FFCP PHASE1:Hg19::chr1:114472484..114472505,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=204851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19006 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_uc001een.2_5end | |||
|description=CAGE_peak_2_at_HIPK1_5end | |||
|id=chr1:114472484..114472505,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.86e-20!42;CL:0000766!2.68e-19!76;CL:0000860!4.67e-19!45;CL:0000557!7.70e-18!71;CL:0000738!2.20e-17!140;CL:0000839!1.37e-16!70;CL:0000763!8.95e-16!112;CL:0000049!8.95e-16!112;CL:0000037!9.40e-16!172;CL:0000566!9.40e-16!172;CL:0002009!1.47e-14!65;CL:0000988!7.38e-14!182;CL:0002032!1.06e-13!165;CL:0000837!1.06e-13!165;CL:0002194!1.43e-13!63;CL:0000576!1.43e-13!63;CL:0000040!1.43e-13!63;CL:0000559!1.43e-13!63;CL:0002031!1.60e-13!124;CL:0002087!2.90e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.70e-25;33!CL:0002057;4.70e-25;33!CL:0000473;1.43e-17;39!CL:0000234;1.43e-17;39!CL:0000576;3.06e-17;48!CL:0000766;1.81e-15;69!CL:0000763;6.04e-09;100!CL:0000094;5.49e-08;8!CL:0002087;6.88e-08;104!CL:0000738;3.06e-07;136!CL:0000097;3.36e-07;5!CL:0000081;7.52e-07;11!CL:0002393;9.18e-07;6!CL:0002397;9.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.40e-33,72;CL:0000860,1.27e-31,42;CL:0002057,1.27e-31,42;CL:0000557,1.71e-29,67;CL:0000738,3.77e-29,136;CL:0000473,1.47e-27,48;CL:0000234,1.47e-27,48;CL:0000037,1.32e-26,168;CL:0000839,1.40e-26,66;CL:0000763,8.08e-26,108;CL:0000049,8.08e-26,108;CL:0000988,8.30e-25,177;CL:0002032,4.33e-24,161;CL:0000837,4.33e-24,161;CL:0002031,1.05e-23,120;CL:0002009,1.48e-23,61;CL:0002194,8.97e-22,59;CL:0000576,8.97e-22,59;CL:0000040,8.97e-22,59;CL:0000559,8.97e-22,59;CL:0002087,1.05e-19,115;CL:0000094,5.01e-08,8;CL:0000097,3.43e-07,5;CL:0002028,3.43e-07,5;CL:0000081,6.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.94e-23;42!CL:0000049;2.85e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.95e-20!102;UBERON:0003061!2.95e-20!102;UBERON:0002193!4.59e-18!112;UBERON:0007023!1.68e-16!115;UBERON:0002371!8.87e-15!80;UBERON:0001474!1.48e-14!86;UBERON:0004765!3.02e-11!101;UBERON:0001434!3.02e-11!101;UBERON:0002405!3.99e-11!115;UBERON:0001049!7.40e-09!57;UBERON:0005068!7.40e-09!57;UBERON:0006241!7.40e-09!57;UBERON:0007135!7.40e-09!57;UBERON:0002616!2.34e-08!59;UBERON:0001017!2.70e-08!82;UBERON:0000955!8.34e-08!69;UBERON:0006238!8.34e-08!69;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0005743!2.05e-07!86;UBERON:0003080!4.01e-07!42;UBERON:0000073!8.54e-07!94;UBERON:0001016!8.54e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.05e-07;53!UBERON:0002616;4.05e-07;53!UBERON:0000178;9.08e-07;15!UBERON:0000179;9.08e-07;15!UBERON:0000463;9.08e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.96e-33,98;UBERON:0003061,7.96e-33,98;UBERON:0002193,1.03e-27,108;UBERON:0002371,1.31e-26,76;UBERON:0001474,1.30e-24,82;UBERON:0002405,5.15e-22,93;UBERON:0004765,7.37e-21,90;UBERON:0001434,7.63e-18,100;UBERON:0007023,2.89e-13,114;UBERON:0001049,1.11e-11,56;UBERON:0005068,1.11e-11,56;UBERON:0006241,1.11e-11,56;UBERON:0007135,1.11e-11,56;UBERON:0000073,6.07e-11,53;UBERON:0002616,6.07e-11,53;UBERON:0000955,6.74e-10,68;UBERON:0006238,6.74e-10,68;UBERON:0001017,7.24e-10,81;UBERON:0003081,5.02e-09,203;UBERON:0001016,2.28e-08,89;UBERON:0002346,5.31e-08,86;UBERON:0003075,1.76e-07,82;UBERON:0007284,1.76e-07,82;UBERON:0002780,3.56e-07,41;UBERON:0001890,3.56e-07,41;UBERON:0003080,3.56e-07,41;UBERON:0006240,3.56e-07,41;UBERON:0002204,8.20e-07,167;UBERON:0000178,9.51e-07,15;UBERON:0000179,9.51e-07,15;UBERON:0000463,9.51e-07,15 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,0,0.893922188854576,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0,0.821246550437305,0,0.152826811495903,0,0.0787107813136792,3.14691421479123,6.90892916574983,3.71558695958582,0,0,0,0.0774672005803016,0.142169232487422,2.64240395401362,4.43196326825502,7.82123345133553,7.59538047505481,0.223915474239924,0,0.257575567634187,2.76256653681173,3.02300754951048,3.15359279544161,3.48643555358527,0.822335776043652,2.16794459626573,3.16461631554365,3.84241059793651,2.12834006899727,6.55016793399575,1.29096936716765,5.41705946377367,3.38836211176688,3.27487380069415,1.79778787556068,4.59125838556354,2.56743221660875,3.19668562899521,4.94776950280074,2.39356389145958,1.27867425159808,4.35313857942876,3.97169657283798,1.24564449799115,3.76872997885115,5.73631210262222,1.52032191293582,4.84319602106695,2.94622108790052,3.16462387440884,1.05627643155971,1.27562579979026,1.25795187305026,0.898629049171961,1.20141514273205,2.89306056054744,0.570025487482497,1.19350006319454,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,1.1384259382189,2.93618594685469,5.3518251937532,0,4.48406850385229,2.37045676297569,11.2124568964885,15.7204305099666,5.14003747498773,0.501559486172034,0.977766799900771,0.946895611469467,0,1.00269411196656,0.589211814949674,0.886135578334485,1.08321545506006,0.384273959177026,0.780356085359269,0.328875809207352,0,0.579606171470105,1.03800594213442,0.802622484269139,1.04535523804977,0.566546713487831,2.68254345521345,2.74901956386104,2.02415753615602,0.318565414324097,0,0,0.752875595388864,0.255973222308837,1.24930726552346,1.18388626022008,0,9.07230344511296,6.68600489458768,7.67569340578835,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0,0.795285947051099,0,0.0945348171640679,0.665188192387692,0.263504357079378,1.63723844372141,0,0,0.324547393654683,0.522389211897802,0.26591592103773,1.90792499444274,1.71598473234038,0.74291500265913,0.39752481473341,0.860234595106124,0,0.56530794192401,0.419499436209906,0.825354125820202,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,7.75560528296651,0,2.48485975847659,0.759783069987479,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0.326923806226917,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0.438977620880838,0,0.751190294532984,0.113432183160021,0.358779271377724,0.640672166455702,0,0.900273288253207,0,0,0.18611685633159,0.337552664482532,0.194874010322397,0,0.184099797284599,0.161646056818812,1.06502877754984,0.302256294682921,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0.397589304964456,0.464775771478074,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0.380508304469197,1.58040879591855,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0,3.94130590316755,2.28925928434388,6.01251535068239,9.22367701868553,9.34194007355212,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0.61642896765115,0.358121926479791,0.784596007954691,6.30498432646167,7.76259269494262,8.34229735818364,1.01637849688985,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,3.74503511973591,11.966458368161,3.72973962092432,0.49076596687656,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.702848489956279,0.902838299183157,0,0,0,0.184369168541703,0.260650843404249,0,0.686286847621712,2.48121631347465,4.09856981555372,1.17400313583789,0.606255142892519,0,0,0.744323423456331,1.2276957863045,0.561320188866147,0.896974044789907,0,0.321707842287215,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0.241718899183244,0.601519410909855,0.276242966807689,0.229628896329213,0.546273504020151,0.131124414959424,0,0,0,0,0.422206515571503,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,1.53481913652154,0.522870902049801,0,0,0,0.515205058238611,0.457847324091717,0.082509499920588,0,1.95018073810956,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0.356128142586949,0.165284915360978,0.576570202095319,0.255225424989168,0.6069466851333,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0.274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| |||
|short_description=p2@HIPK1 | |||
}} |
Revision as of 20:15, 10 January 2014
Short description: | p2@HIPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIPK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_uc001een.2_5end |
EntrezGene: | HIPK1 |
HGNC: | 19006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.40e-33 | 72 |
classical monocyte | 1.27e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-31 | 42 |
granulocyte monocyte progenitor cell | 1.71e-29 | 67 |
leukocyte | 3.77e-29 | 136 |
defensive cell | 1.47e-27 | 48 |
phagocyte | 1.47e-27 | 48 |
hematopoietic stem cell | 1.32e-26 | 168 |
myeloid lineage restricted progenitor cell | 1.40e-26 | 66 |
myeloid cell | 8.08e-26 | 108 |
common myeloid progenitor | 8.08e-26 | 108 |
hematopoietic cell | 8.30e-25 | 177 |
hematopoietic oligopotent progenitor cell | 4.33e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.33e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 1.05e-23 | 120 |
macrophage dendritic cell progenitor | 1.48e-23 | 61 |
monopoietic cell | 8.97e-22 | 59 |
monocyte | 8.97e-22 | 59 |
monoblast | 8.97e-22 | 59 |
promonocyte | 8.97e-22 | 59 |
nongranular leukocyte | 1.05e-19 | 115 |
granulocyte | 5.01e-08 | 8 |
mast cell | 3.43e-07 | 5 |
basophil mast progenitor cell | 3.43e-07 | 5 |
blood cell | 6.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.96e-33 | 98 |
blood island | 7.96e-33 | 98 |
hemolymphoid system | 1.03e-27 | 108 |
bone marrow | 1.31e-26 | 76 |
bone element | 1.30e-24 | 82 |
immune system | 5.15e-22 | 93 |
skeletal element | 7.37e-21 | 90 |
skeletal system | 7.63e-18 | 100 |
adult organism | 2.89e-13 | 114 |
neural tube | 1.11e-11 | 56 |
neural rod | 1.11e-11 | 56 |
future spinal cord | 1.11e-11 | 56 |
neural keel | 1.11e-11 | 56 |
regional part of nervous system | 6.07e-11 | 53 |
regional part of brain | 6.07e-11 | 53 |
brain | 6.74e-10 | 68 |
future brain | 6.74e-10 | 68 |
central nervous system | 7.24e-10 | 81 |
lateral plate mesoderm | 5.02e-09 | 203 |
nervous system | 2.28e-08 | 89 |
neurectoderm | 5.31e-08 | 86 |
neural plate | 1.76e-07 | 82 |
presumptive neural plate | 1.76e-07 | 82 |
regional part of forebrain | 3.56e-07 | 41 |
forebrain | 3.56e-07 | 41 |
anterior neural tube | 3.56e-07 | 41 |
future forebrain | 3.56e-07 | 41 |
musculoskeletal system | 8.20e-07 | 167 |
blood | 9.51e-07 | 15 |
haemolymphatic fluid | 9.51e-07 | 15 |
organism substance | 9.51e-07 | 15 |