FFCP PHASE1:Mm9::chr4:46800475..46800496,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:46800475..46800496,+|id=chr4:46800475..46800496,+|ontology_enrichment_celltype=CL:0000117!3.38e-15!23;CL:0000337!3.38e-15!23;CL:0000540!5.14e-09!33;CL:0000047!5.14e-09!33;CL:0000031!5.14e-09!33;CL:0000404!5.14e-09!33;CL:0000393!6.84e-07!39;CL:0000211!6.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-13,23;CL:0000337,1.61e-13,23;CL:0002614,1.05e-09,3;CL:0002610,1.21e-09,3;CL:0000540,8.43e-09,33;CL:0000047,8.43e-09,33;CL:0000031,8.43e-09,33;CL:0000404,8.43e-09,33;CL:0000393,3.88e-07,39;CL:0000211,3.88e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.60e-29!52;UBERON:0005068!4.60e-29!52;UBERON:0006241!4.60e-29!52;UBERON:0007135!4.60e-29!52;UBERON:0001017!9.25e-28!73;UBERON:0005743!9.25e-28!73;UBERON:0000955!3.96e-27!50;UBERON:0006238!3.96e-27!50;UBERON:0000073!1.17e-26!75;UBERON:0001016!1.17e-26!75;UBERON:0002616!4.76e-26!49;UBERON:0000033!8.25e-26!63;UBERON:0002020!2.49e-24!34;UBERON:0002346!2.96e-24!71;UBERON:0003075!2.96e-24!71;UBERON:0007284!2.96e-24!71;UBERON:0004121!4.70e-21!102;UBERON:0000924!4.70e-21!102;UBERON:0006601!4.70e-21!102;UBERON:0003056!9.51e-21!49;UBERON:0003080!1.62e-19!40;UBERON:0002791!8.09e-19!29;UBERON:0003528!8.09e-19!29;UBERON:0001893!8.09e-19!29;UBERON:0002780!2.59e-18!39;UBERON:0001890!2.59e-18!39;UBERON:0006240!2.59e-18!39;UBERON:0007811!1.11e-15!86;UBERON:0002021!3.79e-14!10;UBERON:0000411!3.79e-14!10;UBERON:0001950!3.79e-14!10;UBERON:0000153!2.35e-13!94;UBERON:0000956!2.34e-12!21;UBERON:0001869!2.34e-12!21;UBERON:0000203!2.34e-12!21;UBERON:0002619!3.59e-12!17;UBERON:0000025!6.84e-11!114;UBERON:0003076!3.67e-10!12;UBERON:0003057!3.67e-10!12;UBERON:0004111!2.04e-09!122;UBERON:0002298!6.91e-09!6;UBERON:0002240!4.19e-08!6;UBERON:0005174!4.19e-08!6;UBERON:0001137!4.19e-08!6;UBERON:0002420!8.10e-08!8;UBERON:0007245!8.10e-08!8;UBERON:0010009!8.10e-08!8;UBERON:0010011!8.10e-08!8;UBERON:0000454!8.10e-08!8;UBERON:0001948!5.60e-07!5;UBERON:0002315!5.60e-07!5;UBERON:0002950!9.95e-07!4;UBERON:0001891!9.95e-07!4;UBERON:0009616!9.95e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.89e-31,54;UBERON:0001017,1.12e-27,73;UBERON:0001016,8.37e-27,75;UBERON:0001049,1.53e-26,52;UBERON:0005068,1.53e-26,52;UBERON:0006241,1.53e-26,52;UBERON:0007135,1.53e-26,52;UBERON:0002020,1.50e-22,34;UBERON:0002346,1.08e-20,64;UBERON:0003075,1.08e-20,64;UBERON:0007284,1.08e-20,64;UBERON:0002616,2.37e-20,46;UBERON:0004121,4.43e-20,95;UBERON:0000924,4.43e-20,95;UBERON:0006601,4.43e-20,95;UBERON:0000955,7.82e-20,47;UBERON:0006238,7.82e-20,47;UBERON:0003528,3.96e-18,29;UBERON:0002791,3.96e-18,29;UBERON:0001893,3.96e-18,29;UBERON:0010371,1.46e-17,73;UBERON:0003080,1.18e-16,40;UBERON:0002021,2.92e-15,10;UBERON:0000411,2.92e-15,10;UBERON:0001950,2.92e-15,10;UBERON:0002780,7.51e-15,39;UBERON:0001890,7.51e-15,39;UBERON:0006240,7.51e-15,39;UBERON:0002619,1.87e-13,17;UBERON:0000956,2.98e-13,21;UBERON:0001869,2.98e-13,21;UBERON:0000203,2.98e-13,21;UBERON:0003056,5.75e-13,49;UBERON:0010314,5.79e-13,92;UBERON:0002950,1.27e-12,4;UBERON:0001891,1.27e-12,4;UBERON:0009616,1.27e-12,4;UBERON:0010286,1.27e-12,4;UBERON:0003076,5.71e-11,12;UBERON:0003057,5.71e-11,12;UBERON:0000025,1.08e-10,114;UBERON:0002038,1.05e-09,3;UBERON:0009663,1.05e-09,3;UBERON:0009661,1.05e-09,3;UBERON:0000125,1.05e-09,3;UBERON:0002308,1.05e-09,3;UBERON:0004111,1.14e-09,122;UBERON:0004684,1.21e-09,3;UBERON:0002275,1.21e-09,3;UBERON:0011216,5.60e-08,194;UBERON:0002240,8.35e-08,6;UBERON:0005174,8.35e-08,6;UBERON:0001137,8.35e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,1.10434270475807,0,0.287536413054709,0,1.10115880999389,2.29837208553338,2.30409799884365,0.395658863190582,0.274462930807229,0,2.23346399201105,1.68828783009504,1.83357897332172,1.76777151284201,1.70846016958924,0.372798891650601,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.25668024088073,0,0,0,0,2.54644086988199,0.915001205637253,1.13088916901578,4.34560800480691,3.06858548796397,2.49345653471472,0.973447578406546,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.896796041993948,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,1.86070473834252,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:46800475..46800496,+ | |||
|id=chr4:46800475..46800496,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.38e-15!23;CL:0000337!3.38e-15!23;CL:0000540!5.14e-09!33;CL:0000047!5.14e-09!33;CL:0000031!5.14e-09!33;CL:0000404!5.14e-09!33;CL:0000393!6.84e-07!39;CL:0000211!6.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-13,23;CL:0000337,1.61e-13,23;CL:0002614,1.05e-09,3;CL:0002610,1.21e-09,3;CL:0000540,8.43e-09,33;CL:0000047,8.43e-09,33;CL:0000031,8.43e-09,33;CL:0000404,8.43e-09,33;CL:0000393,3.88e-07,39;CL:0000211,3.88e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.60e-29!52;UBERON:0005068!4.60e-29!52;UBERON:0006241!4.60e-29!52;UBERON:0007135!4.60e-29!52;UBERON:0001017!9.25e-28!73;UBERON:0005743!9.25e-28!73;UBERON:0000955!3.96e-27!50;UBERON:0006238!3.96e-27!50;UBERON:0000073!1.17e-26!75;UBERON:0001016!1.17e-26!75;UBERON:0002616!4.76e-26!49;UBERON:0000033!8.25e-26!63;UBERON:0002020!2.49e-24!34;UBERON:0002346!2.96e-24!71;UBERON:0003075!2.96e-24!71;UBERON:0007284!2.96e-24!71;UBERON:0004121!4.70e-21!102;UBERON:0000924!4.70e-21!102;UBERON:0006601!4.70e-21!102;UBERON:0003056!9.51e-21!49;UBERON:0003080!1.62e-19!40;UBERON:0002791!8.09e-19!29;UBERON:0003528!8.09e-19!29;UBERON:0001893!8.09e-19!29;UBERON:0002780!2.59e-18!39;UBERON:0001890!2.59e-18!39;UBERON:0006240!2.59e-18!39;UBERON:0007811!1.11e-15!86;UBERON:0002021!3.79e-14!10;UBERON:0000411!3.79e-14!10;UBERON:0001950!3.79e-14!10;UBERON:0000153!2.35e-13!94;UBERON:0000956!2.34e-12!21;UBERON:0001869!2.34e-12!21;UBERON:0000203!2.34e-12!21;UBERON:0002619!3.59e-12!17;UBERON:0000025!6.84e-11!114;UBERON:0003076!3.67e-10!12;UBERON:0003057!3.67e-10!12;UBERON:0004111!2.04e-09!122;UBERON:0002298!6.91e-09!6;UBERON:0002240!4.19e-08!6;UBERON:0005174!4.19e-08!6;UBERON:0001137!4.19e-08!6;UBERON:0002420!8.10e-08!8;UBERON:0007245!8.10e-08!8;UBERON:0010009!8.10e-08!8;UBERON:0010011!8.10e-08!8;UBERON:0000454!8.10e-08!8;UBERON:0001948!5.60e-07!5;UBERON:0002315!5.60e-07!5;UBERON:0002950!9.95e-07!4;UBERON:0001891!9.95e-07!4;UBERON:0009616!9.95e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.89e-31,54;UBERON:0001017,1.12e-27,73;UBERON:0001016,8.37e-27,75;UBERON:0001049,1.53e-26,52;UBERON:0005068,1.53e-26,52;UBERON:0006241,1.53e-26,52;UBERON:0007135,1.53e-26,52;UBERON:0002020,1.50e-22,34;UBERON:0002346,1.08e-20,64;UBERON:0003075,1.08e-20,64;UBERON:0007284,1.08e-20,64;UBERON:0002616,2.37e-20,46;UBERON:0004121,4.43e-20,95;UBERON:0000924,4.43e-20,95;UBERON:0006601,4.43e-20,95;UBERON:0000955,7.82e-20,47;UBERON:0006238,7.82e-20,47;UBERON:0003528,3.96e-18,29;UBERON:0002791,3.96e-18,29;UBERON:0001893,3.96e-18,29;UBERON:0010371,1.46e-17,73;UBERON:0003080,1.18e-16,40;UBERON:0002021,2.92e-15,10;UBERON:0000411,2.92e-15,10;UBERON:0001950,2.92e-15,10;UBERON:0002780,7.51e-15,39;UBERON:0001890,7.51e-15,39;UBERON:0006240,7.51e-15,39;UBERON:0002619,1.87e-13,17;UBERON:0000956,2.98e-13,21;UBERON:0001869,2.98e-13,21;UBERON:0000203,2.98e-13,21;UBERON:0003056,5.75e-13,49;UBERON:0010314,5.79e-13,92;UBERON:0002950,1.27e-12,4;UBERON:0001891,1.27e-12,4;UBERON:0009616,1.27e-12,4;UBERON:0010286,1.27e-12,4;UBERON:0003076,5.71e-11,12;UBERON:0003057,5.71e-11,12;UBERON:0000025,1.08e-10,114;UBERON:0002038,1.05e-09,3;UBERON:0009663,1.05e-09,3;UBERON:0009661,1.05e-09,3;UBERON:0000125,1.05e-09,3;UBERON:0002308,1.05e-09,3;UBERON:0004111,1.14e-09,122;UBERON:0004684,1.21e-09,3;UBERON:0002275,1.21e-09,3;UBERON:0011216,5.60e-08,194;UBERON:0002240,8.35e-08,6;UBERON:0005174,8.35e-08,6;UBERON:0001137,8.35e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,1.10434270475807,0,0.287536413054709,0,1.10115880999389,2.29837208553338,2.30409799884365,0.395658863190582,0.274462930807229,0,2.23346399201105,1.68828783009504,1.83357897332172,1.76777151284201,1.70846016958924,0.372798891650601,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.25668024088073,0,0,0,0,2.54644086988199,0.915001205637253,1.13088916901578,4.34560800480691,3.06858548796397,2.49345653471472,0.973447578406546,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.896796041993948,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,1.86070473834252,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,4.58316410751517,11.6860163993708,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,5.89085131679466,2.07104124700728,0,0,0,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr4:46800475..46800496,+ | |||
}} |
Revision as of 05:07, 14 September 2013
Short description: | p@chr4:46800475..46800496, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:46800475..46800496, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-13 | 23 |
neuron of the substantia nigra | 1.05e-09 | 3 |
raphe nuclei neuron | 1.21e-09 | 3 |
neuron | 8.43e-09 | 33 |
neuronal stem cell | 8.43e-09 | 33 |
neuroblast | 8.43e-09 | 33 |
electrically signaling cell | 8.43e-09 | 33 |
electrically responsive cell | 3.88e-07 | 39 |
electrically active cell | 3.88e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.