FFCP PHASE1:Mm9::chr3:126645733..126645745,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:126645733..126645745,-|id=chr3:126645733..126645745,-|ontology_enrichment_celltype=CL:0000540!5.79e-15!33;CL:0000047!5.79e-15!33;CL:0000031!5.79e-15!33;CL:0000404!5.79e-15!33;CL:0000117!9.10e-13!23;CL:0000337!9.10e-13!23;CL:0000393!8.01e-11!39;CL:0000211!8.01e-11!39;CL:0002319!2.55e-09!43;CL:0000221!7.39e-09!44;CL:0000133!7.39e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-11,23;CL:0000337,1.87e-11,23;CL:0000540,2.11e-08,33;CL:0000047,2.11e-08,33;CL:0000031,2.11e-08,33;CL:0000404,2.11e-08,33;CL:0002610,1.30e-07,3;CL:0002614,4.62e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.66e-27!71;UBERON:0003075!2.66e-27!71;UBERON:0007284!2.66e-27!71;UBERON:0001017!5.76e-26!73;UBERON:0005743!5.76e-26!73;UBERON:0000073!2.43e-25!75;UBERON:0001016!2.43e-25!75;UBERON:0004121!8.74e-24!102;UBERON:0000924!8.74e-24!102;UBERON:0006601!8.74e-24!102;UBERON:0000033!2.31e-22!63;UBERON:0001049!6.71e-22!52;UBERON:0005068!6.71e-22!52;UBERON:0006241!6.71e-22!52;UBERON:0007135!6.71e-22!52;UBERON:0000955!4.15e-21!50;UBERON:0006238!4.15e-21!50;UBERON:0002616!2.67e-20!49;UBERON:0003056!9.31e-20!49;UBERON:0002020!2.05e-17!34;UBERON:0003080!1.62e-16!40;UBERON:0002780!6.76e-16!39;UBERON:0001890!6.76e-16!39;UBERON:0006240!6.76e-16!39;UBERON:0002791!3.76e-14!29;UBERON:0003528!3.76e-14!29;UBERON:0001893!3.76e-14!29;UBERON:0007811!2.09e-11!86;UBERON:0000153!9.92e-11!94;UBERON:0000956!1.42e-08!21;UBERON:0001869!1.42e-08!21;UBERON:0000203!1.42e-08!21;UBERON:0002420!2.87e-07!8;UBERON:0007245!2.87e-07!8;UBERON:0010009!2.87e-07!8;UBERON:0010011!2.87e-07!8;UBERON:0000454!2.87e-07!8;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-29,54;UBERON:0001017,1.26e-26,73;UBERON:0001016,1.06e-25,75;UBERON:0001049,1.29e-25,52;UBERON:0005068,1.29e-25,52;UBERON:0006241,1.29e-25,52;UBERON:0007135,1.29e-25,52;UBERON:0002346,5.50e-25,64;UBERON:0003075,5.50e-25,64;UBERON:0007284,5.50e-25,64;UBERON:0000955,2.75e-24,47;UBERON:0006238,2.75e-24,47;UBERON:0002020,3.33e-23,34;UBERON:0004121,3.64e-23,95;UBERON:0000924,3.64e-23,95;UBERON:0006601,3.64e-23,95;UBERON:0002616,1.04e-22,46;UBERON:0003528,4.06e-22,29;UBERON:0002791,4.06e-22,29;UBERON:0001893,4.06e-22,29;UBERON:0010371,5.61e-21,73;UBERON:0003056,4.06e-19,49;UBERON:0003080,3.15e-18,40;UBERON:0002780,5.15e-17,39;UBERON:0001890,5.15e-17,39;UBERON:0006240,5.15e-17,39;UBERON:0010314,2.42e-16,92;UBERON:0002619,7.33e-13,17;UBERON:0002021,1.12e-12,10;UBERON:0000411,1.12e-12,10;UBERON:0001950,1.12e-12,10;UBERON:0002420,1.64e-12,8;UBERON:0007245,1.64e-12,8;UBERON:0010009,1.64e-12,8;UBERON:0010011,1.64e-12,8;UBERON:0000454,1.64e-12,8;UBERON:0000956,6.01e-12,21;UBERON:0001869,6.01e-12,21;UBERON:0000203,6.01e-12,21;UBERON:0002950,1.74e-08,4;UBERON:0001891,1.74e-08,4;UBERON:0009616,1.74e-08,4;UBERON:0010286,1.74e-08,4;UBERON:0000025,5.32e-08,114;UBERON:0003076,5.65e-08,12;UBERON:0003057,5.65e-08,12;UBERON:0004684,1.30e-07,3;UBERON:0002275,1.30e-07,3;UBERON:0000369,3.50e-07,5;UBERON:0002435,3.50e-07,5;UBERON:0000204,3.50e-07,5;UBERON:0010082,3.50e-07,5;UBERON:0002038,4.62e-07,3;UBERON:0009663,4.62e-07,3;UBERON:0009661,4.62e-07,3;UBERON:0000125,4.62e-07,3;UBERON:0002308,4.62e-07,3;UBERON:0004111,4.70e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,3.1739458756322,0,0,0,0,0,0,0,0,0.518448061542388,0.945041568321835,0.841299845405528,0.856952953211411,0.883474163806454,1.22490799214954,0.479227355091182,0,3.30347642998166,2.68143409978894,3.37934373163736,0.923204014111357,2.56165402086747,2.6045668527838,1.95428099300967,2.25105044012672,3.20876320331301,7.36571463684169,4.27115042397309,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,1.52232739156071,0.922461989024234,0.452167921657868,0.470354828542819,0,0,0,0,0,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,1.3481157546434,1.83000241127451,3.76963056338593,2.08589184230732,4.09144731728529,0.62336413367868,1.78465389374533,0.203678727700633,0,0,0,0.390361328888111,0.689706313300419,0.180062129805349,1.80845781402858,0.612328492361951,1.66547836370305,0.655912071918102,4.39795730256327,0,0,0,0,1.11218899690239,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0,0,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0,1.47202963994889,3.2929475961371,0,0,0,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,2.56880943980467,2.10981035865966,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0.566153061577665,0,1.46127928955656,0.790575555893047,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.713475270408282,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,4.51801474093653,4.14292712856459,4.01026859407578,2.92150409984269,0,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,2.07104124700728,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0,0.412070114477788,0,0.505394423527595,1.01391719956096,0.754505365544305,0.561849044819294,0.512201219238954,0.631790158511746,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,2.63069711437843,0.814824683075171,2.24456908663095,0.474540072496697,0.788035859004508,0.409231043169689,1.08455788830176,0,0.499621155875892,0.467863216890817,0,0,0.220591419119515,0|short_description=p@chr3:126645733..126645745,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:126645733..126645745,- | |||
|id=chr3:126645733..126645745,- | |||
|ontology_enrichment_celltype=CL:0000540!5.79e-15!33;CL:0000047!5.79e-15!33;CL:0000031!5.79e-15!33;CL:0000404!5.79e-15!33;CL:0000117!9.10e-13!23;CL:0000337!9.10e-13!23;CL:0000393!8.01e-11!39;CL:0000211!8.01e-11!39;CL:0002319!2.55e-09!43;CL:0000221!7.39e-09!44;CL:0000133!7.39e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-11,23;CL:0000337,1.87e-11,23;CL:0000540,2.11e-08,33;CL:0000047,2.11e-08,33;CL:0000031,2.11e-08,33;CL:0000404,2.11e-08,33;CL:0002610,1.30e-07,3;CL:0002614,4.62e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.66e-27!71;UBERON:0003075!2.66e-27!71;UBERON:0007284!2.66e-27!71;UBERON:0001017!5.76e-26!73;UBERON:0005743!5.76e-26!73;UBERON:0000073!2.43e-25!75;UBERON:0001016!2.43e-25!75;UBERON:0004121!8.74e-24!102;UBERON:0000924!8.74e-24!102;UBERON:0006601!8.74e-24!102;UBERON:0000033!2.31e-22!63;UBERON:0001049!6.71e-22!52;UBERON:0005068!6.71e-22!52;UBERON:0006241!6.71e-22!52;UBERON:0007135!6.71e-22!52;UBERON:0000955!4.15e-21!50;UBERON:0006238!4.15e-21!50;UBERON:0002616!2.67e-20!49;UBERON:0003056!9.31e-20!49;UBERON:0002020!2.05e-17!34;UBERON:0003080!1.62e-16!40;UBERON:0002780!6.76e-16!39;UBERON:0001890!6.76e-16!39;UBERON:0006240!6.76e-16!39;UBERON:0002791!3.76e-14!29;UBERON:0003528!3.76e-14!29;UBERON:0001893!3.76e-14!29;UBERON:0007811!2.09e-11!86;UBERON:0000153!9.92e-11!94;UBERON:0000956!1.42e-08!21;UBERON:0001869!1.42e-08!21;UBERON:0000203!1.42e-08!21;UBERON:0002420!2.87e-07!8;UBERON:0007245!2.87e-07!8;UBERON:0010009!2.87e-07!8;UBERON:0010011!2.87e-07!8;UBERON:0000454!2.87e-07!8;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-29,54;UBERON:0001017,1.26e-26,73;UBERON:0001016,1.06e-25,75;UBERON:0001049,1.29e-25,52;UBERON:0005068,1.29e-25,52;UBERON:0006241,1.29e-25,52;UBERON:0007135,1.29e-25,52;UBERON:0002346,5.50e-25,64;UBERON:0003075,5.50e-25,64;UBERON:0007284,5.50e-25,64;UBERON:0000955,2.75e-24,47;UBERON:0006238,2.75e-24,47;UBERON:0002020,3.33e-23,34;UBERON:0004121,3.64e-23,95;UBERON:0000924,3.64e-23,95;UBERON:0006601,3.64e-23,95;UBERON:0002616,1.04e-22,46;UBERON:0003528,4.06e-22,29;UBERON:0002791,4.06e-22,29;UBERON:0001893,4.06e-22,29;UBERON:0010371,5.61e-21,73;UBERON:0003056,4.06e-19,49;UBERON:0003080,3.15e-18,40;UBERON:0002780,5.15e-17,39;UBERON:0001890,5.15e-17,39;UBERON:0006240,5.15e-17,39;UBERON:0010314,2.42e-16,92;UBERON:0002619,7.33e-13,17;UBERON:0002021,1.12e-12,10;UBERON:0000411,1.12e-12,10;UBERON:0001950,1.12e-12,10;UBERON:0002420,1.64e-12,8;UBERON:0007245,1.64e-12,8;UBERON:0010009,1.64e-12,8;UBERON:0010011,1.64e-12,8;UBERON:0000454,1.64e-12,8;UBERON:0000956,6.01e-12,21;UBERON:0001869,6.01e-12,21;UBERON:0000203,6.01e-12,21;UBERON:0002950,1.74e-08,4;UBERON:0001891,1.74e-08,4;UBERON:0009616,1.74e-08,4;UBERON:0010286,1.74e-08,4;UBERON:0000025,5.32e-08,114;UBERON:0003076,5.65e-08,12;UBERON:0003057,5.65e-08,12;UBERON:0004684,1.30e-07,3;UBERON:0002275,1.30e-07,3;UBERON:0000369,3.50e-07,5;UBERON:0002435,3.50e-07,5;UBERON:0000204,3.50e-07,5;UBERON:0010082,3.50e-07,5;UBERON:0002038,4.62e-07,3;UBERON:0009663,4.62e-07,3;UBERON:0009661,4.62e-07,3;UBERON:0000125,4.62e-07,3;UBERON:0002308,4.62e-07,3;UBERON:0004111,4.70e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,3.1739458756322,0,0,0,0,0,0,0,0,0.518448061542388,0.945041568321835,0.841299845405528,0.856952953211411,0.883474163806454,1.22490799214954,0.479227355091182,0,3.30347642998166,2.68143409978894,3.37934373163736,0.923204014111357,2.56165402086747,2.6045668527838,1.95428099300967,2.25105044012672,3.20876320331301,7.36571463684169,4.27115042397309,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,1.52232739156071,0.922461989024234,0.452167921657868,0.470354828542819,0,0,0,0,0,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,1.3481157546434,1.83000241127451,3.76963056338593,2.08589184230732,4.09144731728529,0.62336413367868,1.78465389374533,0.203678727700633,0,0,0,0.390361328888111,0.689706313300419,0.180062129805349,1.80845781402858,0.612328492361951,1.66547836370305,0.655912071918102,4.39795730256327,0,0,0,0,1.11218899690239,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0,0,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0,1.47202963994889,3.2929475961371,0,0,0,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,2.56880943980467,2.10981035865966,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0.566153061577665,0,1.46127928955656,0.790575555893047,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.713475270408282,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,4.51801474093653,4.14292712856459,4.01026859407578,2.92150409984269,0,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,2.07104124700728,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0,0.412070114477788,0,0.505394423527595,1.01391719956096,0.754505365544305,0.561849044819294,0.512201219238954,0.631790158511746,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,2.63069711437843,0.814824683075171,2.24456908663095,0.474540072496697,0.788035859004508,0.409231043169689,1.08455788830176,0,0.499621155875892,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p@chr3:126645733..126645745,- | |||
}} |
Revision as of 01:27, 14 September 2013
Short description: | p@chr3:126645733..126645745, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:126645733..126645745, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-11 | 23 |
neuron | 2.11e-08 | 33 |
neuronal stem cell | 2.11e-08 | 33 |
neuroblast | 2.11e-08 | 33 |
electrically signaling cell | 2.11e-08 | 33 |
raphe nuclei neuron | 1.30e-07 | 3 |
neuron of the substantia nigra | 4.62e-07 | 3 |
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