07,8;UBERON:0000454,7.79e-07,8;UBERON:0011216,9.93e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.811015449756117,1.46837401729345,5.47673941043627,4.36050312760893,18.6733255324301,14.387812531497,4.4795654920116,10.062679505548,0,0,0,0.257259436035947,0,0,1.21389876515759,1.05798195854407,0.633831403506179,1.0165335962074,0,0,0,0,17.0772062995491,17.28982373947,2.17748185847803,2.97013064329719,2.94454945891935,7.42692559449889,6.18431914664518,1.95985278743926,2.77951865952885,1.83843757322004,4.40463523997555,6.00130489000382,4.30098293117482,1.58263545276233,2.10421580285542,1.56274011167028,4.74611098302348,3.93933827022176,3.66715794664344,3.53554302568401,4.55589378557129,2.98239113320481,0.454357159999104,0.982430281388212,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0,0,0.913396434936424,0.461230994512117,0.150722640552623,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,20.2018749937968,17.3840766655168,0,0,0,0,3.14560342750128,5.94750783664214,1.88481528169297,5.56237824615285,8.43861009190091,6.02585329222724,7.62533936418461,2.64782346010822,0.248813941220186,0,1.05220927943237,0.390361328888111,0.459804208866946,0.720248519221397,0.60281927134286,2.51735046859913,2.17793324484245,1.59292931751539,2.84573707812917,0.862271971731369,0.756424320671277,0.351902248327898,0.876782929710299,0.834141747676794,2.089512999133,0.411564272815887,1.59227413454795,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,5.04695876553905,5.9684675179985,0,0.264450566663544,0.853153002140936,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0.203651327845314,0.775809948670503,0.701358198903186,0.0632365371242573,0,0,0.246794327843601,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.678980343100753,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,7.86697890940181,12.5416504653657,1.80328439914343,1.51482556322624,1.89304931649754,2.73307121007647,2.58508077279359,1.91175038362042,2.00518806674155,1.98153571552183,0.809621403349789,3.21481443702443,2.37172666767914,9.3183181762324,0.141940085208269,1.78065603667255,3.90928702448583,0.659880491890142,0,0.728341908464944,0.604647113929502,0.188605079755898,0.590603785761546,0,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.646793418913773,0.428674070063185,0.354680467284547,1.60531935841864,2.13913726782757,2.74018454203139,0,0.21183207086382,0.441056796109924,0.32977250588296,0.807322133479528,0.422190474497091,0.238744688006273,0.164140899745061,0,9.08583979851498,0.512612642393558,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0,0.139951452323658,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.495920734352016,0,0,0,0,0.897099276263873,0.992750942742586,1.55560950675238,0.774958940866387,0.844780627453891,2.22978753426933,0.2604087696879,0.209718688851422,0,0,0,0,0.410843828659309,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,7.34177395402186,5.9842280745933,5.15605962095457,7.56154002312225,2.05524755931193,6.7985450765073,4.05013500139084,2.70192721934532,3.17199686288943,4.14208249401456,0.518936737920883,0.399024873401031,0.170733605754134,0.729320151204882,0.628839487883947,0.735374033800057,0.666740183404846,1.03017528619447,0,1.51618327058278,1.2673964994512,1.32038438970253,0.468207537349412,0.832326981263301,0.746661096422973,0.476293691283074,0.695305955669133,0.77163688185482,2.06042950401653,1.03039244094078,0.342869252385415,0,0,0.581385666529314,0.470546902076653,0.507687647350059,0.548783918618318,0.789209134313529,0.407412341537585,0.561142271657738,0.474540072496697,1.18205378850676,1.63692417267876,0.77468420592983,0,2.74791635731741,0.233931608445408,1.50409737833809,0.382576664137687,0.441182838239031,0.695603506861264 | |||
|short_description=p2@Clip3 | |||
}} |
Revision as of 13:10, 14 September 2013
Short description: | p2@Clip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1330 |
Association with transcript: | -18bp_to_ENSMUST00000144508_5end |
EntrezGene: | Clip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.31e-26 | 43 |
ectodermal cell | 4.13e-25 | 44 |
neurectodermal cell | 4.13e-25 | 44 |
neuron | 2.42e-19 | 33 |
neuronal stem cell | 2.42e-19 | 33 |
neuroblast | 2.42e-19 | 33 |
electrically signaling cell | 2.42e-19 | 33 |
electrically responsive cell | 5.16e-17 | 39 |
electrically active cell | 5.16e-17 | 39 |
CNS neuron (sensu Vertebrata) | 5.57e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.57e-16 | 23 |
embryonic cell | 1.24e-12 | 70 |
oligodendrocyte precursor cell | 7.05e-10 | 8 |
oligodendrocyte | 1.39e-07 | 6 |
macroglial cell | 1.39e-07 | 6 |
astrocyte | 1.39e-07 | 6 |
migratory neural crest cell | 2.04e-07 | 10 |
neuron associated cell | 2.04e-07 | 10 |
glial cell (sensu Vertebrata) | 2.04e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.04e-07 | 10 |
glial cell | 2.04e-07 | 10 |
glioblast | 2.04e-07 | 10 |
glioblast (sensu Vertebrata) | 2.04e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.