FFCP PHASE1:Mm9::chr1:33537358..33537375,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=20|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:33537358..33537375,-|id=chr1:33537358..33537375,-|ontology_enrichment_celltype=CL:0000117!6.74e-19!23;CL:0000337!6.74e-19!23;CL:0000540!9.85e-12!33;CL:0000047!9.85e-12!33;CL:0000031!9.85e-12!33;CL:0000404!9.85e-12!33;CL:0000393!3.12e-09!39;CL:0000211!3.12e-09!39;CL:0002319!5.38e-09!43;CL:0000221!1.10e-08!44;CL:0000133!1.10e-08!44;CL:0000055!4.22e-07!50;CL:0002614!8.62e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,2.04e-18,23;CL:0000337,2.04e-18,23;CL:0002614,1.06e-17,3;CL:0002610,2.02e-17,3;CL:0000540,1.60e-12,33;CL:0000047,1.60e-12,33;CL:0000031,1.60e-12,33;CL:0000404,1.60e-12,33;CL:0002611,1.06e-11,2;CL:0000393,1.99e-10,39;CL:0000211,1.99e-10,39;CL:0002319,2.35e-09,43;CL:0000221,4.06e-09,44;CL:0000133,4.06e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.63e-17!73;UBERON:0005743!1.63e-17!73;UBERON:0000073!8.26e-17!75;UBERON:0001016!8.26e-17!75;UBERON:0001049!1.47e-15!52;UBERON:0005068!1.47e-15!52;UBERON:0006241!1.47e-15!52;UBERON:0007135!1.47e-15!52;UBERON:0002616!2.19e-15!49;UBERON:0000955!6.07e-15!50;UBERON:0006238!6.07e-15!50;UBERON:0004121!9.27e-15!102;UBERON:0000924!9.27e-15!102;UBERON:0006601!9.27e-15!102;UBERON:0002420!2.47e-14!8;UBERON:0007245!2.47e-14!8;UBERON:0010009!2.47e-14!8;UBERON:0010011!2.47e-14!8;UBERON:0000454!2.47e-14!8;UBERON:0002346!8.86e-14!71;UBERON:0003075!8.86e-14!71;UBERON:0007284!8.86e-14!71;UBERON:0000033!9.86e-13!63;UBERON:0002298!4.61e-12!6;UBERON:0002020!1.44e-09!34;UBERON:0000369!3.87e-09!5;UBERON:0002435!3.87e-09!5;UBERON:0000204!3.87e-09!5;UBERON:0010082!3.87e-09!5;UBERON:0003076!7.46e-09!12;UBERON:0003057!7.46e-09!12;UBERON:0003080!9.61e-09!40;UBERON:0002950!1.52e-08!4;UBERON:0001891!1.52e-08!4;UBERON:0009616!1.52e-08!4;UBERON:0007811!2.76e-08!86;UBERON:0003056!2.92e-08!49;UBERON:0002780!9.19e-08!39;UBERON:0001890!9.19e-08!39;UBERON:0006240!9.19e-08!39;UBERON:0002791!2.50e-07!29;UBERON:0003528!2.50e-07!29;UBERON:0001893!2.50e-07!29;UBERON:0000153!5.29e-07!94;UBERON:0002038!8.62e-07!3;UBERON:0002308!8.62e-07!3;UBERON:0009663!8.62e-07!3;UBERON:0009661!8.62e-07!3;UBERON:0006331!8.62e-07!3;UBERON:0000125!8.62e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002420,3.11e-24,8;UBERON:0007245,3.11e-24,8;UBERON:0010009,3.11e-24,8;UBERON:0010011,3.11e-24,8;UBERON:0000454,3.11e-24,8;UBERON:0002950,4.28e-23,4;UBERON:0001891,4.28e-23,4;UBERON:0009616,4.28e-23,4;UBERON:0010286,4.28e-23,4;UBERON:0000073,2.77e-21,54;UBERON:0002038,1.06e-17,3;UBERON:0009663,1.06e-17,3;UBERON:0009661,1.06e-17,3;UBERON:0000125,1.06e-17,3;UBERON:0002308,1.06e-17,3;UBERON:0001017,1.09e-17,73;UBERON:0004684,2.02e-17,3;UBERON:0002275,2.02e-17,3;UBERON:0001016,3.61e-17,75;UBERON:0001049,2.26e-16,52;UBERON:0005068,2.26e-16,52;UBERON:0006241,2.26e-16,52;UBERON:0007135,2.26e-16,52;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002346,5.50e-13,64;UBERON:0003075,5.50e-13,64;UBERON:0007284,5.50e-13,64;UBERON:0001896,1.56e-12,2;UBERON:0002298,1.56e-12,2;UBERON:0005290,1.56e-12,2;UBERON:0010096,1.56e-12,2;UBERON:0002256,1.06e-11,2;UBERON:0003076,1.12e-11,12;UBERON:0003057,1.12e-11,12;UBERON:0010371,3.59e-11,73;UBERON:0002616,8.06e-11,46;UBERON:0000955,1.46e-10,47;UBERON:0006238,1.46e-10,47;UBERON:0000369,4.86e-10,5;UBERON:0002435,4.86e-10,5;UBERON:0000204,4.86e-10,5;UBERON:0010082,4.86e-10,5;UBERON:0002020,2.09e-09,34;UBERON:0002240,6.99e-09,6;UBERON:0005174,6.99e-09,6;UBERON:0001137,6.99e-09,6;UBERON:0010314,1.70e-08,92;UBERON:0003080,6.05e-08,40;UBERON:0002259,4.68e-07,1;UBERON:0002314,4.68e-07,1;UBERON:0004061,4.68e-07,1;UBERON:0006777,4.68e-07,1;UBERON:0005882,4.68e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.85650984403804,1.32521124570968,0.122490799214954,0.0958454710182364,0,3.30347642998166,2.42605942361857,3.84016333140609,0.659431438650969,0.274462930807229,1.04182674111352,6.70039197603314,5.06486349028512,1.98637722109853,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,4.94309110035915,1.37250180845588,1.88481528169297,0.173824320192276,0.255715457330331,2.28566849015516,0.811206315338788,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p@chr1:33537358..33537375,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:33537358..33537375,- | |||
|description=CAGE_peak_at_chr1:33537358..33537375,- | |||
|id=chr1:33537358..33537375,- | |||
|ontology_enrichment_celltype=CL:0000117!6.74e-19!23;CL:0000337!6.74e-19!23;CL:0000540!9.85e-12!33;CL:0000047!9.85e-12!33;CL:0000031!9.85e-12!33;CL:0000404!9.85e-12!33;CL:0000393!3.12e-09!39;CL:0000211!3.12e-09!39;CL:0002319!5.38e-09!43;CL:0000221!1.10e-08!44;CL:0000133!1.10e-08!44;CL:0000055!4.22e-07!50;CL:0002614!8.62e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.04e-18,23;CL:0000337,2.04e-18,23;CL:0002614,1.06e-17,3;CL:0002610,2.02e-17,3;CL:0000540,1.60e-12,33;CL:0000047,1.60e-12,33;CL:0000031,1.60e-12,33;CL:0000404,1.60e-12,33;CL:0002611,1.06e-11,2;CL:0000393,1.99e-10,39;CL:0000211,1.99e-10,39;CL:0002319,2.35e-09,43;CL:0000221,4.06e-09,44;CL:0000133,4.06e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-17!73;UBERON:0005743!1.63e-17!73;UBERON:0000073!8.26e-17!75;UBERON:0001016!8.26e-17!75;UBERON:0001049!1.47e-15!52;UBERON:0005068!1.47e-15!52;UBERON:0006241!1.47e-15!52;UBERON:0007135!1.47e-15!52;UBERON:0002616!2.19e-15!49;UBERON:0000955!6.07e-15!50;UBERON:0006238!6.07e-15!50;UBERON:0004121!9.27e-15!102;UBERON:0000924!9.27e-15!102;UBERON:0006601!9.27e-15!102;UBERON:0002420!2.47e-14!8;UBERON:0007245!2.47e-14!8;UBERON:0010009!2.47e-14!8;UBERON:0010011!2.47e-14!8;UBERON:0000454!2.47e-14!8;UBERON:0002346!8.86e-14!71;UBERON:0003075!8.86e-14!71;UBERON:0007284!8.86e-14!71;UBERON:0000033!9.86e-13!63;UBERON:0002298!4.61e-12!6;UBERON:0002020!1.44e-09!34;UBERON:0000369!3.87e-09!5;UBERON:0002435!3.87e-09!5;UBERON:0000204!3.87e-09!5;UBERON:0010082!3.87e-09!5;UBERON:0003076!7.46e-09!12;UBERON:0003057!7.46e-09!12;UBERON:0003080!9.61e-09!40;UBERON:0002950!1.52e-08!4;UBERON:0001891!1.52e-08!4;UBERON:0009616!1.52e-08!4;UBERON:0007811!2.76e-08!86;UBERON:0003056!2.92e-08!49;UBERON:0002780!9.19e-08!39;UBERON:0001890!9.19e-08!39;UBERON:0006240!9.19e-08!39;UBERON:0002791!2.50e-07!29;UBERON:0003528!2.50e-07!29;UBERON:0001893!2.50e-07!29;UBERON:0000153!5.29e-07!94;UBERON:0002038!8.62e-07!3;UBERON:0002308!8.62e-07!3;UBERON:0009663!8.62e-07!3;UBERON:0009661!8.62e-07!3;UBERON:0006331!8.62e-07!3;UBERON:0000125!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,3.11e-24,8;UBERON:0007245,3.11e-24,8;UBERON:0010009,3.11e-24,8;UBERON:0010011,3.11e-24,8;UBERON:0000454,3.11e-24,8;UBERON:0002950,4.28e-23,4;UBERON:0001891,4.28e-23,4;UBERON:0009616,4.28e-23,4;UBERON:0010286,4.28e-23,4;UBERON:0000073,2.77e-21,54;UBERON:0002038,1.06e-17,3;UBERON:0009663,1.06e-17,3;UBERON:0009661,1.06e-17,3;UBERON:0000125,1.06e-17,3;UBERON:0002308,1.06e-17,3;UBERON:0001017,1.09e-17,73;UBERON:0004684,2.02e-17,3;UBERON:0002275,2.02e-17,3;UBERON:0001016,3.61e-17,75;UBERON:0001049,2.26e-16,52;UBERON:0005068,2.26e-16,52;UBERON:0006241,2.26e-16,52;UBERON:0007135,2.26e-16,52;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002346,5.50e-13,64;UBERON:0003075,5.50e-13,64;UBERON:0007284,5.50e-13,64;UBERON:0001896,1.56e-12,2;UBERON:0002298,1.56e-12,2;UBERON:0005290,1.56e-12,2;UBERON:0010096,1.56e-12,2;UBERON:0002256,1.06e-11,2;UBERON:0003076,1.12e-11,12;UBERON:0003057,1.12e-11,12;UBERON:0010371,3.59e-11,73;UBERON:0002616,8.06e-11,46;UBERON:0000955,1.46e-10,47;UBERON:0006238,1.46e-10,47;UBERON:0000369,4.86e-10,5;UBERON:0002435,4.86e-10,5;UBERON:0000204,4.86e-10,5;UBERON:0010082,4.86e-10,5;UBERON:0002020,2.09e-09,34;UBERON:0002240,6.99e-09,6;UBERON:0005174,6.99e-09,6;UBERON:0001137,6.99e-09,6;UBERON:0010314,1.70e-08,92;UBERON:0003080,6.05e-08,40;UBERON:0002259,4.68e-07,1;UBERON:0002314,4.68e-07,1;UBERON:0004061,4.68e-07,1;UBERON:0006777,4.68e-07,1;UBERON:0005882,4.68e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.85650984403804,1.32521124570968,0.122490799214954,0.0958454710182364,0,3.30347642998166,2.42605942361857,3.84016333140609,0.659431438650969,0.274462930807229,1.04182674111352,6.70039197603314,5.06486349028512,1.98637722109853,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,4.94309110035915,1.37250180845588,1.88481528169297,0.173824320192276,0.255715457330331,2.28566849015516,0.811206315338788,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr1:33537358..33537375,- | |||
}} |
Latest revision as of 13:53, 5 August 2015
Short description: | p@chr1:33537358..33537375, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:33537358..33537375, - |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.04e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.04e-18 | 23 |
neuron of the substantia nigra | 1.06e-17 | 3 |
raphe nuclei neuron | 2.02e-17 | 3 |
neuron | 1.60e-12 | 33 |
neuronal stem cell | 1.60e-12 | 33 |
neuroblast | 1.60e-12 | 33 |
electrically signaling cell | 1.60e-12 | 33 |
neuron of the dorsal spinal cord | 1.06e-11 | 2 |
electrically responsive cell | 1.99e-10 | 39 |
electrically active cell | 1.99e-10 | 39 |
neural cell | 2.35e-09 | 43 |
ectodermal cell | 4.06e-09 | 44 |
neurectodermal cell | 4.06e-09 | 44 |