FFCP PHASE1:Mm9::chr13:54484003..54484014,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54484003..54484014,+|id=chr13:54484003..54484014,+|ontology_enrichment_celltype=CL:0000117!5.14e-07!23;CL:0000337!5.14e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.17e-08,3;CL:0002614,3.09e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.55e-25!63;UBERON:0002346!2.71e-24!71;UBERON:0003075!2.71e-24!71;UBERON:0007284!2.71e-24!71;UBERON:0000955!2.19e-23!50;UBERON:0006238!2.19e-23!50;UBERON:0003056!7.28e-23!49;UBERON:0001049!8.08e-23!52;UBERON:0005068!8.08e-23!52;UBERON:0006241!8.08e-23!52;UBERON:0007135!8.08e-23!52;UBERON:0002616!1.04e-22!49;UBERON:0001017!3.20e-19!73;UBERON:0005743!3.20e-19!73;UBERON:0000073!8.50e-19!75;UBERON:0001016!8.50e-19!75;UBERON:0004121!1.77e-18!102;UBERON:0000924!1.77e-18!102;UBERON:0006601!1.77e-18!102;UBERON:0003080!8.67e-18!40;UBERON:0002780!5.44e-17!39;UBERON:0001890!5.44e-17!39;UBERON:0006240!5.44e-17!39;UBERON:0002020!2.02e-14!34;UBERON:0000153!2.86e-14!94;UBERON:0007811!1.01e-13!86;UBERON:0002791!1.08e-12!29;UBERON:0003528!1.08e-12!29;UBERON:0001893!1.08e-12!29;UBERON:0002021!1.57e-10!10;UBERON:0000411!1.57e-10!10;UBERON:0001950!1.57e-10!10;UBERON:0000956!3.77e-09!21;UBERON:0001869!3.77e-09!21;UBERON:0000203!3.77e-09!21;UBERON:0000475!2.31e-08!200;UBERON:0000025!1.41e-07!114;UBERON:0002619!4.66e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.29e-38,54;UBERON:0002616,2.31e-33,46;UBERON:0000955,1.53e-32,47;UBERON:0006238,1.53e-32,47;UBERON:0001049,2.19e-31,52;UBERON:0005068,2.19e-31,52;UBERON:0006241,2.19e-31,52;UBERON:0007135,2.19e-31,52;UBERON:0003080,7.19e-30,40;UBERON:0002021,3.25e-29,10;UBERON:0000411,3.25e-29,10;UBERON:0001950,3.25e-29,10;UBERON:0001017,6.18e-29,73;UBERON:0002346,8.01e-29,64;UBERON:0003075,8.01e-29,64;UBERON:0007284,8.01e-29,64;UBERON:0003528,1.11e-28,29;UBERON:0002791,1.11e-28,29;UBERON:0001893,1.11e-28,29;UBERON:0003056,2.90e-28,49;UBERON:0001016,5.21e-28,75;UBERON:0002780,8.33e-28,39;UBERON:0001890,8.33e-28,39;UBERON:0006240,8.33e-28,39;UBERON:0002020,1.40e-26,34;UBERON:0010371,1.43e-24,73;UBERON:0004121,2.59e-24,95;UBERON:0000924,2.59e-24,95;UBERON:0006601,2.59e-24,95;UBERON:0002619,1.89e-23,17;UBERON:0000956,1.15e-21,21;UBERON:0001869,1.15e-21,21;UBERON:0000203,1.15e-21,21;UBERON:0010314,2.55e-18,92;UBERON:0000025,2.49e-11,114;UBERON:0002950,1.14e-10,4;UBERON:0001891,1.14e-10,4;UBERON:0009616,1.14e-10,4;UBERON:0010286,1.14e-10,4;UBERON:0004111,3.17e-10,122;UBERON:0004684,1.17e-08,3;UBERON:0002275,1.17e-08,3;UBERON:0002038,3.09e-08,3;UBERON:0009663,3.09e-08,3;UBERON:0009661,3.09e-08,3;UBERON:0000125,3.09e-08,3;UBERON:0002308,3.09e-08,3;UBERON:0002420,4.85e-08,8;UBERON:0007245,4.85e-08,8;UBERON:0010009,4.85e-08,8;UBERON:0010011,4.85e-08,8;UBERON:0000454,4.85e-08,8;UBERON:0011216,3.85e-07,194;UBERON:0000483,6.04e-07,174;UBERON:0000119,8.45e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.675029691658453,0.210324961351382,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,2.042997409363,4.45458946443106,0.263772575460388,0.365950574409639,0,1.3959149950069,1.12552522006336,1.37518422999129,1.17851434189467,0.711858403995515,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0.60289056221049,0.117588707135705,0.376999773989026,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.63502717310392,1.25668024088073,0,0,0,0,2.24685959107234,5.03250663100489,1.25654352112864,2.08589184230732,3.06858548796397,1.24672826735736,1.62241263067758,0.509196819251581,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,1.08858398642125,1.7935920839879,0.937017245597288,0.776110112217047,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,3.15434922846191,2.46971069710283,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0.637819074629948,0,0.172684981865896,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.428674070063185,0,1.070212905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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:54484003..54484014,+ | |||
|id=chr13:54484003..54484014,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.14e-07!23;CL:0000337!5.14e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.17e-08,3;CL:0002614,3.09e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.55e-25!63;UBERON:0002346!2.71e-24!71;UBERON:0003075!2.71e-24!71;UBERON:0007284!2.71e-24!71;UBERON:0000955!2.19e-23!50;UBERON:0006238!2.19e-23!50;UBERON:0003056!7.28e-23!49;UBERON:0001049!8.08e-23!52;UBERON:0005068!8.08e-23!52;UBERON:0006241!8.08e-23!52;UBERON:0007135!8.08e-23!52;UBERON:0002616!1.04e-22!49;UBERON:0001017!3.20e-19!73;UBERON:0005743!3.20e-19!73;UBERON:0000073!8.50e-19!75;UBERON:0001016!8.50e-19!75;UBERON:0004121!1.77e-18!102;UBERON:0000924!1.77e-18!102;UBERON:0006601!1.77e-18!102;UBERON:0003080!8.67e-18!40;UBERON:0002780!5.44e-17!39;UBERON:0001890!5.44e-17!39;UBERON:0006240!5.44e-17!39;UBERON:0002020!2.02e-14!34;UBERON:0000153!2.86e-14!94;UBERON:0007811!1.01e-13!86;UBERON:0002791!1.08e-12!29;UBERON:0003528!1.08e-12!29;UBERON:0001893!1.08e-12!29;UBERON:0002021!1.57e-10!10;UBERON:0000411!1.57e-10!10;UBERON:0001950!1.57e-10!10;UBERON:0000956!3.77e-09!21;UBERON:0001869!3.77e-09!21;UBERON:0000203!3.77e-09!21;UBERON:0000475!2.31e-08!200;UBERON:0000025!1.41e-07!114;UBERON:0002619!4.66e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.29e-38,54;UBERON:0002616,2.31e-33,46;UBERON:0000955,1.53e-32,47;UBERON:0006238,1.53e-32,47;UBERON:0001049,2.19e-31,52;UBERON:0005068,2.19e-31,52;UBERON:0006241,2.19e-31,52;UBERON:0007135,2.19e-31,52;UBERON:0003080,7.19e-30,40;UBERON:0002021,3.25e-29,10;UBERON:0000411,3.25e-29,10;UBERON:0001950,3.25e-29,10;UBERON:0001017,6.18e-29,73;UBERON:0002346,8.01e-29,64;UBERON:0003075,8.01e-29,64;UBERON:0007284,8.01e-29,64;UBERON:0003528,1.11e-28,29;UBERON:0002791,1.11e-28,29;UBERON:0001893,1.11e-28,29;UBERON:0003056,2.90e-28,49;UBERON:0001016,5.21e-28,75;UBERON:0002780,8.33e-28,39;UBERON:0001890,8.33e-28,39;UBERON:0006240,8.33e-28,39;UBERON:0002020,1.40e-26,34;UBERON:0010371,1.43e-24,73;UBERON:0004121,2.59e-24,95;UBERON:0000924,2.59e-24,95;UBERON:0006601,2.59e-24,95;UBERON:0002619,1.89e-23,17;UBERON:0000956,1.15e-21,21;UBERON:0001869,1.15e-21,21;UBERON:0000203,1.15e-21,21;UBERON:0010314,2.55e-18,92;UBERON:0000025,2.49e-11,114;UBERON:0002950,1.14e-10,4;UBERON:0001891,1.14e-10,4;UBERON:0009616,1.14e-10,4;UBERON:0010286,1.14e-10,4;UBERON:0004111,3.17e-10,122;UBERON:0004684,1.17e-08,3;UBERON:0002275,1.17e-08,3;UBERON:0002038,3.09e-08,3;UBERON:0009663,3.09e-08,3;UBERON:0009661,3.09e-08,3;UBERON:0000125,3.09e-08,3;UBERON:0002308,3.09e-08,3;UBERON:0002420,4.85e-08,8;UBERON:0007245,4.85e-08,8;UBERON:0010009,4.85e-08,8;UBERON:0010011,4.85e-08,8;UBERON:0000454,4.85e-08,8;UBERON:0011216,3.85e-07,194;UBERON:0000483,6.04e-07,174;UBERON:0000119,8.45e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.675029691658453,0.210324961351382,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,2.042997409363,4.45458946443106,0.263772575460388,0.365950574409639,0,1.3959149950069,1.12552522006336,1.37518422999129,1.17851434189467,0.711858403995515,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0.60289056221049,0.117588707135705,0.376999773989026,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.63502717310392,1.25668024088073,0,0,0,0,2.24685959107234,5.03250663100489,1.25654352112864,2.08589184230732,3.06858548796397,1.24672826735736,1.62241263067758,0.509196819251581,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,1.08858398642125,1.7935920839879,0.937017245597288,0.776110112217047,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,3.15434922846191,2.46971069710283,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0.637819074629948,0,0.172684981865896,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.428674070063185,0,1.07021290561242,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0,0.388902376688095,0.258319646955462,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,14.6835479080437,8.28585425712918,12.0308057822273,6.70227411140382,3.42541259885321,6.7985450765073,6.07520250208625,5.40385443869065,8.15656336171568,10.3552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0,0,0,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p@chr13:54484003..54484014,+ | |||
}} |
Revision as of 00:47, 13 September 2013
Short description: | p@chr13:54484003..54484014, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54484003..54484014, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.17e-08 | 3 |
neuron of the substantia nigra | 3.09e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.