FFCP PHASE1:Mm9::chr19:47253871..47253902,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=39|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47253871..47253902,+|id=chr19:47253871..47253902,+|ontology_enrichment_celltype=CL:0000540!5.35e-17!33;CL:0000047!5.35e-17!33;CL:0000031!5.35e-17!33;CL:0000404!5.35e-17!33;CL:0000393!2.44e-13!39;CL:0000211!2.44e-13!39;CL:0000117!8.89e-12!23;CL:0000337!8.89e-12!23;CL:0002319!4.23e-11!43;CL:0000221!1.58e-10!44;CL:0000133!1.58e-10!44;CL:0000055!1.58e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.78e-21,33;CL:0000047,1.78e-21,33;CL:0000031,1.78e-21,33;CL:0000404,1.78e-21,33;CL:0000393,4.73e-17,39;CL:0000211,4.73e-17,39;CL:0000117,3.81e-15,23;CL:0000337,3.81e-15,23;CL:0002319,8.38e-15,43;CL:0000221,2.63e-14,44;CL:0000133,2.63e-14,44;CL:0000107,2.43e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.61e-34!73;UBERON:0005743!6.61e-34!73;UBERON:0000073!4.06e-32!75;UBERON:0001016!4.06e-32!75;UBERON:0002346!3.91e-28!71;UBERON:0003075!3.91e-28!71;UBERON:0007284!3.91e-28!71;UBERON:0004121!7.33e-28!102;UBERON:0000924!7.33e-28!102;UBERON:0006601!7.33e-28!102;UBERON:0001049!1.06e-24!52;UBERON:0005068!1.06e-24!52;UBERON:0006241!1.06e-24!52;UBERON:0007135!1.06e-24!52;UBERON:0000955!1.62e-23!50;UBERON:0006238!1.62e-23!50;UBERON:0002616!5.98e-23!49;UBERON:0000033!4.41e-22!63;UBERON:0003080!1.20e-19!40;UBERON:0002780!6.14e-19!39;UBERON:0001890!6.14e-19!39;UBERON:0006240!6.14e-19!39;UBERON:0003056!8.89e-19!49;UBERON:0002020!2.78e-17!34;UBERON:0002791!3.24e-14!29;UBERON:0003528!3.24e-14!29;UBERON:0001893!3.24e-14!29;UBERON:0007811!3.35e-11!86;UBERON:0000956!1.39e-09!21;UBERON:0001869!1.39e-09!21;UBERON:0000203!1.39e-09!21;UBERON:0002021!4.54e-09!10;UBERON:0000411!4.54e-09!10;UBERON:0001950!4.54e-09!10;UBERON:0000153!7.52e-09!94;UBERON:0002619!7.69e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-51,73;UBERON:0001016,5.87e-50,75;UBERON:0000073,6.53e-42,54;UBERON:0004121,1.03e-39,95;UBERON:0000924,1.03e-39,95;UBERON:0006601,1.03e-39,95;UBERON:0001049,5.98e-39,52;UBERON:0005068,5.98e-39,52;UBERON:0006241,5.98e-39,52;UBERON:0007135,5.98e-39,52;UBERON:0002346,1.92e-38,64;UBERON:0003075,1.92e-38,64;UBERON:0007284,1.92e-38,64;UBERON:0000955,1.07e-32,47;UBERON:0006238,1.07e-32,47;UBERON:0010371,3.93e-32,73;UBERON:0002616,1.18e-31,46;UBERON:0003080,5.48e-28,40;UBERON:0002020,9.71e-27,34;UBERON:0002780,1.08e-26,39;UBERON:0001890,1.08e-26,39;UBERON:0006240,1.08e-26,39;UBERON:0010314,2.72e-25,92;UBERON:0003056,2.18e-24,49;UBERON:0003528,5.60e-21,29;UBERON:0002791,5.60e-21,29;UBERON:0001893,5.60e-21,29;UBERON:0002021,3.37e-16,10;UBERON:0000411,3.37e-16,10;UBERON:0001950,3.37e-16,10;UBERON:0002619,8.86e-14,17;UBERON:0000956,1.91e-12,21;UBERON:0001869,1.91e-12,21;UBERON:0000203,1.91e-12,21;UBERON:0011216,4.62e-12,194;UBERON:0000025,1.48e-11,114;UBERON:0003076,6.30e-11,12;UBERON:0003057,6.30e-11,12;UBERON:0004111,7.45e-11,122;UBERON:0002420,2.86e-10,8;UBERON:0007245,2.86e-10,8;UBERON:0010009,2.86e-10,8;UBERON:0010011,2.86e-10,8;UBERON:0000454,2.86e-10,8;UBERON:0002410,2.43e-08,9;UBERON:0002240,3.70e-08,6;UBERON:0005174,3.70e-08,6;UBERON:0001137,3.70e-08,6;UBERON:0001948,4.07e-07,5;UBERON:0002315,4.07e-07,5;UBERON:0000119,8.57e-07,176|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,1.90149421051854,0,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.405017814995072,0.420649922702764,4.57041575046086,3.53389665522582,0.61245399607477,0.575072826109418,1.83843757322004,7.70811166995721,5.49055553766307,5.06901559745603,1.05509030184155,1.73826522844578,1.56274011167028,5.58365998002762,3.93933827022176,6.57032465440283,5.30331453852602,3.27454865837937,1.86399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,1.1875371125186,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,1.17588707135705,0.502666365318702,0,0,0,0,0,0,1.86391761218122,33.0842300623048,26.8091784721222,0,0,0,0,5.69204429738326,19.2150253183823,3.26701315493447,15.2965401769203,11.7629110371952,8.3115217823824,10.8701646255398,0.101839363850316,0.124406970610093,0.505445516867349,1.47309299120532,0,0,0,0.150704817835715,0.272145996605311,0.768682321709099,0.749613796477831,2.84573707812917,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2997165023607,1.02904612379284,0,0,0,0.464473343720877,0.38660238396628,0,0.22237804384487,0.951128130562796,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0,0.1594547686574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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:47253871..47253902,+ | |||
|description=CAGE_peak_at_chr19:47253871..47253902,+ | |||
|id=chr19:47253871..47253902,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.35e-17!33;CL:0000047!5.35e-17!33;CL:0000031!5.35e-17!33;CL:0000404!5.35e-17!33;CL:0000393!2.44e-13!39;CL:0000211!2.44e-13!39;CL:0000117!8.89e-12!23;CL:0000337!8.89e-12!23;CL:0002319!4.23e-11!43;CL:0000221!1.58e-10!44;CL:0000133!1.58e-10!44;CL:0000055!1.58e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.78e-21,33;CL:0000047,1.78e-21,33;CL:0000031,1.78e-21,33;CL:0000404,1.78e-21,33;CL:0000393,4.73e-17,39;CL:0000211,4.73e-17,39;CL:0000117,3.81e-15,23;CL:0000337,3.81e-15,23;CL:0002319,8.38e-15,43;CL:0000221,2.63e-14,44;CL:0000133,2.63e-14,44;CL:0000107,2.43e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.61e-34!73;UBERON:0005743!6.61e-34!73;UBERON:0000073!4.06e-32!75;UBERON:0001016!4.06e-32!75;UBERON:0002346!3.91e-28!71;UBERON:0003075!3.91e-28!71;UBERON:0007284!3.91e-28!71;UBERON:0004121!7.33e-28!102;UBERON:0000924!7.33e-28!102;UBERON:0006601!7.33e-28!102;UBERON:0001049!1.06e-24!52;UBERON:0005068!1.06e-24!52;UBERON:0006241!1.06e-24!52;UBERON:0007135!1.06e-24!52;UBERON:0000955!1.62e-23!50;UBERON:0006238!1.62e-23!50;UBERON:0002616!5.98e-23!49;UBERON:0000033!4.41e-22!63;UBERON:0003080!1.20e-19!40;UBERON:0002780!6.14e-19!39;UBERON:0001890!6.14e-19!39;UBERON:0006240!6.14e-19!39;UBERON:0003056!8.89e-19!49;UBERON:0002020!2.78e-17!34;UBERON:0002791!3.24e-14!29;UBERON:0003528!3.24e-14!29;UBERON:0001893!3.24e-14!29;UBERON:0007811!3.35e-11!86;UBERON:0000956!1.39e-09!21;UBERON:0001869!1.39e-09!21;UBERON:0000203!1.39e-09!21;UBERON:0002021!4.54e-09!10;UBERON:0000411!4.54e-09!10;UBERON:0001950!4.54e-09!10;UBERON:0000153!7.52e-09!94;UBERON:0002619!7.69e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-51,73;UBERON:0001016,5.87e-50,75;UBERON:0000073,6.53e-42,54;UBERON:0004121,1.03e-39,95;UBERON:0000924,1.03e-39,95;UBERON:0006601,1.03e-39,95;UBERON:0001049,5.98e-39,52;UBERON:0005068,5.98e-39,52;UBERON:0006241,5.98e-39,52;UBERON:0007135,5.98e-39,52;UBERON:0002346,1.92e-38,64;UBERON:0003075,1.92e-38,64;UBERON:0007284,1.92e-38,64;UBERON:0000955,1.07e-32,47;UBERON:0006238,1.07e-32,47;UBERON:0010371,3.93e-32,73;UBERON:0002616,1.18e-31,46;UBERON:0003080,5.48e-28,40;UBERON:0002020,9.71e-27,34;UBERON:0002780,1.08e-26,39;UBERON:0001890,1.08e-26,39;UBERON:0006240,1.08e-26,39;UBERON:0010314,2.72e-25,92;UBERON:0003056,2.18e-24,49;UBERON:0003528,5.60e-21,29;UBERON:0002791,5.60e-21,29;UBERON:0001893,5.60e-21,29;UBERON:0002021,3.37e-16,10;UBERON:0000411,3.37e-16,10;UBERON:0001950,3.37e-16,10;UBERON:0002619,8.86e-14,17;UBERON:0000956,1.91e-12,21;UBERON:0001869,1.91e-12,21;UBERON:0000203,1.91e-12,21;UBERON:0011216,4.62e-12,194;UBERON:0000025,1.48e-11,114;UBERON:0003076,6.30e-11,12;UBERON:0003057,6.30e-11,12;UBERON:0004111,7.45e-11,122;UBERON:0002420,2.86e-10,8;UBERON:0007245,2.86e-10,8;UBERON:0010009,2.86e-10,8;UBERON:0010011,2.86e-10,8;UBERON:0000454,2.86e-10,8;UBERON:0002410,2.43e-08,9;UBERON:0002240,3.70e-08,6;UBERON:0005174,3.70e-08,6;UBERON:0001137,3.70e-08,6;UBERON:0001948,4.07e-07,5;UBERON:0002315,4.07e-07,5;UBERON:0000119,8.57e-07,176 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,1.90149421051854,0,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.405017814995072,0.420649922702764,4.57041575046086,3.53389665522582,0.61245399607477,0.575072826109418,1.83843757322004,7.70811166995721,5.49055553766307,5.06901559745603,1.05509030184155,1.73826522844578,1.56274011167028,5.58365998002762,3.93933827022176,6.57032465440283,5.30331453852602,3.27454865837937,1.86399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,1.1875371125186,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,1.17588707135705,0.502666365318702,0,0,0,0,0,0,1.86391761218122,33.0842300623048,26.8091784721222,0,0,0,0,5.69204429738326,19.2150253183823,3.26701315493447,15.2965401769203,11.7629110371952,8.3115217823824,10.8701646255398,0.101839363850316,0.124406970610093,0.505445516867349,1.47309299120532,0,0,0,0.150704817835715,0.272145996605311,0.768682321709099,0.749613796477831,2.84573707812917,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2997165023607,1.02904612379284,0,0,0,0.464473343720877,0.38660238396628,0,0.22237804384487,0.951128130562796,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,4.0137647496948,3.5163505977661,0,0,2.83957397474631,1.17131623288992,4.30846795465598,0.955875191810208,2.45078541490634,2.83076530788832,1.21443210502468,2.04579100537918,5.13874111330481,1.92792789853084,0.283880170416537,0.534196811001766,0.162886959353576,0.824850614862677,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,12.2558258071364,0.18006109403131,0.388076051348264,0.428674070063185,2.48276327099183,2.49716344642899,2.30368628842969,6.39376393140658,0,0,0.441056796109924,0,0,0,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.418176592028937,0.655087691238533,0.404593039154462,0.743881101528023,0,0,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,2.12508553435409,0.375364950902364,0,0,0,12.4245405375755,8.28585425712918,10.8850147553485,15.4667864109319,15.0718154349541,12.0863023582352,18.2256075062588,12.6089936902782,14.5005570874945,11.39072685854,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,1.11123363900808,0.618105171716683,0.962757628775446,0.505394423527595,0,0.565879024158229,0.187283014939765,0.576226371643824,0.459483751644906,0.476293691283074,0.463537303779422,0.192909220463705,0,0.735994600671987,0.342869252385415,0.70990322463735,0.238436189947321,0.581385666529314,0.188218760830661,0.25384382367503,0.365855945745545,0,0.407412341537585,0.561142271657738,0.711810108745045,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0,0.859484216193193,0.765153328275374,0,0 | |||
|short_description=p@chr19:47253871..47253902,+ | |||
}} |
Latest revision as of 06:28, 4 August 2015
Short description: | p@chr19:47253871..47253902, + |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47253871..47253902, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.78e-21 | 33 |
neuronal stem cell | 1.78e-21 | 33 |
neuroblast | 1.78e-21 | 33 |
electrically signaling cell | 1.78e-21 | 33 |
electrically responsive cell | 4.73e-17 | 39 |
electrically active cell | 4.73e-17 | 39 |
CNS neuron (sensu Vertebrata) | 3.81e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-15 | 23 |
neural cell | 8.38e-15 | 43 |
ectodermal cell | 2.63e-14 | 44 |
neurectodermal cell | 2.63e-14 | 44 |
autonomic neuron | 2.43e-08 | 9 |