FFCP PHASE1:Hg19::chr11:112034780..112034795,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |||
|TSSclassifier=strong | |||
|UniProt=Q6WWJ7 | |||
|association_with_transcript=1bp_to_ENST00000524595_5end | |||
|coexpression_cluster_id=C2095 | |||
|description=CAGE_peak_3_at_IL18_5end | |||
|id=chr11:112034780..112034795,- | |||
|ontology_enrichment_celltype=CL:0000557!1.41e-22!71;CL:0002009!1.80e-21!65;CL:0000839!2.37e-21!70;CL:0002194!2.41e-20!63;CL:0000576!2.41e-20!63;CL:0000040!2.41e-20!63;CL:0000559!2.41e-20!63;CL:0000066!7.95e-18!254;CL:0000766!1.21e-17!76;CL:0002076!6.29e-16!43;CL:0000860!1.62e-15!45;CL:0002057!8.14e-14!42;CL:0000223!3.15e-13!59;CL:0000763!5.70e-13!112;CL:0000049!5.70e-13!112;CL:0000077!1.38e-08!19;CL:0000076!3.52e-07!62;CL:0002251!3.84e-07!21;CL:0002368!6.74e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.26e-14;39!CL:0000234;1.26e-14;39!CL:0002076;6.44e-14;42!CL:0000860;4.65e-13;33!CL:0002057;4.65e-13;33!CL:0000077;1.75e-10;19!CL:0000576;4.13e-10;48!CL:0000766;4.56e-09;69!CL:0002251;6.04e-09;20!CL:0002368;9.40e-08;13!CL:0002202;4.38e-07;9!CL:0002632;4.38e-07;9!CL:0000235;8.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.29e-24,253;CL:0000557,1.96e-22,67;CL:0002009,1.12e-20,61;CL:0000839,1.91e-20,66;CL:0002194,2.80e-19,59;CL:0000576,2.80e-19,59;CL:0000040,2.80e-19,59;CL:0000559,2.80e-19,59;CL:0002076,2.98e-19,42;CL:0000473,2.89e-18,48;CL:0000234,2.89e-18,48;CL:0000766,2.52e-17,72;CL:0000223,1.10e-14,58;CL:0000860,9.85e-14,42;CL:0002057,9.85e-14,42;CL:0000076,1.10e-10,63;CL:0000077,2.24e-10,19;CL:0000763,2.53e-09,108;CL:0000049,2.53e-09,108;CL:0002251,4.25e-09,20;CL:0002368,6.52e-08,13;CL:0002202,3.61e-07,9;CL:0002632,3.61e-07,9;CL:0000235,8.26e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-10;42!CL:0000223;1.63e-07;58!UBERON:0008947;2.77e-07;29 | |||
|ontology_enrichment_disease=DOID:305!5.58e-13!106;DOID:1749!2.57e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.87e-09;14!DOID:299;8.55e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.06e-17,106;DOID:0050687,7.02e-10,143;DOID:1749,2.59e-09,14;DOID:299,5.37e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000062!7.61e-22!511;UBERON:0002371!1.21e-18!80;UBERON:0002390!3.56e-16!102;UBERON:0003061!3.56e-16!102;UBERON:0001474!1.99e-15!86;UBERON:0002405!2.45e-15!115;UBERON:0002193!1.34e-14!112;UBERON:0004119!4.34e-13!169;UBERON:0000925!4.34e-13!169;UBERON:0006595!4.34e-13!169;UBERON:0000467!5.52e-12!625;UBERON:0000480!8.25e-12!626;UBERON:0004765!1.06e-11!101;UBERON:0001434!1.06e-11!101;UBERON:0002050!1.20e-11!605;UBERON:0005423!1.20e-11!605;UBERON:0001007!1.43e-11!155;UBERON:0001555!1.43e-11!155;UBERON:0007026!1.43e-11!155;UBERON:0000923!2.07e-11!604;UBERON:0005291!2.07e-11!604;UBERON:0006598!2.07e-11!604;UBERON:0002532!2.07e-11!604;UBERON:0004921!2.50e-11!129;UBERON:0004185!2.50e-11!129;UBERON:0000922!3.27e-11!612;UBERON:0000468!1.15e-09!659;UBERON:0000065!1.74e-09!53;UBERON:0001004!1.99e-09!72;UBERON:0001041!9.77e-09!98;UBERON:0008947!1.08e-08!38;UBERON:0003258!1.08e-08!38;UBERON:0005911!1.45e-08!82;UBERON:0000077!1.56e-08!130;UBERON:0001737!6.10e-08!9;UBERON:0000072!1.41e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.64e-10;9!UBERON:0001557;3.64e-10;9!UBERON:0000065;2.25e-08;44!UBERON:0000072;1.48e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-17,76;UBERON:0002405,1.03e-15,93;UBERON:0004119,3.66e-15,160;UBERON:0000925,3.66e-15,160;UBERON:0006595,3.66e-15,160;UBERON:0001474,4.03e-15,82;UBERON:0004765,5.56e-15,90;UBERON:0002390,3.89e-14,98;UBERON:0003061,3.89e-14,98;UBERON:0001007,1.37e-13,145;UBERON:0001555,1.37e-13,145;UBERON:0007026,1.37e-13,145;UBERON:0004921,8.13e-13,118;UBERON:0002193,8.16e-13,108;UBERON:0001004,6.25e-12,74;UBERON:0001434,8.73e-12,100;UBERON:0001041,3.42e-11,87;UBERON:0000065,8.75e-11,54;UBERON:0008947,2.71e-10,38;UBERON:0003258,2.71e-10,38;UBERON:0001737,3.76e-10,9;UBERON:0000072,2.24e-09,47;UBERON:0002050,9.31e-09,564;UBERON:0005423,1.02e-08,581;UBERON:0001557,2.44e-08,19;UBERON:0000922,1.15e-07,592;UBERON:0000923,1.37e-07,560;UBERON:0010316,1.37e-07,560;UBERON:0005291,1.37e-07,560;UBERON:0006598,1.37e-07,560;UBERON:0010317,1.37e-07,560;UBERON:0002532,1.37e-07,560;UBERON:0005911,3.97e-07,82 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0,7.86348596804828,2.09340350391728,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.619264493264304,9.19421224478927,6.92773613189975,3.32778609150109,0,0,0.880801318004542,4.9859586767869,7.62068900386538,2.60413044859022,6.26963327871788,4.85840499028469,10.5605982730016,1.16318591023652,1.51150377475524,0.727752183563449,7.90258725479328,9.04569353648017,25.3959224133985,1.1507695692886,2.81776777182011,2.60130452877444,83.4284547382617,43.8929584837002,41.9822108442459,4.70605848856512,6.27684145133045,11.6856211911444,62.747197936035,50.0649282238706,65.8517239573012,0,0.199463657621632,0.426224750532694,78.0662851910891,33.4757282567772,71.6245586344911,1.00499466102697,2.08593167368081,1.52032191293582,54.4859552370032,67.0265297497368,113.609997091278,0.633765858935825,1.4882300997553,1.25795187305026,0,0.600707571366025,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.527008714158756,0.654895377488563,2.5500670180478,3.70784442784429,0.97364218096405,1.0447784237956,2.52620124985844,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.454072282934794,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0,0,0.302256294682921,0.508681776931463,21.2586938479627,13.9100521501326,24.6651952034543,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,18.1009404060961,18.207146528435,19.0398713607951,24.0440860556619,20.6985471887786,20.1680026244432,17.9325639853019,18.4448177217825,18.8526106903731,0,0,1.6462960453256,0,0,0.982827216677626,1.18157981336281,0,17.341369834579,0,6.47526683910891,11.240175325762,6.03173834469785,2.87024179991442,0,0,0,0.231860809950154,0.939269553886573,0,0,0.190254152234598,0,0,10.8335482678455,19.4223540065567,17.5384771500699,14.0600750980165,9.07103492273841,6.37987937590739,6.53777215730793,0.290633938513962,0,88.1867195833739,3.25779205848936,1.4512968087854,1.72943944100354,1.00993946741104,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,7.53598442648965,13.9445353376047,24.0934908748757,10.9461402577071,11.5519131029389,12.6500363689819,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.862856803274467,2.02782359826544,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,1.48418066444991,0,0,0,0,0,6.64726972753922,8.62177822304125,1.01289087829486,0.803701137152247,0,0.524497659837696,0.451199612907412,0.847168708148562,0,2.92278449306521,1.26661954671451,0,0,0.863663664408557,3.08454505380579,1.08378575017541,0,1.01950509218015,0,0,0,0.261435451024901,1.28225062558195,23.2890398446791,1.95227036798582,2.67906630284078,0,0,8.03971753194641,16.251506150913,0,0,0,0,0,0,0,0,0,5.61968712227326,2.88285101047659,3.82838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0,0.949138274156178,0.762520775695299,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0.709522128141196,0,0,0,0,7.9864353562175,6.03272047982209,6.53345909167936,3.20088922641049,6.02707521739722,1.68471475667626,5.76459199597678,9.87810620889926,0,0.764637207142375,1.70894156152249,0.238231775457789,0,0.648473311192717,1.62009431171434,0,0,0,9.3115282072792,0,0,0,0,0.399158742865633,0.191505370132367,1.90506224451495,0,0.842391534340376,0.456469358066384,0,2.50634477090067,0,0,0,0.425846237690326,0.687010689511529,1.53620382154229,0.447352215784832,1.16794399198336,0.976940477010201,0.556812347790485,0,2.16364542780786,0,0,3.36852972734796,1.46508179271894,0,0,1.42068073403207,0.95497793895076,0,1.22864280839693,0,1.54736358051564,1.00177834520615,0,1.68900326502395,0.996239941255349,8.01223355040328,0,0.409074730008619,0,0,22.6468244891264,13.7846304500219,0,0.197286811273867,0,0,0,0.371072392647405,1.99613798001194,0,0.0874599999961957,1.44999915086959,5.46208551770398,2.79679015322043,1.65471377237555,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0.438770794307945,0,17.8462392676612,5.00176680274681,1.70913083770502,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0.635746315921515,4.43095935508857,4.24405301213784,2.82706142867882,0,1.99052386215701,1.14994833854341,0,0,0,0,0.876214728748802,0,0.234264445725339,0,5.6742739490306,0,0.394584402849391,3.62972148145992,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| |||
|short_description=p3@IL18 | |||
}} |
Revision as of 10:21, 11 January 2014
Short description: | p3@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL18_5end |
Coexpression cluster: | C2095_Mast_Retinal_CD14_bile_lung_cervical_Gingival |
Association with transcript: | 1bp_to_ENST00000524595_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | Q6WWJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.29e-24 | 253 |
granulocyte monocyte progenitor cell | 1.96e-22 | 67 |
macrophage dendritic cell progenitor | 1.12e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.91e-20 | 66 |
monopoietic cell | 2.80e-19 | 59 |
monocyte | 2.80e-19 | 59 |
monoblast | 2.80e-19 | 59 |
promonocyte | 2.80e-19 | 59 |
endo-epithelial cell | 2.98e-19 | 42 |
defensive cell | 2.89e-18 | 48 |
phagocyte | 2.89e-18 | 48 |
myeloid leukocyte | 2.52e-17 | 72 |
endodermal cell | 1.10e-14 | 58 |
classical monocyte | 9.85e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.85e-14 | 42 |
squamous epithelial cell | 1.10e-10 | 63 |
mesothelial cell | 2.24e-10 | 19 |
myeloid cell | 2.53e-09 | 108 |
common myeloid progenitor | 2.53e-09 | 108 |
epithelial cell of alimentary canal | 4.25e-09 | 20 |
respiratory epithelial cell | 6.52e-08 | 13 |
epithelial cell of tracheobronchial tree | 3.61e-07 | 9 |
epithelial cell of lower respiratory tract | 3.61e-07 | 9 |
macrophage | 8.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-17 | 76 |
immune system | 1.03e-15 | 93 |
endoderm-derived structure | 3.66e-15 | 160 |
endoderm | 3.66e-15 | 160 |
presumptive endoderm | 3.66e-15 | 160 |
bone element | 4.03e-15 | 82 |
skeletal element | 5.56e-15 | 90 |
hematopoietic system | 3.89e-14 | 98 |
blood island | 3.89e-14 | 98 |
digestive system | 1.37e-13 | 145 |
digestive tract | 1.37e-13 | 145 |
primitive gut | 1.37e-13 | 145 |
subdivision of digestive tract | 8.13e-13 | 118 |
hemolymphoid system | 8.16e-13 | 108 |
respiratory system | 6.25e-12 | 74 |
skeletal system | 8.73e-12 | 100 |
foregut | 3.42e-11 | 87 |
respiratory tract | 8.75e-11 | 54 |
respiratory primordium | 2.71e-10 | 38 |
endoderm of foregut | 2.71e-10 | 38 |
larynx | 3.76e-10 | 9 |
segment of respiratory tract | 2.24e-09 | 47 |
embryonic structure | 9.31e-09 | 564 |
developing anatomical structure | 1.02e-08 | 581 |
upper respiratory tract | 2.44e-08 | 19 |
embryo | 1.15e-07 | 592 |
germ layer | 1.37e-07 | 560 |
germ layer / neural crest | 1.37e-07 | 560 |
embryonic tissue | 1.37e-07 | 560 |
presumptive structure | 1.37e-07 | 560 |
germ layer / neural crest derived structure | 1.37e-07 | 560 |
epiblast (generic) | 1.37e-07 | 560 |
endo-epithelium | 3.97e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.06e-17 | 106 |
cell type cancer | 7.02e-10 | 143 |
squamous cell carcinoma | 2.59e-09 | 14 |
adenocarcinoma | 5.37e-07 | 25 |