FFCP PHASE1:Hg19::chr2:26915584..26915634,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6278|TSSclassifier=S|UniProt=O14649|association_with_transcript=0bp_to_ENST00000302909_5end|description=CAGE_peak_1_at_KCNK3_5end|id=chr2:26915584..26915634,+|ontology_enrichment_celltype=CL:1000507!1.27e-07!12;CL:1000494!1.27e-07!12|ontology_enrichment_celltype_v019=CL:1000507;2.47e-12;10!CL:1000494;2.47e-12;10!CL:1000497;1.06e-09;17!CL:0002518;1.06e-09;17!CL:1000449;2.16e-07;15|ontology_enrichment_celltype_v019_2=CL:1000507,3.12e-12,10;CL:1000494,3.12e-12,10;CL:1000497,1.25e-09,17;CL:0002518,1.25e-09,17;CL:1000449,2.48e-07,15|ontology_enrichment_development_v019=UBERON:0006601;6.78e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.60e-43!115;UBERON:0001049!1.82e-23!57;UBERON:0005068!1.82e-23!57;UBERON:0006241!1.82e-23!57;UBERON:0007135!1.82e-23!57;UBERON:0000073!5.86e-23!94;UBERON:0001016!5.86e-23!94;UBERON:0005743!1.78e-22!86;UBERON:0001017!7.19e-21!82;UBERON:0003075!8.66e-21!86;UBERON:0007284!8.66e-21!86;UBERON:0002616!2.96e-19!59;UBERON:0002346!7.16e-19!90;UBERON:0003080!1.39e-18!42;UBERON:0000955!1.44e-18!69;UBERON:0006238!1.44e-18!69;UBERON:0002780!9.13e-18!41;UBERON:0001890!9.13e-18!41;UBERON:0006240!9.13e-18!41;UBERON:0003056!8.19e-15!61;UBERON:0002020!2.93e-13!34;UBERON:0003528!2.93e-13!34;UBERON:0001893!3.30e-13!34;UBERON:0002619!7.38e-13!22;UBERON:0001869!1.44e-12!32;UBERON:0002791!1.51e-12!33;UBERON:0001950!4.62e-12!20;UBERON:0004121!6.44e-12!169;UBERON:0000025!8.93e-12!194;UBERON:0000924!4.48e-11!173;UBERON:0006601!4.48e-11!173;UBERON:0000956!1.88e-10!25;UBERON:0000203!1.88e-10!25;UBERON:0000062!2.46e-10!511;UBERON:0000153!3.93e-10!129;UBERON:0007811!3.93e-10!129;UBERON:0000033!4.45e-10!123;UBERON:0000481!7.26e-10!347;UBERON:0000489!7.40e-10!32;UBERON:0003103!2.30e-09!69;UBERON:0004111!3.92e-09!241;UBERON:0000064!6.49e-09!219;UBERON:0000477!1.24e-08!286;UBERON:0000922!1.59e-08!612;UBERON:0002113!2.56e-08!27;UBERON:0003918!2.56e-08!27;UBERON:0005095!2.56e-08!27;UBERON:0007687!2.56e-08!27;UBERON:0000468!8.49e-08!659;UBERON:0009773!1.27e-07!12;UBERON:0001231!1.27e-07!12;UBERON:0004810!1.27e-07!12;UBERON:0000483!1.54e-07!309;UBERON:0000475!1.98e-07!365;UBERON:0002050!2.03e-07!605;UBERON:0005423!2.03e-07!605;UBERON:0000119!3.44e-07!312;UBERON:0000923!4.31e-07!604;UBERON:0005291!4.31e-07!604;UBERON:0006598!4.31e-07!604;UBERON:0002532!4.31e-07!604;UBERON:0000467!6.50e-07!625;UBERON:0000480!8.12e-07!626|ontology_enrichment_uberon_v019=UBERON:0001950;6.58e-15;20!UBERON:0002619;1.02e-14;22!UBERON:0007023;5.42e-13;114!UBERON:0000956;2.10e-12;25!UBERON:0000203;2.10e-12;25!UBERON:0000073;2.14e-12;53!UBERON:0002616;2.14e-12;53!UBERON:0004211;2.47e-12;10!UBERON:0009773;2.47e-12;10!UBERON:0001231;2.47e-12;10!UBERON:0004810;2.47e-12;10!UBERON:0002780;6.75e-12;41!UBERON:0001890;6.75e-12;41!UBERON:0001869;1.52e-10;32!UBERON:0001893;3.15e-10;34!UBERON:0003528;5.00e-10;34!UBERON:0002020;5.00e-10;34!UBERON:0000489;9.29e-10;29!UBERON:0002113;1.67e-09;24!UBERON:0011143;1.67e-09;24!UBERON:0002791;2.92e-09;32!UBERON:0000955;1.58e-08;68!UBERON:0006554;6.31e-08;30!UBERON:0001008;6.31e-08;30!UBERON:0001017;7.34e-08;75!UBERON:0002298;1.13e-07;6!UBERON:0001894;1.69e-07;7!UBERON:0006555;2.16e-07;15!UBERON:0004819;2.16e-07;15!UBERON:0001285;2.16e-07;15!UBERON:0007684;2.16e-07;15!UBERON:0001016;3.22e-07;83!UBERON:0003296;3.30e-07;4!UBERON:0010133;3.30e-07;4!UBERON:0004732;3.90e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.48e-42,114;UBERON:0000073,2.01e-21,53;UBERON:0002616,2.01e-21,53;UBERON:0001049,2.56e-21,56;UBERON:0005068,2.56e-21,56;UBERON:0006241,2.56e-21,56;UBERON:0007135,2.56e-21,56;UBERON:0001016,2.61e-20,89;UBERON:0001017,3.24e-20,81;UBERON:0000955,1.21e-18,68;UBERON:0006238,1.21e-18,68;UBERON:0003075,4.76e-18,82;UBERON:0007284,4.76e-18,82;UBERON:0002346,1.28e-16,86;UBERON:0002780,1.42e-16,41;UBERON:0001890,1.42e-16,41;UBERON:0003080,1.42e-16,41;UBERON:0006240,1.42e-16,41;UBERON:0010371,4.42e-15,104;UBERON:0001950,6.62e-15,20;UBERON:0010314,9.51e-15,132;UBERON:0002619,1.14e-14,22;UBERON:0000956,2.32e-12,25;UBERON:0000203,2.32e-12,25;UBERON:0004810,3.12e-12,10;UBERON:0003056,1.23e-11,61;UBERON:0000025,1.26e-11,192;UBERON:0000489,1.30e-11,31;UBERON:0003528,1.63e-11,34;UBERON:0002020,1.63e-11,34;UBERON:0001893,1.86e-11,34;UBERON:0002113,1.99e-11,26;UBERON:0003918,1.99e-11,26;UBERON:0011143,1.99e-11,26;UBERON:0005095,1.99e-11,26;UBERON:0007687,1.99e-11,26;UBERON:0011216,2.08e-11,223;UBERON:0001869,2.72e-11,32;UBERON:0004121,4.76e-10,171;UBERON:0000924,4.76e-10,171;UBERON:0006601,4.76e-10,171;UBERON:0002791,5.96e-10,32;UBERON:0004111,1.51e-09,240;UBERON:0003103,2.02e-08,68;UBERON:0006555,2.18e-08,16;UBERON:0004819,2.18e-08,16;UBERON:0005423,8.13e-08,581;UBERON:0002298,1.08e-07,6;UBERON:0000922,1.57e-07,592;UBERON:0001008,1.69e-07,48;UBERON:0001894,1.89e-07,7;UBERON:0006222,1.89e-07,7;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6278 | |||
|TSSclassifier=S | |||
|UniProt=O14649 | |||
|association_with_transcript=0bp_to_ENST00000302909_5end | |||
|description=CAGE_peak_1_at_KCNK3_5end | |||
|id=chr2:26915584..26915634,+ | |||
|ontology_enrichment_celltype=CL:1000507!1.27e-07!12;CL:1000494!1.27e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.47e-12;10!CL:1000494;2.47e-12;10!CL:1000497;1.06e-09;17!CL:0002518;1.06e-09;17!CL:1000449;2.16e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.12e-12,10;CL:1000494,3.12e-12,10;CL:1000497,1.25e-09,17;CL:0002518,1.25e-09,17;CL:1000449,2.48e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.78e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@KCNK3 | |||
}} |
Revision as of 18:03, 12 September 2013
Short description: | p1@KCNK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KCNK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302909_5end |
EntrezGene: | KCNK3 |
HGNC: | 6278 |
UniProt: | O14649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.12e-12 | 10 |
nephron tubule epithelial cell | 3.12e-12 | 10 |
kidney cell | 1.25e-09 | 17 |
kidney epithelial cell | 1.25e-09 | 17 |
epithelial cell of nephron | 2.48e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.