FFCP PHASE1:Hg19::chr15:84116106..84116144,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6457 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10832 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVP1 | |||
|association_with_transcript=0bp_to_ENST00000535412_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SH3GL3_5end | |||
|id=chr15:84116106..84116144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.40e-07;6!CL:0000404;4.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.79e-07,6;CL:0000031,4.79e-07,6;CL:0000404,4.79e-07,6;CL:0000047,7.82e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.24e-16;82!CL:0000031;4.40e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.51e-42!94;UBERON:0001016!3.51e-42!94;UBERON:0005743!1.25e-39!86;UBERON:0001017!8.16e-39!82;UBERON:0002346!2.83e-38!90;UBERON:0003075!2.24e-37!86;UBERON:0007284!2.24e-37!86;UBERON:0001049!2.52e-36!57;UBERON:0005068!2.52e-36!57;UBERON:0006241!2.52e-36!57;UBERON:0007135!2.52e-36!57;UBERON:0000924!9.06e-33!173;UBERON:0006601!9.06e-33!173;UBERON:0004121!1.13e-31!169;UBERON:0000153!2.31e-31!129;UBERON:0007811!2.31e-31!129;UBERON:0000955!6.38e-31!69;UBERON:0006238!6.38e-31!69;UBERON:0000033!2.09e-30!123;UBERON:0002780!1.12e-29!41;UBERON:0001890!1.12e-29!41;UBERON:0006240!1.12e-29!41;UBERON:0002616!1.14e-29!59;UBERON:0003080!1.91e-28!42;UBERON:0003056!3.39e-28!61;UBERON:0002020!5.87e-25!34;UBERON:0003528!5.87e-25!34;UBERON:0001893!6.19e-25!34;UBERON:0002791!3.41e-24!33;UBERON:0007023!3.98e-24!115;UBERON:0001869!2.98e-23!32;UBERON:0002619!3.59e-18!22;UBERON:0000956!5.97e-18!25;UBERON:0000203!5.97e-18!25;UBERON:0001950!1.32e-16!20;UBERON:0000475!4.69e-10!365;UBERON:0003076!5.88e-09!15;UBERON:0003057!5.88e-09!15;UBERON:0002308!1.73e-08!9;UBERON:0000125!1.73e-08!9;UBERON:0002420!1.93e-08!9;UBERON:0007245!1.93e-08!9;UBERON:0010009!1.93e-08!9;UBERON:0010011!1.93e-08!9;UBERON:0000454!1.93e-08!9;UBERON:0000064!4.81e-08!219;UBERON:0000481!1.18e-07!347;UBERON:0004732!1.53e-07!13;UBERON:0001871!5.02e-07!7;UBERON:0009663!6.51e-07!7;UBERON:0004733!9.35e-07!12;UBERON:0002028!9.35e-07!12;UBERON:0007277!9.35e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.60e-30;41!UBERON:0001890;3.60e-30;41!UBERON:0001893;4.22e-29;34!UBERON:0003528;4.51e-29;34!UBERON:0002020;4.51e-29;34!UBERON:0002791;1.13e-28;32!UBERON:0001869;1.40e-28;32!UBERON:0002619;6.94e-28;22!UBERON:0000073;1.54e-27;53!UBERON:0002616;1.54e-27;53!UBERON:0001950;2.11e-25;20!UBERON:0000956;1.28e-23;25!UBERON:0000203;1.28e-23;25!UBERON:0000955;3.45e-19;68!UBERON:0001017;8.60e-19;75!UBERON:0001016;3.76e-18;83!UBERON:0000125;1.70e-12;9!UBERON:0002308;1.70e-12;9!UBERON:0002420;1.99e-12;9!UBERON:0007245;1.99e-12;9!UBERON:0010009;1.99e-12;9!UBERON:0010011;1.99e-12;9!UBERON:0000454;1.99e-12;9!UBERON:0000922;5.56e-11;49!UBERON:0007023;7.00e-11;114!UBERON:0009663;5.10e-10;7!UBERON:0004732;2.55e-09;13!UBERON:0001871;4.76e-09;6!UBERON:0002298;1.04e-08;6!UBERON:0001894;1.04e-08;7!UBERON:0000200;1.24e-08;6!UBERON:0004733;3.86e-08;12!UBERON:0002028;3.86e-08;12!UBERON:0000349;1.24e-07;5!UBERON:0002021;1.35e-07;5!UBERON:0001872;2.47e-07;5!UBERON:0011216;2.49e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.95e-53,89;UBERON:0001049,1.95e-52,56;UBERON:0005068,1.95e-52,56;UBERON:0006241,1.95e-52,56;UBERON:0007135,1.95e-52,56;UBERON:0001017,8.64e-52,81;UBERON:0000073,1.27e-48,53;UBERON:0002616,1.27e-48,53;UBERON:0000955,3.60e-42,68;UBERON:0006238,3.60e-42,68;UBERON:0002780,5.78e-42,41;UBERON:0001890,5.78e-42,41;UBERON:0003080,5.78e-42,41;UBERON:0006240,5.78e-42,41;UBERON:0003075,1.31e-39,82;UBERON:0007284,1.31e-39,82;UBERON:0002346,2.17e-38,86;UBERON:0007023,4.08e-35,114;UBERON:0003528,1.64e-34,34;UBERON:0002020,1.64e-34,34;UBERON:0001893,1.78e-34,34;UBERON:0003056,3.19e-32,61;UBERON:0002791,5.41e-32,32;UBERON:0001869,7.53e-32,32;UBERON:0004121,8.08e-30,171;UBERON:0000924,8.08e-30,171;UBERON:0006601,8.08e-30,171;UBERON:0010371,3.21e-29,104;UBERON:0002619,7.85e-28,22;UBERON:0001950,2.39e-25,20;UBERON:0010314,3.46e-25,132;UBERON:0011216,6.87e-25,223;UBERON:0000956,1.42e-23,25;UBERON:0000203,1.42e-23,25;UBERON:0000125,1.66e-12,9;UBERON:0002308,1.66e-12,9;UBERON:0002420,1.96e-12,9;UBERON:0007245,1.96e-12,9;UBERON:0010009,1.96e-12,9;UBERON:0010011,1.96e-12,9;UBERON:0000454,1.96e-12,9;UBERON:0003076,1.78e-11,15;UBERON:0003057,1.78e-11,15;UBERON:0000025,4.69e-10,192;UBERON:0009663,5.00e-10,7;UBERON:0004732,2.56e-09,13;UBERON:0001871,5.34e-09,6;UBERON:0004111,5.65e-09,240;UBERON:0001894,8.57e-09,7;UBERON:0006222,8.57e-09,7;UBERON:0002298,1.04e-08,6;UBERON:0000200,1.28e-08,6;UBERON:0004733,3.87e-08,12;UBERON:0002028,3.87e-08,12;UBERON:0007277,3.87e-08,12;UBERON:0000349,1.24e-07,5;UBERON:0002021,1.34e-07,5;UBERON:0001872,2.46e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0.572471974262113,0.684372125364421,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19656404608826,0.361439152384566,0,0,0,0,0.567208902984407,1.55210578223795,0.614843499851882,20.6292043908897,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0.74000264525148,0.622422070799533,0,0.163461903113459,0,0,0.70296429550139,0,0,0,0.352303495931295,0.485618833104395,0.702254033511242,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,2.26304479546337,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,1.70763188581434,1.59035721985782,0.813357600086629,2.07322110030741,2.77552935963191,3.28479623168247,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,72.8414114034173,0,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,1.03993478527958,0,0.463721619900307,0.352226082707465,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0.93733833986777,0.671928512795438,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,2.39935178836937,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.508189248444927,16.9181810014908,19.3322203194424,19.4318867787845,19.1381625495949,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0.384417447767103,0,0,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0,0,0.616122696835318,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.824328093181778,0,0,0,0,0,0.386682873168488,0.308097234229289,0.767518373630648,0.137836572484531,0.107420244868274,0.725083469571143,1.02271952899321,0.623224249527161,0.165284915360978,0,0.638063562472921,0.2023155617111,0,0,0,0.616067160352178,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,1.08073945114433,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,1.4348364545594,0,0.957526850661834,0,0,0,0,0,62.6586192725168,0,0,0,0,0,0,0,0,0,2.78406173895242,0,10.2773157820874,0,0,0,0,0.970884173996107,0,0,0,0,0,83.508402412369,68.0839975426882,0.779160935160341,0,1.05562704063997,2.78947183551498,0,5.03865495708552,0,0,0,0,0.179021174675609,0,2.07151151837561,0,0,82.3932834180936,60.1137276088796,55.8918634403344,0.260427761085233,0,0,0.568967241427498,0,0.236387681767936,0.689486746482929,4.37406920074882,0.173624994933292,67.3163453218518,48.3591718887886,39.6712514424416,36.7123142971666,36.9434523691934,39.928142282023,0,12.8269844736315,1.53900517007594,0.113942055847001,9.2225561755224,0.359030577639089,37.4833433130928,0.31900115973192,0,0,0,0,0,8.1214437822185,6.66612616680314,5.53811237020281,0.189753732724185,0,1.26598838716816,0.326465616318295,0,0,0.995261931078505,0,0.611030144933625,1.48260564340311,0.988511511572023,0.835375596043643,134.600062562412,1.60515529459758,103.310620564875,0,0.782658475728359,0,0,1.20990716048664,43.7684049131601,0.947798694427319,4.66002600184927,3.11064574191741,1.32930774541437,0.992975867626496,2.19753042885058,1.19472429772959,0,1.66409607615766,1.21491816834592,0.881931576729399,2.35059857767087,3.14508002835654,2.0638323896594,0,0,0,2.5217144286989,0.0882561266915003,7.45736444575757,1.09633539717401,0.19871461170299,72.8074153492605,0,0.881747022766871,0,0,0,0.114536596165916,0,0,0.869767748958028,2.35694034616795,0.271808412147228,0,0.203996435272644,0.288950589901519,178.925246035517,147.310187687785,0,10.314370594079,0,0.558564802544508,1.83328339209347,0.717873024576814,0.199679000498991,0,0.223171457441873,3.15762320687613,0,0,0,0,0.0674035438541849,0,0,80.3181986707396,79.5427891691602,4.1795818600905,6.60189295666722,6.23160507043778,0,0,60.8103062146827,0.670869375198532,0.709251365692784,2.7276385830199,0,0,6.71703190618059,0,0,0.25426853765475,0,0,0,4.7892076624995,0.985110248992068,0.170388021785422,0.226624183040251,0,0,97.220783183886,77.620537222959,0,0,1.28144895081234,2.98688179689365,3.72815149812476,0,0,0,1.91502377331055,0,0,0,0,0.157054096250234,62.024772597689,71.7514437623543,77.3679951766169,67.0888758957383,50.9164346554152,61.5996317178524,2.62862406378839,0.124980407962107,0,0,0.235265819698172,5.1516839638757,0.144921028610825,0.149254802886874,0.701139929541673,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,2.10360652596106,1.14241563650639,0,0,0.751873899297419,0,0.398095888698616,0.800055529326307,0,0.336749488765919,0,0,14.5820282134949,0.782982875895635,2.72047110614727,0.231522474323834,0.489473409012935,0.895444205407437,4.32322026025361,1.75427239662966,0.530067437837643,2.70079653579281,0.168942440653073,0.512483037175893,0,1.21543982470953,89.1766913178663,0,0.132864840313363,0,0,0.491545817507439,0,0,1.8137594048004,0,0,0,0,1.24415452006595,7.80155664952275,0.107824811396682,2.98805289526203,2.29340240203229,13.408869866368,0.850299680406731,0.123935764259002,46.3675281917792,0,0,0,0,0,63.7153912956879,82.1840142688393,98.8133587563766,71.995843848505,74.6132220816286,49.8623790267011,72.0181379518056,316.948112975323,1.17777262201231,4.24691004051865,0.366857197043358,1.61735932610474,0.381382095467167,5.52287940848081,0.596748666348824,0.376051641746286,2.0170506870352,0,41.3812577280647,0,0,63.6879422951462,90.6050594392063,68.4133296418919,64.3670473468154,42.6640351034211,0,0,0.351742488719241,1.14986184875636,14.4639495687137,13.1150651665341,6.67662164660295,1.82129753081038,0.266107110487916,0.345701962667338,0,88.5645620688117,56.4988124904874,0.354581522651905,0.889851215136553,1.02041020705668,58.6041150386687,0,10.0447459256045,0,0.47775168788705,1.92986669276972,9.32280309223087,0,0.173858272302579,0,0.828864656652147,1.7071847709395,67.0521871959669,0,0.591660003652827,0.511280428554946,0,0.22910686854405,9.92660434125824,7.64431151181946,0,0,0,0,0,2.3196288626764,5.82853191670967,0,0,0.475680363110274,3.50132854320776,6.59643100472575,0,0.0771741581079447,3.93407208907123,0,4.6578181133242,0,98.7431589588175,51.0919808562588,112.426423537184,0,0.0939839179798536,0.386747327841463,0,0.535661815816973,0.705789743431384,0.0802413666891683,5.11235471772562,0.458729283404541,129.005624836306,0,58.4726815641866,47.5622252471011,0,0,0,0,4.41582486922776,0.655593431782173,0,3.3656313814854,0.534434810531121,3.21632148371957,1.75495277504663,22.6578307672536,40.9985119138953,131.837940873946,132.08393571564,2.77204176471275,3.57096647195611,7.94443590982875,7.57311514409466,2.24263725161227,0,0.404234377916439,5.87835219321796,10.6092323336437,1.88585748440845,1.14755528628282,6.32054677437425,9.36137589026207,0.320182037633146,1.9307228228694,0,4.69281884806909,0.366724332548599,2.03448089157869,0,3.01910690386539,0 | |||
|short_description=p1@SH3GL3 | |||
}} |
Revision as of 00:58, 12 January 2014
Short description: | p1@SH3GL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH3GL3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000535412_5end |
EntrezGene: | SH3GL3 |
HGNC: | 10832 |
UniProt: | Q8IVP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.79e-07 | 6 |
neuroblast | 4.79e-07 | 6 |
electrically signaling cell | 4.79e-07 | 6 |
neuronal stem cell | 7.82e-07 | 8 |