FFCP PHASE1:Hg19::chr10:108687297..108687305,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:108687297..108687305,-|id=chr10:108687297..108687305,-|ontology_enrichment_celltype=CL:0002619!2.94e-07!3|ontology_enrichment_celltype_v019=CL:0000214;4.68e-08;3!CL:0002619;6.56e-08;3|ontology_enrichment_celltype_v019_2=CL:0000214,4.52e-08,3;CL:0002619,5.18e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.01e-56!57;UBERON:0005068!1.01e-56!57;UBERON:0006241!1.01e-56!57;UBERON:0007135!1.01e-56!57;UBERON:0002616!1.92e-50!59;UBERON:0001017!6.27e-50!82;UBERON:0001893!7.57e-49!34;UBERON:0000955!1.08e-48!69;UBERON:0006238!1.08e-48!69;UBERON:0002780!1.29e-48!41;UBERON:0001890!1.29e-48!41;UBERON:0006240!1.29e-48!41;UBERON:0003080!2.31e-47!42;UBERON:0005743!2.46e-47!86;UBERON:0002791!3.07e-45!33;UBERON:0000073!3.92e-45!94;UBERON:0001016!3.92e-45!94;UBERON:0002020!2.08e-43!34;UBERON:0003528!2.08e-43!34;UBERON:0001869!1.18e-41!32;UBERON:0003075!1.84e-38!86;UBERON:0007284!1.84e-38!86;UBERON:0002619!6.26e-37!22;UBERON:0002346!1.77e-36!90;UBERON:0001950!3.88e-35!20;UBERON:0000956!2.66e-32!25;UBERON:0000203!2.66e-32!25;UBERON:0003056!3.08e-31!61;UBERON:0007023!2.32e-29!115;UBERON:0000033!8.76e-25!123;UBERON:0000153!2.41e-23!129;UBERON:0007811!2.41e-23!129;UBERON:0004121!2.80e-22!169;UBERON:0000924!1.32e-21!173;UBERON:0006601!1.32e-21!173;UBERON:0002021!2.39e-15!5;UBERON:0002298!2.58e-14!8;UBERON:0002420!2.14e-12!9;UBERON:0007245!2.14e-12!9;UBERON:0010009!2.14e-12!9;UBERON:0010011!2.14e-12!9;UBERON:0000454!2.14e-12!9;UBERON:0002308!2.25e-12!9;UBERON:0000125!2.25e-12!9;UBERON:0000025!2.36e-12!194;UBERON:0003076!1.11e-10!15;UBERON:0003057!1.11e-10!15;UBERON:0009663!1.21e-10!7;UBERON:0004733!1.68e-09!12;UBERON:0002028!1.68e-09!12;UBERON:0007277!1.68e-09!12;UBERON:0001871!1.69e-09!7;UBERON:0000064!3.17e-09!219;UBERON:0001872!4.09e-09!5;UBERON:0004732!9.50e-09!13;UBERON:0004111!9.52e-09!241;UBERON:0000349!1.06e-08!5;UBERON:0000483!2.76e-08!309;UBERON:0000119!3.85e-08!312;UBERON:0000477!6.62e-08!286;UBERON:0000200!1.03e-07!6;UBERON:0000988!4.01e-07!3;UBERON:0001896!4.39e-07!3;UBERON:0005290!4.39e-07!3;UBERON:0010096!4.39e-07!3;UBERON:0006331!6.93e-07!3|ontology_enrichment_uberon_v019=UBERON:0002336;1.69e-21;1!UBERON:0011215;1.69e-21;1!UBERON:0001018;1.69e-21;1!UBERON:0002473;1.69e-21;1!UBERON:0005340;1.69e-21;1!UBERON:0003544;1.69e-21;1!UBERON:0005970;1.69e-21;1!UBERON:0002316;1.69e-21;1!UBERON:0001020;1.69e-21;1!UBERON:0002437;1.69e-21;1!UBERON:0002581;4.66e-21;1!UBERON:0002022;4.66e-21;1!UBERON:0001950;1.99e-15;20!UBERON:0002298;3.71e-14;6!UBERON:0002619;4.00e-14;22!UBERON:0001893;8.28e-13;34!UBERON:0000956;1.53e-12;25!UBERON:0000203;1.53e-12;25!UBERON:0000073;2.55e-12;53!UBERON:0002616;2.55e-12;53!UBERON:0005162;1.92e-11;2!UBERON:0000122;1.92e-11;2!UBERON:0002780;8.62e-11;41!UBERON:0001890;8.62e-11;41!UBERON:0001869;1.31e-09;32!UBERON:0002791;7.27e-09;32!UBERON:0006915;4.68e-08;3!UBERON:0007616;4.68e-08;3!UBERON:0002217;4.68e-08;3!UBERON:0002018;4.68e-08;3!UBERON:0000988;6.56e-08;3!UBERON:0001896;6.56e-08;3!UBERON:0005290;6.56e-08;3!UBERON:0004733;1.52e-07;12!UBERON:0002028;1.52e-07;12!UBERON:0003528;3.01e-07;34!UBERON:0002020;3.01e-07;34!UBERON:0004732;4.95e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.88e-21,1;UBERON:0011215,1.88e-21,1;UBERON:0001018,1.88e-21,1;UBERON:0002473,1.88e-21,1;UBERON:0005340,1.88e-21,1;UBERON:0003544,1.88e-21,1;UBERON:0005970,1.88e-21,1;UBERON:0002316,1.88e-21,1;UBERON:0001020,1.88e-21,1;UBERON:0002437,1.88e-21,1;UBERON:0002581,5.16e-21,1;UBERON:0002022,7.72e-21,1;UBERON:0000073,1.08e-17,53;UBERON:0002616,1.08e-17,53;UBERON:0001049,9.35e-17,56;UBERON:0005068,9.35e-17,56;UBERON:0006241,9.35e-17,56;UBERON:0007135,9.35e-17,56;UBERON:0001950,2.68e-15,20;UBERON:0001017,6.74e-15,81;UBERON:0002298,2.85e-14,6;UBERON:0001893,3.31e-14,34;UBERON:0002619,5.27e-14,22;UBERON:0000955,1.31e-13,68;UBERON:0006238,1.31e-13,68;UBERON:0001016,2.08e-13,89;UBERON:0000956,1.95e-12,25;UBERON:0000203,1.95e-12,25;UBERON:0002780,7.27e-12,41;UBERON:0001890,7.27e-12,41;UBERON:0003080,7.27e-12,41;UBERON:0006240,7.27e-12,41;UBERON:0003075,1.92e-11,82;UBERON:0007284,1.92e-11,82;UBERON:0005162,2.02e-11,2;UBERON:0000122,2.02e-11,2;UBERON:0002346,6.63e-11,86;UBERON:0002791,7.09e-10,32;UBERON:0001869,7.09e-10,32;UBERON:0003528,2.49e-09,34;UBERON:0002020,2.49e-09,34;UBERON:0010371,5.49e-09,104;UBERON:0007023,2.98e-08,114;UBERON:0006915,4.52e-08,3;UBERON:0007616,4.52e-08,3;UBERON:0002217,4.52e-08,3;UBERON:0002018,4.52e-08,3;UBERON:0003056,4.55e-08,61;UBERON:0000988,5.54e-08,3;UBERON:0001896,5.93e-08,3;UBERON:0005290,5.93e-08,3;UBERON:0010096,5.93e-08,3;UBERON:0004733,1.33e-07,12;UBERON:0002028,1.33e-07,12;UBERON:0007277,1.33e-07,12;UBERON:0004732,4.39e-07,13;UBERON:0010314,5.03e-07,132;UBERON:0004121,6.92e-07,171;UBERON:0000924,6.92e-07,171;UBERON:0006601,6.92e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6194683300949,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02203398942031,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.478901577171454,1.02558182120378,0.504143392443436,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0,0,0.380494861163441,0.546974809018219,0,0,0,0,0,0,0,0,0.177404740325278,0,0,1.56330385846713,1.31545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.430018749454354,2.20880187070458,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:108687297..108687305,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:108687297..108687305,- | |||
|id=chr10:108687297..108687305,- | |||
|ontology_enrichment_celltype=CL:0002619!2.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000214;4.68e-08;3!CL:0002619;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.52e-08,3;CL:0002619,5.18e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr10:108687297..108687305,- | |||
}} |
Revision as of 11:38, 10 September 2013
Short description: | p@chr10:108687297..108687305, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:108687297..108687305, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.52e-08 | 3 |
adult endothelial progenitor cell | 5.18e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.