FFCP PHASE1:Hg19::chr12:113587558..113587572,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37100 | |||
|TSSclassifier=strong | |||
|UniProt=A6NFT4 | |||
|association_with_transcript=-90bp_to_ENST00000335621,NM_001144872,uc010sys.1_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_CCDC42B_5end | |||
|id=chr12:113587558..113587572,+ | |||
|ontology_enrichment_celltype=CL:0000453!8.06e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.05e-21;2!CL:0001016;6.05e-21;2!CL:0000453;6.07e-09;5!CL:0000840;1.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.05e-21,2;CL:0001016,7.05e-21,2;CL:0000453,6.44e-09,5;CL:0000840,1.43e-07,5;CL:0001029,1.43e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.43e-21;2!UBERON:0000358;2.82e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.61e-35!57;UBERON:0005068!6.61e-35!57;UBERON:0006241!6.61e-35!57;UBERON:0007135!6.61e-35!57;UBERON:0000955!3.18e-32!69;UBERON:0006238!3.18e-32!69;UBERON:0007023!4.58e-32!115;UBERON:0001017!4.06e-31!82;UBERON:0002616!5.11e-31!59;UBERON:0002780!7.10e-30!41;UBERON:0001890!7.10e-30!41;UBERON:0006240!7.10e-30!41;UBERON:0005743!3.45e-29!86;UBERON:0003080!5.31e-29!42;UBERON:0002020!4.75e-26!34;UBERON:0003528!4.75e-26!34;UBERON:0001893!1.41e-25!34;UBERON:0000073!1.94e-25!94;UBERON:0001016!1.94e-25!94;UBERON:0001869!1.28e-24!32;UBERON:0002791!3.61e-24!33;UBERON:0003075!1.24e-21!86;UBERON:0007284!1.24e-21!86;UBERON:0000153!1.11e-20!129;UBERON:0007811!1.11e-20!129;UBERON:0002346!2.95e-20!90;UBERON:0000033!1.75e-19!123;UBERON:0002619!5.76e-18!22;UBERON:0003056!8.02e-18!61;UBERON:0000956!1.90e-15!25;UBERON:0000203!1.90e-15!25;UBERON:0001950!1.77e-14!20;UBERON:0004121!6.15e-14!169;UBERON:0000924!2.31e-13!173;UBERON:0006601!2.31e-13!173;UBERON:0002308!4.43e-13!9;UBERON:0000125!4.43e-13!9;UBERON:0002298!6.27e-11!8;UBERON:0000369!1.08e-10!4;UBERON:0002435!1.08e-10!4;UBERON:0000204!1.08e-10!4;UBERON:0010082!1.08e-10!4;UBERON:0002420!3.34e-09!9;UBERON:0007245!3.34e-09!9;UBERON:0010009!3.34e-09!9;UBERON:0010011!3.34e-09!9;UBERON:0000454!3.34e-09!9;UBERON:0000025!3.96e-09!194;UBERON:0009663!7.99e-09!7;UBERON:0001896!9.82e-09!3;UBERON:0005290!9.82e-09!3;UBERON:0010096!9.82e-09!3;UBERON:0005383!1.90e-08!3;UBERON:0005382!1.90e-08!3;UBERON:0000349!6.49e-08!5;UBERON:0000988!7.73e-08!3;UBERON:0004111!1.37e-07!241;UBERON:0000475!1.67e-07!365;UBERON:0003076!2.73e-07!15;UBERON:0003057!2.73e-07!15;UBERON:0001872!4.70e-07!5;UBERON:0004733!5.51e-07!12;UBERON:0002028!5.51e-07!12;UBERON:0007277!5.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.22e-41;6!UBERON:0001896;7.75e-31;3!UBERON:0005290;7.75e-31;3!UBERON:0000125;1.18e-27;9!UBERON:0002308;1.18e-27;9!UBERON:0000369;3.98e-23;4!UBERON:0002435;3.98e-23;4!UBERON:0000204;3.98e-23;4!UBERON:0001873;2.43e-21;2!UBERON:0002148;6.05e-21;2!UBERON:0006331;6.05e-21;2!UBERON:0009662;6.05e-21;2!UBERON:0004733;7.65e-21;12!UBERON:0002028;7.65e-21;12!UBERON:0000341;2.35e-20;2!UBERON:0004732;3.08e-19;13!UBERON:0005383;1.46e-14;3!UBERON:0005382;1.46e-14;3!UBERON:0000988;2.68e-14;3!UBERON:0009663;1.74e-13;7!UBERON:0001301;1.52e-11;1!UBERON:0002336;2.82e-11;1!UBERON:0011215;2.82e-11;1!UBERON:0001018;2.82e-11;1!UBERON:0002473;2.82e-11;1!UBERON:0005340;2.82e-11;1!UBERON:0003544;2.82e-11;1!UBERON:0005970;2.82e-11;1!UBERON:0002316;2.82e-11;1!UBERON:0001020;2.82e-11;1!UBERON:0002437;2.82e-11;1!UBERON:0001882;4.67e-11;1!UBERON:0005403;4.67e-11;1!UBERON:0002420;1.30e-10;9!UBERON:0007245;1.30e-10;9!UBERON:0010009;1.30e-10;9!UBERON:0010011;1.30e-10;9!UBERON:0000454;1.30e-10;9!UBERON:0000073;4.24e-10;53!UBERON:0002616;4.24e-10;53!UBERON:0000974;2.11e-07;6!UBERON:0001017;7.34e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,9.47e-42,6;UBERON:0001896,6.66e-31,3;UBERON:0005290,6.66e-31,3;UBERON:0010096,6.66e-31,3;UBERON:0000125,1.15e-27,9;UBERON:0002308,1.15e-27,9;UBERON:0003076,1.47e-23,15;UBERON:0003057,1.47e-23,15;UBERON:0000369,4.29e-23,4;UBERON:0002435,4.29e-23,4;UBERON:0000204,4.29e-23,4;UBERON:0010082,4.29e-23,4;UBERON:0001873,2.55e-21,2;UBERON:0010122,2.55e-21,2;UBERON:0002148,5.20e-21,2;UBERON:0006331,5.20e-21,2;UBERON:0009662,5.20e-21,2;UBERON:0004733,6.76e-21,12;UBERON:0002028,6.76e-21,12;UBERON:0007277,6.76e-21,12;UBERON:0000341,2.12e-20,2;UBERON:0004732,2.75e-19,13;UBERON:0001049,4.40e-16,56;UBERON:0005068,4.40e-16,56;UBERON:0006241,4.40e-16,56;UBERON:0007135,4.40e-16,56;UBERON:0005383,1.51e-14,3;UBERON:0005382,1.51e-14,3;UBERON:0000988,2.42e-14,3;UBERON:0000073,7.57e-14,53;UBERON:0002616,7.57e-14,53;UBERON:0009663,1.81e-13,7;UBERON:0007023,8.22e-13,114;UBERON:0001301,1.45e-11,1;UBERON:0002336,2.42e-11,1;UBERON:0011215,2.42e-11,1;UBERON:0001018,2.42e-11,1;UBERON:0002473,2.42e-11,1;UBERON:0005340,2.42e-11,1;UBERON:0003544,2.42e-11,1;UBERON:0005970,2.42e-11,1;UBERON:0002316,2.42e-11,1;UBERON:0001020,2.42e-11,1;UBERON:0002437,2.42e-11,1;UBERON:0001882,4.91e-11,1;UBERON:0005403,4.91e-11,1;UBERON:0001017,1.33e-10,81;UBERON:0003075,1.33e-10,82;UBERON:0007284,1.33e-10,82;UBERON:0002420,1.34e-10,9;UBERON:0007245,1.34e-10,9;UBERON:0010009,1.34e-10,9;UBERON:0010011,1.34e-10,9;UBERON:0000454,1.34e-10,9;UBERON:0000955,2.08e-10,68;UBERON:0006238,2.08e-10,68;UBERON:0002346,4.77e-10,86;UBERON:0001016,2.01e-09,89;UBERON:0010371,4.44e-08,104;UBERON:0003528,4.83e-07,34;UBERON:0002020,4.83e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0.140669416410513,0,0,4.43363357068786,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,6.20018970069687,3.0149109656352,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,2.96564985114979,0,0.937057782901357,0,0.391329237864179,0,0.394584402849391,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,4.89234671077684,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0.67952103036807,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0.137539436597234,0,2.249738915515,3.0952078182318,0.242998226632099,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,2.90911723833918,0,0,0.747511887973863,16.0348391201659,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,7.45431954397093,5.32459447376891,1.42821726765182,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,1.35378591028663,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.628462359664008,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0.9164274741762,0,0,0.111855431797792,0.294450700845729,0.731507549893617,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0.829169439458779,0.827463966895162,1.27940389140589,1.66645102024618,0,0,0,0,0,0.217716747896961,0,0.134704106029175,6.02466525298481,0.665320713092027,0,0,0,0,2.34640942403454,0.611207220914332,0,0,0,0 | |||
|short_description=p2@CCDC42B | |||
}} |
Revision as of 16:01, 11 January 2014
Short description: | p2@CCDC42B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC42B_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -90bp_to_ENST00000335621, NM_001144872, uc010sys.1_5end |
EntrezGene: | CCDC42B |
HGNC: | 37100 |
UniProt: | A6NFT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.05e-21 | 2 |
immature CD1a-positive Langerhans cell | 7.05e-21 | 2 |
Langerhans cell | 6.44e-09 | 5 |
immature conventional dendritic cell | 1.43e-07 | 5 |
common dendritic progenitor | 1.43e-07 | 5 |