FFCP PHASE1:Mm9::chr11:104171642..104171655,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=596|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:104171642..104171655,+|id=chr11:104171642..104171655,+|ontology_enrichment_celltype=CL:0000540!9.07e-21!33;CL:0000047!9.07e-21!33;CL:0000031!9.07e-21!33;CL:0000404!9.07e-21!33;CL:0000117!8.23e-20!23;CL:0000337!8.23e-20!23;CL:0000221!5.14e-17!44;CL:0000133!5.14e-17!44;CL:0002319!1.56e-16!43;CL:0000393!4.54e-16!39;CL:0000211!4.54e-16!39;CL:0000055!8.14e-13!50;CL:0002321!4.02e-07!70;CL:0000220!4.02e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-29,23;CL:0000337,2.72e-29,23;CL:0000540,3.16e-27,33;CL:0000047,3.16e-27,33;CL:0000031,3.16e-27,33;CL:0000404,3.16e-27,33;CL:0002319,1.12e-23,43;CL:0000221,4.30e-23,44;CL:0000133,4.30e-23,44;CL:0000393,9.72e-23,39;CL:0000211,9.72e-23,39;CL:0002613,1.30e-15,3;CL:0002321,1.01e-13,70;CL:0000723,1.48e-08,91;CL:0000048,1.48e-08,91;CL:0002612,5.68e-08,3;CL:0000034,6.82e-08,97;CL:0002614,1.78e-07,3;CL:0000120,2.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.70e-24!73;UBERON:0005743!5.70e-24!73;UBERON:0000073!6.70e-23!75;UBERON:0001016!6.70e-23!75;UBERON:0004121!1.33e-19!102;UBERON:0000924!1.33e-19!102;UBERON:0006601!1.33e-19!102;UBERON:0002346!7.86e-18!71;UBERON:0003075!7.86e-18!71;UBERON:0007284!7.86e-18!71;UBERON:0002020!1.62e-16!34;UBERON:0001049!2.37e-16!52;UBERON:0005068!2.37e-16!52;UBERON:0006241!2.37e-16!52;UBERON:0007135!2.37e-16!52;UBERON:0000955!8.14e-13!50;UBERON:0006238!8.14e-13!50;UBERON:0002616!3.40e-12!49;UBERON:0000033!4.00e-12!63;UBERON:0002791!9.80e-12!29;UBERON:0003528!9.80e-12!29;UBERON:0001893!9.80e-12!29;UBERON:0003080!1.82e-10!40;UBERON:0002780!5.07e-10!39;UBERON:0001890!5.07e-10!39;UBERON:0006240!5.07e-10!39;UBERON:0002420!7.12e-10!8;UBERON:0007245!7.12e-10!8;UBERON:0010009!7.12e-10!8;UBERON:0010011!7.12e-10!8;UBERON:0000454!7.12e-10!8;UBERON:0003056!1.26e-09!49;UBERON:0002240!1.35e-07!6;UBERON:0005174!1.35e-07!6;UBERON:0001137!1.35e-07!6;UBERON:0003076!3.44e-07!12;UBERON:0003057!3.44e-07!12;UBERON:0001948!7.11e-07!5;UBERON:0002315!7.11e-07!5;UBERON:0000369!7.70e-07!5;UBERON:0002435!7.70e-07!5;UBERON:0000204!7.70e-07!5;UBERON:0010082!7.70e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.22e-20,73;UBERON:0002020,2.08e-19,34;UBERON:0001016,3.57e-19,75;UBERON:0002420,1.92e-15,8;UBERON:0007245,1.92e-15,8;UBERON:0010009,1.92e-15,8;UBERON:0010011,1.92e-15,8;UBERON:0000454,1.92e-15,8;UBERON:0002346,2.13e-15,64;UBERON:0003075,2.13e-15,64;UBERON:0007284,2.13e-15,64;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0001049,1.97e-14,52;UBERON:0005068,1.97e-14,52;UBERON:0006241,1.97e-14,52;UBERON:0007135,1.97e-14,52;UBERON:0000073,7.97e-14,54;UBERON:0010371,3.13e-13,73;UBERON:0003528,1.07e-12,29;UBERON:0002791,1.07e-12,29;UBERON:0001893,1.07e-12,29;UBERON:0010314,4.92e-10,92;UBERON:0001948,9.26e-10,5;UBERON:0002315,9.26e-10,5;UBERON:0000369,1.39e-09,5;UBERON:0002435,1.39e-09,5;UBERON:0000204,1.39e-09,5;UBERON:0010082,1.39e-09,5;UBERON:0002616,1.75e-09,46;UBERON:0000955,2.99e-09,47;UBERON:0006238,2.99e-09,47;UBERON:0002780,3.90e-09,39;UBERON:0001890,3.90e-09,39;UBERON:0006240,3.90e-09,39;UBERON:0003080,7.08e-09,40;UBERON:0002240,3.27e-08,6;UBERON:0005174,3.27e-08,6;UBERON:0001137,3.27e-08,6;UBERON:0002257,5.68e-08,3;UBERON:0002038,1.78e-07,3;UBERON:0009663,1.78e-07,3;UBERON:0009661,1.78e-07,3;UBERON:0000125,1.78e-07,3;UBERON:0002308,1.78e-07,3;UBERON:0010313,3.22e-07,3;UBERON:0002342,3.22e-07,3;UBERON:0002005,3.22e-07,3;UBERON:0005428,3.22e-07,3;UBERON:0005062,3.22e-07,3;UBERON:0003076,4.36e-07,12;UBERON:0003057,4.36e-07,12;UBERON:0003056,5.06e-07,49|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,1.35005938331691,1.47227472945967,1.14260393761521,0.662605622854841,0.244981598429908,0.575072826109418,0,0,0.383062014255563,0.307213066512487,1.58263545276233,1.73826522844578,1.04182674111352,0.558365998002762,1.12552522006336,1.5279824777681,0.883885756421003,1.99320353118744,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0,3.97948742945565,0,0,0,0,0.149790639404823,0.915001205637253,0.753926112677186,0.173824320192276,0.767146371990992,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0.60281927134286,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0.94652465824877,1.17131623288992,1.07711698866399,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,1.5107877947794,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0.798049746802062,0,0,0,0.183843508450014,0,0.824140228955577,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0.57386499620653,0,0|short_description=p@chr11:104171642..104171655,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=596 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:104171642..104171655,+ | |||
|id=chr11:104171642..104171655,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.07e-21!33;CL:0000047!9.07e-21!33;CL:0000031!9.07e-21!33;CL:0000404!9.07e-21!33;CL:0000117!8.23e-20!23;CL:0000337!8.23e-20!23;CL:0000221!5.14e-17!44;CL:0000133!5.14e-17!44;CL:0002319!1.56e-16!43;CL:0000393!4.54e-16!39;CL:0000211!4.54e-16!39;CL:0000055!8.14e-13!50;CL:0002321!4.02e-07!70;CL:0000220!4.02e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-29,23;CL:0000337,2.72e-29,23;CL:0000540,3.16e-27,33;CL:0000047,3.16e-27,33;CL:0000031,3.16e-27,33;CL:0000404,3.16e-27,33;CL:0002319,1.12e-23,43;CL:0000221,4.30e-23,44;CL:0000133,4.30e-23,44;CL:0000393,9.72e-23,39;CL:0000211,9.72e-23,39;CL:0002613,1.30e-15,3;CL:0002321,1.01e-13,70;CL:0000723,1.48e-08,91;CL:0000048,1.48e-08,91;CL:0002612,5.68e-08,3;CL:0000034,6.82e-08,97;CL:0002614,1.78e-07,3;CL:0000120,2.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.70e-24!73;UBERON:0005743!5.70e-24!73;UBERON:0000073!6.70e-23!75;UBERON:0001016!6.70e-23!75;UBERON:0004121!1.33e-19!102;UBERON:0000924!1.33e-19!102;UBERON:0006601!1.33e-19!102;UBERON:0002346!7.86e-18!71;UBERON:0003075!7.86e-18!71;UBERON:0007284!7.86e-18!71;UBERON:0002020!1.62e-16!34;UBERON:0001049!2.37e-16!52;UBERON:0005068!2.37e-16!52;UBERON:0006241!2.37e-16!52;UBERON:0007135!2.37e-16!52;UBERON:0000955!8.14e-13!50;UBERON:0006238!8.14e-13!50;UBERON:0002616!3.40e-12!49;UBERON:0000033!4.00e-12!63;UBERON:0002791!9.80e-12!29;UBERON:0003528!9.80e-12!29;UBERON:0001893!9.80e-12!29;UBERON:0003080!1.82e-10!40;UBERON:0002780!5.07e-10!39;UBERON:0001890!5.07e-10!39;UBERON:0006240!5.07e-10!39;UBERON:0002420!7.12e-10!8;UBERON:0007245!7.12e-10!8;UBERON:0010009!7.12e-10!8;UBERON:0010011!7.12e-10!8;UBERON:0000454!7.12e-10!8;UBERON:0003056!1.26e-09!49;UBERON:0002240!1.35e-07!6;UBERON:0005174!1.35e-07!6;UBERON:0001137!1.35e-07!6;UBERON:0003076!3.44e-07!12;UBERON:0003057!3.44e-07!12;UBERON:0001948!7.11e-07!5;UBERON:0002315!7.11e-07!5;UBERON:0000369!7.70e-07!5;UBERON:0002435!7.70e-07!5;UBERON:0000204!7.70e-07!5;UBERON:0010082!7.70e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.22e-20,73;UBERON:0002020,2.08e-19,34;UBERON:0001016,3.57e-19,75;UBERON:0002420,1.92e-15,8;UBERON:0007245,1.92e-15,8;UBERON:0010009,1.92e-15,8;UBERON:0010011,1.92e-15,8;UBERON:0000454,1.92e-15,8;UBERON:0002346,2.13e-15,64;UBERON:0003075,2.13e-15,64;UBERON:0007284,2.13e-15,64;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0001049,1.97e-14,52;UBERON:0005068,1.97e-14,52;UBERON:0006241,1.97e-14,52;UBERON:0007135,1.97e-14,52;UBERON:0000073,7.97e-14,54;UBERON:0010371,3.13e-13,73;UBERON:0003528,1.07e-12,29;UBERON:0002791,1.07e-12,29;UBERON:0001893,1.07e-12,29;UBERON:0010314,4.92e-10,92;UBERON:0001948,9.26e-10,5;UBERON:0002315,9.26e-10,5;UBERON:0000369,1.39e-09,5;UBERON:0002435,1.39e-09,5;UBERON:0000204,1.39e-09,5;UBERON:0010082,1.39e-09,5;UBERON:0002616,1.75e-09,46;UBERON:0000955,2.99e-09,47;UBERON:0006238,2.99e-09,47;UBERON:0002780,3.90e-09,39;UBERON:0001890,3.90e-09,39;UBERON:0006240,3.90e-09,39;UBERON:0003080,7.08e-09,40;UBERON:0002240,3.27e-08,6;UBERON:0005174,3.27e-08,6;UBERON:0001137,3.27e-08,6;UBERON:0002257,5.68e-08,3;UBERON:0002038,1.78e-07,3;UBERON:0009663,1.78e-07,3;UBERON:0009661,1.78e-07,3;UBERON:0000125,1.78e-07,3;UBERON:0002308,1.78e-07,3;UBERON:0010313,3.22e-07,3;UBERON:0002342,3.22e-07,3;UBERON:0002005,3.22e-07,3;UBERON:0005428,3.22e-07,3;UBERON:0005062,3.22e-07,3;UBERON:0003076,4.36e-07,12;UBERON:0003057,4.36e-07,12;UBERON:0003056,5.06e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,1.35005938331691,1.47227472945967,1.14260393761521,0.662605622854841,0.244981598429908,0.575072826109418,0,0,0.383062014255563,0.307213066512487,1.58263545276233,1.73826522844578,1.04182674111352,0.558365998002762,1.12552522006336,1.5279824777681,0.883885756421003,1.99320353118744,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0,3.97948742945565,0,0,0,0,0.149790639404823,0.915001205637253,0.753926112677186,0.173824320192276,0.767146371990992,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0.60281927134286,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0.94652465824877,1.17131623288992,1.07711698866399,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,1.5107877947794,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0.798049746802062,0,0,0,0.183843508450014,0,0.824140228955577,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p@chr11:104171642..104171655,+ | |||
}} |
Revision as of 18:27, 12 September 2013
Short description: | p@chr11:104171642..104171655, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104171642..104171655, + |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.72e-29 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-29 | 23 |
neuron | 3.16e-27 | 33 |
neuronal stem cell | 3.16e-27 | 33 |
neuroblast | 3.16e-27 | 33 |
electrically signaling cell | 3.16e-27 | 33 |
neural cell | 1.12e-23 | 43 |
ectodermal cell | 4.30e-23 | 44 |
neurectodermal cell | 4.30e-23 | 44 |
electrically responsive cell | 9.72e-23 | 39 |
electrically active cell | 9.72e-23 | 39 |
striatum neuron | 1.30e-15 | 3 |
embryonic cell | 1.01e-13 | 70 |
somatic stem cell | 1.48e-08 | 91 |
multi fate stem cell | 1.48e-08 | 91 |
neuron of the ventral spinal cord | 5.68e-08 | 3 |
stem cell | 6.82e-08 | 97 |
neuron of the substantia nigra | 1.78e-07 | 3 |
granule cell | 2.78e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.