FFCP PHASE1:Hg19::chr19:6772686..6772697,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7409|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12657|TSSclassifier=S|UniProt=P15498|association_with_transcript=-24bp_to_ENST00000304076,NM_005428,uc002mfu.1,uc010dva.1,uc010xjh.1_5end|coexpression_cluster_id=C3184|description=CAGE_peak_2_at_VAV1_5end|id=chr19:6772686..6772697,+|ontology_enrichment_celltype=CL:0000037!2.65e-86!172;CL:0000566!2.65e-86!172;CL:0000988!3.83e-83!182;CL:0002032!9.82e-81!165;CL:0000837!9.82e-81!165;CL:0000738!6.30e-70!140;CL:0002087!8.07e-57!119;CL:0002031!6.05e-56!124;CL:0000763!3.25e-45!112;CL:0000049!3.25e-45!112;CL:0000766!3.84e-32!76;CL:0000542!8.74e-31!53;CL:0000051!8.74e-31!53;CL:0000838!2.37e-30!52;CL:0000557!1.74e-26!71;CL:0000839!1.41e-24!70;CL:0002194!3.99e-23!63;CL:0000576!3.99e-23!63;CL:0000040!3.99e-23!63;CL:0000559!3.99e-23!63;CL:0002009!4.36e-23!65;CL:0002057!2.23e-18!42;CL:0000084!1.33e-16!25;CL:0000827!1.33e-16!25;CL:0000860!2.71e-16!45;CL:0000134!3.53e-16!358;CL:0002320!4.65e-15!365;CL:0000219!3.58e-13!390;CL:0000945!9.31e-13!24;CL:0000826!9.31e-13!24;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0000094!4.37e-08!8;CL:0000034!8.80e-08!444;CL:0000048!2.37e-07!430;CL:0000723!4.17e-07!436|ontology_enrichment_celltype_v019=CL:0000084;1.57e-19;25!CL:0000542;2.55e-18;53!CL:0000945;7.06e-13;24!CL:0000791;1.20e-11;18!CL:0000789;1.20e-11;18!CL:0002419;1.20e-11;18!CL:0000988;1.40e-11;177!CL:0000625;2.06e-11;11!CL:0000235;2.58e-10;6!CL:0000738;9.46e-10;136!CL:0000094;8.91e-09;8!CL:0000473;1.21e-08;39!CL:0000234;1.21e-08;39!CL:0000763;2.01e-08;100!CL:0002087;9.12e-08;104!CL:0000097;5.95e-07;5!CL:0000775;6.32e-07;3!CL:0000766;8.04e-07;69|ontology_enrichment_celltype_v019_2=CL:0000037,6.10e-56,168;CL:0000988,4.15e-55,177;CL:0002032,4.72e-54,161;CL:0000837,4.72e-54,161;CL:0000738,2.50e-44,136;CL:0002031,2.17e-36,120;CL:0000838,1.24e-32,52;CL:0002087,5.92e-32,115;CL:0000542,8.27e-32,53;CL:0000051,8.27e-32,53;CL:0000763,1.05e-22,108;CL:0000049,1.05e-22,108;CL:0000084,3.26e-19,25;CL:0000827,3.26e-19,25;CL:0000134,1.21e-14,354;CL:0002320,6.06e-14,361;CL:0000766,1.00e-13,72;CL:0000945,5.34e-13,24;CL:0000826,5.34e-13,24;CL:0000219,1.65e-11,386;CL:0000791,1.87e-11,18;CL:0000789,1.87e-11,18;CL:0002420,1.87e-11,18;CL:0002419,1.87e-11,18;CL:0000790,1.87e-11,18;CL:0000625,2.85e-11,11;CL:0000235,4.72e-10,6;CL:0000557,4.82e-10,67;CL:0000094,1.03e-08,8;CL:0000048,1.31e-08,427;CL:0000034,1.41e-08,441;CL:0000839,1.54e-08,66;CL:0000723,3.22e-08,433;CL:0000473,7.13e-08,48;CL:0000234,7.13e-08,48;CL:0000775,4.73e-07,3;CL:0000097,6.94e-07,5;CL:0002028,6.94e-07,5|ontology_enrichment_development_v019=CL:0000051;2.55e-18;53!CL:0000790;1.20e-11;18|ontology_enrichment_disease=DOID:2531!8.49e-26!51;DOID:0060083!8.49e-26!51;DOID:1240!2.49e-21!39;DOID:8692!3.75e-15!31;DOID:0060058!2.76e-08!10|ontology_enrichment_disease_v019=DOID:1240;1.49e-13;39!DOID:2531;1.37e-10;51!DOID:0060083;1.37e-10;51!DOID:8692;7.56e-10;31|ontology_enrichment_disease_v019_2=DOID:2531,2.65e-18,51;DOID:0060083,2.65e-18,51;DOID:1240,9.94e-17,39;DOID:8692,1.33e-10,31|ontology_enrichment_uberon=UBERON:0002390!1.17e-36!102;UBERON:0003061!1.17e-36!102;UBERON:0002193!7.38e-32!112;UBERON:0002371!3.61e-23!80;UBERON:0001474!3.99e-20!86;UBERON:0002405!2.25e-16!115;UBERON:0002384!2.32e-14!375;UBERON:0004765!2.85e-14!101;UBERON:0001434!2.85e-14!101;UBERON:0000178!6.66e-10!15;UBERON:0000179!6.66e-10!15;UBERON:0000463!6.66e-10!15|ontology_enrichment_uberon_v019=UBERON:0000178;8.43e-10;15!UBERON:0000179;8.43e-10;15!UBERON:0000463;8.43e-10;15!UBERON:0002390;6.15e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.98e-17,98;UBERON:0003061,6.98e-17,98;UBERON:0002193,2.56e-14,108;UBERON:0002384,5.37e-13,371;UBERON:0000178,8.16e-10,15;UBERON:0000179,8.16e-10,15;UBERON:0000463,8.16e-10,15;UBERON:0002405,1.86e-08,93;UBERON:0002371,4.15e-08,76;UBERON:0001474,4.49e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,2.46301768349837,2.75487734597877,1.18009283054671,0.767658796194425,0.619264493264304,0,0,0,1.93668001450754,0.426507697462265,0.880801318004542,0,1.60435557976113,0.434021741431704,0.671746422719773,0.647787332037959,0.77272670290256,0.726991193897824,0.377875943688809,1.94067248950253,1.62700325833979,0.822335776043652,1.23882548358041,0.575384784644301,0.256160706529101,0.945928919554341,1.03423704220986,0.645484683583826,0,0.941211697713023,0.272906150057846,1.57306439111559,0.612167784741805,0.320929027076094,1.27867425159808,0.989553900560148,1.19678194572979,1.70489900213078,2.03146467040009,0.56738522469114,3.11411124497787,1.00499466102697,0,0.434377689410233,0.605399502633369,0.736555271975129,2.21523671208619,0.422510572623884,0.850417199860174,0.419317291016752,0.673971786878971,0.600707571366025,0.48217676009124,0.570025487482497,0,0.730656615058536,0,0.546138611262131,1.77901850772711,2.13365111283254,0.800791974072025,0,0,1.90810750907073,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7409 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12657 | |||
|TSSclassifier=S | |||
|UniProt=P15498 | |||
|association_with_transcript=-24bp_to_ENST00000304076,NM_005428,uc002mfu.1,uc010dva.1,uc010xjh.1_5end | |||
|coexpression_cluster_id=C3184 | |||
|description=CAGE_peak_2_at_VAV1_5end | |||
|id=chr19:6772686..6772697,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.65e-86!172;CL:0000566!2.65e-86!172;CL:0000988!3.83e-83!182;CL:0002032!9.82e-81!165;CL:0000837!9.82e-81!165;CL:0000738!6.30e-70!140;CL:0002087!8.07e-57!119;CL:0002031!6.05e-56!124;CL:0000763!3.25e-45!112;CL:0000049!3.25e-45!112;CL:0000766!3.84e-32!76;CL:0000542!8.74e-31!53;CL:0000051!8.74e-31!53;CL:0000838!2.37e-30!52;CL:0000557!1.74e-26!71;CL:0000839!1.41e-24!70;CL:0002194!3.99e-23!63;CL:0000576!3.99e-23!63;CL:0000040!3.99e-23!63;CL:0000559!3.99e-23!63;CL:0002009!4.36e-23!65;CL:0002057!2.23e-18!42;CL:0000084!1.33e-16!25;CL:0000827!1.33e-16!25;CL:0000860!2.71e-16!45;CL:0000134!3.53e-16!358;CL:0002320!4.65e-15!365;CL:0000219!3.58e-13!390;CL:0000945!9.31e-13!24;CL:0000826!9.31e-13!24;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0000094!4.37e-08!8;CL:0000034!8.80e-08!444;CL:0000048!2.37e-07!430;CL:0000723!4.17e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.57e-19;25!CL:0000542;2.55e-18;53!CL:0000945;7.06e-13;24!CL:0000791;1.20e-11;18!CL:0000789;1.20e-11;18!CL:0002419;1.20e-11;18!CL:0000988;1.40e-11;177!CL:0000625;2.06e-11;11!CL:0000235;2.58e-10;6!CL:0000738;9.46e-10;136!CL:0000094;8.91e-09;8!CL:0000473;1.21e-08;39!CL:0000234;1.21e-08;39!CL:0000763;2.01e-08;100!CL:0002087;9.12e-08;104!CL:0000097;5.95e-07;5!CL:0000775;6.32e-07;3!CL:0000766;8.04e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.10e-56,168;CL:0000988,4.15e-55,177;CL:0002032,4.72e-54,161;CL:0000837,4.72e-54,161;CL:0000738,2.50e-44,136;CL:0002031,2.17e-36,120;CL:0000838,1.24e-32,52;CL:0002087,5.92e-32,115;CL:0000542,8.27e-32,53;CL:0000051,8.27e-32,53;CL:0000763,1.05e-22,108;CL:0000049,1.05e-22,108;CL:0000084,3.26e-19,25;CL:0000827,3.26e-19,25;CL:0000134,1.21e-14,354;CL:0002320,6.06e-14,361;CL:0000766,1.00e-13,72;CL:0000945,5.34e-13,24;CL:0000826,5.34e-13,24;CL:0000219,1.65e-11,386;CL:0000791,1.87e-11,18;CL:0000789,1.87e-11,18;CL:0002420,1.87e-11,18;CL:0002419,1.87e-11,18;CL:0000790,1.87e-11,18;CL:0000625,2.85e-11,11;CL:0000235,4.72e-10,6;CL:0000557,4.82e-10,67;CL:0000094,1.03e-08,8;CL:0000048,1.31e-08,427;CL:0000034,1.41e-08,441;CL:0000839,1.54e-08,66;CL:0000723,3.22e-08,433;CL:0000473,7.13e-08,48;CL:0000234,7.13e-08,48;CL:0000775,4.73e-07,3;CL:0000097,6.94e-07,5;CL:0002028,6.94e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;2.55e-18;53!CL:0000790;1.20e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!8.49e-26!51;DOID:0060083!8.49e-26!51;DOID:1240!2.49e-21!39;DOID:8692!3.75e-15!31;DOID:0060058!2.76e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.49e-13;39!DOID:2531;1.37e-10;51!DOID:0060083;1.37e-10;51!DOID:8692;7.56e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.65e-18,51;DOID:0060083,2.65e-18,51;DOID:1240,9.94e-17,39;DOID:8692,1.33e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-36!102;UBERON:0003061!1.17e-36!102;UBERON:0002193!7.38e-32!112;UBERON:0002371!3.61e-23!80;UBERON:0001474!3.99e-20!86;UBERON:0002405!2.25e-16!115;UBERON:0002384!2.32e-14!375;UBERON:0004765!2.85e-14!101;UBERON:0001434!2.85e-14!101;UBERON:0000178!6.66e-10!15;UBERON:0000179!6.66e-10!15;UBERON:0000463!6.66e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.43e-10;15!UBERON:0000179;8.43e-10;15!UBERON:0000463;8.43e-10;15!UBERON:0002390;6.15e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.98e-17,98;UBERON:0003061,6.98e-17,98;UBERON:0002193,2.56e-14,108;UBERON:0002384,5.37e-13,371;UBERON:0000178,8.16e-10,15;UBERON:0000179,8.16e-10,15;UBERON:0000463,8.16e-10,15;UBERON:0002405,1.86e-08,93;UBERON:0002371,4.15e-08,76;UBERON:0001474,4.49e-07,82 | |||
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| |||
|short_description=p2@VAV1 | |||
}} |
Revision as of 22:51, 11 September 2013
Short description: | p2@VAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_VAV1_5end |
Coexpression cluster: | C3184_Eosinophils_CD8_CD4_Neutrophils_hairy_Whole_B |
Association with transcript: | -24bp_to_ENST00000304076, NM_005428, uc002mfu.1, uc010dva.1, uc010xjh.1_5end |
EntrezGene: | VAV1 |
HGNC: | 12657 |
UniProt: | P15498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.98e-17 | 98 |
blood island | 6.98e-17 | 98 |
hemolymphoid system | 2.56e-14 | 108 |
connective tissue | 5.37e-13 | 371 |
blood | 8.16e-10 | 15 |
haemolymphatic fluid | 8.16e-10 | 15 |
organism substance | 8.16e-10 | 15 |
immune system | 1.86e-08 | 93 |
bone marrow | 4.15e-08 | 76 |
bone element | 4.49e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.65e-18 | 51 |
immune system cancer | 2.65e-18 | 51 |
leukemia | 9.94e-17 | 39 |
myeloid leukemia | 1.33e-10 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.