FFCP PHASE1:Mm9::chr7:62090947..62090956,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233271|HGNC=|MCL_coexpression_id=1|UniProt=Q8BGY3|association_with_transcript=332bp_to_NM_178705,uc009hcw.1,uc009hcx.1_5end|description=CAGE_peak_5_at_Luzp2_5end|id=chr7:62090947..62090956,+|ontology_enrichment_celltype=CL:0000221!5.01e-13!44;CL:0000133!5.01e-13!44;CL:0002319!1.98e-12!43;CL:0000117!9.87e-12!23;CL:0000337!9.87e-12!23;CL:0000540!7.17e-11!33;CL:0000047!7.17e-11!33;CL:0000031!7.17e-11!33;CL:0000404!7.17e-11!33;CL:0000055!3.00e-09!50;CL:0000393!5.94e-08!39;CL:0000211!5.94e-08!39|ontology_enrichment_celltype_v019_2=CL:0002610,2.54e-08,3;CL:0000117,3.58e-08,23;CL:0000337,3.58e-08,23;CL:0002614,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.22e-33!75;UBERON:0001016!9.22e-33!75;UBERON:0001017!1.40e-31!73;UBERON:0005743!1.40e-31!73;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0004121!2.09e-24!102;UBERON:0000924!2.09e-24!102;UBERON:0006601!2.09e-24!102;UBERON:0000955!3.57e-24!50;UBERON:0006238!3.57e-24!50;UBERON:0002616!3.80e-23!49;UBERON:0000033!2.56e-21!63;UBERON:0002020!6.94e-21!34;UBERON:0002346!2.84e-18!71;UBERON:0003075!2.84e-18!71;UBERON:0007284!2.84e-18!71;UBERON:0003080!3.20e-18!40;UBERON:0002780!2.62e-17!39;UBERON:0001890!2.62e-17!39;UBERON:0006240!2.62e-17!39;UBERON:0002791!3.15e-17!29;UBERON:0003528!3.15e-17!29;UBERON:0001893!3.15e-17!29;UBERON:0003056!1.49e-15!49;UBERON:0007811!5.36e-13!86;UBERON:0000956!1.91e-11!21;UBERON:0001869!1.91e-11!21;UBERON:0000203!1.91e-11!21;UBERON:0000153!3.94e-11!94;UBERON:0002619!1.23e-10!17;UBERON:0002021!2.46e-10!10;UBERON:0000411!2.46e-10!10;UBERON:0001950!2.46e-10!10;UBERON:0003076!2.32e-07!12;UBERON:0003057!2.32e-07!12;UBERON:0002420!3.86e-07!8;UBERON:0007245!3.86e-07!8;UBERON:0010009!3.86e-07!8;UBERON:0010011!3.86e-07!8;UBERON:0000454!3.86e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.49e-35,75;UBERON:0000073,5.44e-35,54;UBERON:0001017,1.52e-34,73;UBERON:0000955,1.25e-32,47;UBERON:0006238,1.25e-32,47;UBERON:0001049,4.50e-31,52;UBERON:0005068,4.50e-31,52;UBERON:0006241,4.50e-31,52;UBERON:0007135,4.50e-31,52;UBERON:0002616,1.57e-30,46;UBERON:0004121,1.45e-26,95;UBERON:0000924,1.45e-26,95;UBERON:0006601,1.45e-26,95;UBERON:0003528,1.29e-25,29;UBERON:0002791,1.29e-25,29;UBERON:0001893,1.29e-25,29;UBERON:0003080,2.00e-24,40;UBERON:0002346,4.71e-24,64;UBERON:0003075,4.71e-24,64;UBERON:0007284,4.71e-24,64;UBERON:0002020,1.18e-23,34;UBERON:0002021,4.34e-23,10;UBERON:0000411,4.34e-23,10;UBERON:0001950,4.34e-23,10;UBERON:0002780,1.41e-22,39;UBERON:0001890,1.41e-22,39;UBERON:0006240,1.41e-22,39;UBERON:0010371,2.66e-20,73;UBERON:0003056,5.56e-19,49;UBERON:0002619,2.18e-18,17;UBERON:0000956,4.04e-17,21;UBERON:0001869,4.04e-17,21;UBERON:0000203,4.04e-17,21;UBERON:0010314,8.58e-15,92;UBERON:0000025,1.03e-10,114;UBERON:0002950,1.10e-09,4;UBERON:0001891,1.10e-09,4;UBERON:0009616,1.10e-09,4;UBERON:0010286,1.10e-09,4;UBERON:0002420,1.16e-09,8;UBERON:0007245,1.16e-09,8;UBERON:0010009,1.16e-09,8;UBERON:0010011,1.16e-09,8;UBERON:0000454,1.16e-09,8;UBERON:0004111,1.34e-09,122;UBERON:0011216,3.00e-09,194;UBERON:0004684,2.54e-08,3;UBERON:0002275,2.54e-08,3;UBERON:0002038,2.23e-07,3;UBERON:0009663,2.23e-07,3;UBERON:0009661,2.23e-07,3;UBERON:0000125,2.23e-07,3;UBERON:0002308,2.23e-07,3;UBERON:0004733,3.49e-07,6;UBERON:0004732,3.49e-07,6;UBERON:0002028,3.49e-07,6;UBERON:0007277,3.49e-07,6;UBERON:0003076,4.84e-07,12;UBERON:0003057,4.84e-07,12|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0.405017814995072,0.210324961351382,0.856952953211411,0.662605622854841,0.244981598429908,0.287536413054709,0,2.20231761998777,2.68143409978894,3.68655679814984,0.395658863190582,0.365950574409639,1.04182674111352,1.11673199600552,2.25105044012672,1.5279824777681,1.76777151284201,0.854230084794618,0.745597783301202,0.151452386666368,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,3.56059401582874,0,0,0,0,3.2953940669061,2.28750301409313,1.50785222535437,3.12883776346098,2.81287003063364,3.74018480207208,1.94689515681309,0.203678727700633,0,0,0,0,0,0,0.30140963567143,0.340182495756639,0.2562274405697,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,2.3131894342054,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.39913891117389,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0.395287777946524,4.4984984299053,0,0.178065603667255,0.1628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| ||
|EntrezGene=233271 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BGY3 | |||
|association_with_transcript=332bp_to_NM_178705,uc009hcw.1,uc009hcx.1_5end | |||
|description=CAGE_peak_5_at_Luzp2_5end | |||
|id=chr7:62090947..62090956,+ | |||
|ontology_enrichment_celltype=CL:0000221!5.01e-13!44;CL:0000133!5.01e-13!44;CL:0002319!1.98e-12!43;CL:0000117!9.87e-12!23;CL:0000337!9.87e-12!23;CL:0000540!7.17e-11!33;CL:0000047!7.17e-11!33;CL:0000031!7.17e-11!33;CL:0000404!7.17e-11!33;CL:0000055!3.00e-09!50;CL:0000393!5.94e-08!39;CL:0000211!5.94e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.54e-08,3;CL:0000117,3.58e-08,23;CL:0000337,3.58e-08,23;CL:0002614,2.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.22e-33!75;UBERON:0001016!9.22e-33!75;UBERON:0001017!1.40e-31!73;UBERON:0005743!1.40e-31!73;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0004121!2.09e-24!102;UBERON:0000924!2.09e-24!102;UBERON:0006601!2.09e-24!102;UBERON:0000955!3.57e-24!50;UBERON:0006238!3.57e-24!50;UBERON:0002616!3.80e-23!49;UBERON:0000033!2.56e-21!63;UBERON:0002020!6.94e-21!34;UBERON:0002346!2.84e-18!71;UBERON:0003075!2.84e-18!71;UBERON:0007284!2.84e-18!71;UBERON:0003080!3.20e-18!40;UBERON:0002780!2.62e-17!39;UBERON:0001890!2.62e-17!39;UBERON:0006240!2.62e-17!39;UBERON:0002791!3.15e-17!29;UBERON:0003528!3.15e-17!29;UBERON:0001893!3.15e-17!29;UBERON:0003056!1.49e-15!49;UBERON:0007811!5.36e-13!86;UBERON:0000956!1.91e-11!21;UBERON:0001869!1.91e-11!21;UBERON:0000203!1.91e-11!21;UBERON:0000153!3.94e-11!94;UBERON:0002619!1.23e-10!17;UBERON:0002021!2.46e-10!10;UBERON:0000411!2.46e-10!10;UBERON:0001950!2.46e-10!10;UBERON:0003076!2.32e-07!12;UBERON:0003057!2.32e-07!12;UBERON:0002420!3.86e-07!8;UBERON:0007245!3.86e-07!8;UBERON:0010009!3.86e-07!8;UBERON:0010011!3.86e-07!8;UBERON:0000454!3.86e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.49e-35,75;UBERON:0000073,5.44e-35,54;UBERON:0001017,1.52e-34,73;UBERON:0000955,1.25e-32,47;UBERON:0006238,1.25e-32,47;UBERON:0001049,4.50e-31,52;UBERON:0005068,4.50e-31,52;UBERON:0006241,4.50e-31,52;UBERON:0007135,4.50e-31,52;UBERON:0002616,1.57e-30,46;UBERON:0004121,1.45e-26,95;UBERON:0000924,1.45e-26,95;UBERON:0006601,1.45e-26,95;UBERON:0003528,1.29e-25,29;UBERON:0002791,1.29e-25,29;UBERON:0001893,1.29e-25,29;UBERON:0003080,2.00e-24,40;UBERON:0002346,4.71e-24,64;UBERON:0003075,4.71e-24,64;UBERON:0007284,4.71e-24,64;UBERON:0002020,1.18e-23,34;UBERON:0002021,4.34e-23,10;UBERON:0000411,4.34e-23,10;UBERON:0001950,4.34e-23,10;UBERON:0002780,1.41e-22,39;UBERON:0001890,1.41e-22,39;UBERON:0006240,1.41e-22,39;UBERON:0010371,2.66e-20,73;UBERON:0003056,5.56e-19,49;UBERON:0002619,2.18e-18,17;UBERON:0000956,4.04e-17,21;UBERON:0001869,4.04e-17,21;UBERON:0000203,4.04e-17,21;UBERON:0010314,8.58e-15,92;UBERON:0000025,1.03e-10,114;UBERON:0002950,1.10e-09,4;UBERON:0001891,1.10e-09,4;UBERON:0009616,1.10e-09,4;UBERON:0010286,1.10e-09,4;UBERON:0002420,1.16e-09,8;UBERON:0007245,1.16e-09,8;UBERON:0010009,1.16e-09,8;UBERON:0010011,1.16e-09,8;UBERON:0000454,1.16e-09,8;UBERON:0004111,1.34e-09,122;UBERON:0011216,3.00e-09,194;UBERON:0004684,2.54e-08,3;UBERON:0002275,2.54e-08,3;UBERON:0002038,2.23e-07,3;UBERON:0009663,2.23e-07,3;UBERON:0009661,2.23e-07,3;UBERON:0000125,2.23e-07,3;UBERON:0002308,2.23e-07,3;UBERON:0004733,3.49e-07,6;UBERON:0004732,3.49e-07,6;UBERON:0002028,3.49e-07,6;UBERON:0007277,3.49e-07,6;UBERON:0003076,4.84e-07,12;UBERON:0003057,4.84e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0.405017814995072,0.210324961351382,0.856952953211411,0.662605622854841,0.244981598429908,0.287536413054709,0,2.20231761998777,2.68143409978894,3.68655679814984,0.395658863190582,0.365950574409639,1.04182674111352,1.11673199600552,2.25105044012672,1.5279824777681,1.76777151284201,0.854230084794618,0.745597783301202,0.151452386666368,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,3.56059401582874,0,0,0,0,3.2953940669061,2.28750301409313,1.50785222535437,3.12883776346098,2.81287003063364,3.74018480207208,1.94689515681309,0.203678727700633,0,0,0,0,0,0,0.30140963567143,0.340182495756639,0.2562274405697,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,2.3131894342054,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.39913891117389,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0.395287777946524,4.4984984299053,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.987294123612726,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,3.43737308063638,2.06223818812425,4.11049511862385,4.5323633843382,2.70009000092722,1.80128481289688,3.17199686288943,1.03552062350364,0,0,0.170733605754134,0,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.760437899670719,0,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.581385666529314,0.282328141245992,0.338458431566706,0.73171189149109,0.263069711437843,0.135804113845862,1.12228454331548,0.711810108745045,0.394017929502254,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p5@Luzp2 | |||
}} |
Revision as of 13:57, 14 September 2013
Short description: | p5@Luzp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Luzp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 332bp_to_NM_178705, uc009hcw.1, uc009hcx.1_5end |
EntrezGene: | Luzp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.54e-08 | 3 |
CNS neuron (sensu Vertebrata) | 3.58e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.58e-08 | 23 |
neuron of the substantia nigra | 2.23e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.