FFCP PHASE1:Mm9::chr3:106904496..106904503,+: Difference between revisions
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{{FFCP|EntrezGene=16490|HGNC=|MCL_coexpression_id=1|UniProt=P63141,B2RS05,Q3TZ64|association_with_transcript=11bp_to_ENSMUST00000038695,NM_008417,uc008qws.1_5end|description=CAGE_peak_7_at_Kcna2_5end|id=chr3:106904496..106904503,+|ontology_enrichment_celltype=CL:0000117!9.19e-15!23;CL:0000337!9.19e-15!23;CL:0000540!3.54e-11!33;CL:0000047!3.54e-11!33;CL:0000031!3.54e-11!33;CL:0000404!3.54e-11!33;CL:0002319!2.34e-09!43;CL:0000221!5.19e-09!44;CL:0000133!5.19e-09!44;CL:0000393!1.28e-08!39;CL:0000211!1.28e-08!39;CL:0000055!3.06e-07!50|ontology_enrichment_celltype_v019_2=CL:0002610,1.12e-13,3;CL:0002614,1.29e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.91e-34!73;UBERON:0005743!1.91e-34!73;UBERON:0000073!3.83e-33!75;UBERON:0001016!3.83e-33!75;UBERON:0001049!6.63e-31!52;UBERON:0005068!6.63e-31!52;UBERON:0006241!6.63e-31!52;UBERON:0007135!6.63e-31!52;UBERON:0000955!2.40e-29!50;UBERON:0006238!2.40e-29!50;UBERON:0002616!3.83e-28!49;UBERON:0000033!5.09e-25!63;UBERON:0004121!5.66e-24!102;UBERON:0000924!5.66e-24!102;UBERON:0006601!5.66e-24!102;UBERON:0002020!8.00e-24!34;UBERON:0002346!3.20e-23!71;UBERON:0003075!3.20e-23!71;UBERON:0007284!3.20e-23!71;UBERON:0003080!1.05e-20!40;UBERON:0002780!1.69e-19!39;UBERON:0001890!1.69e-19!39;UBERON:0006240!1.69e-19!39;UBERON:0003056!3.44e-19!49;UBERON:0002791!1.67e-18!29;UBERON:0003528!1.67e-18!29;UBERON:0001893!1.67e-18!29;UBERON:0007811!3.54e-17!86;UBERON:0000153!1.07e-14!94;UBERON:0002021!3.04e-14!10;UBERON:0000411!3.04e-14!10;UBERON:0001950!3.04e-14!10;UBERON:0000956!4.04e-14!21;UBERON:0001869!4.04e-14!21;UBERON:0000203!4.04e-14!21;UBERON:0003076!9.46e-11!12;UBERON:0003057!9.46e-11!12;UBERON:0000025!1.24e-10!114;UBERON:0002619!1.53e-10!17;UBERON:0002298!1.68e-09!6;UBERON:0004111!3.43e-09!122;UBERON:0002240!3.66e-08!6;UBERON:0005174!3.66e-08!6;UBERON:0001137!3.66e-08!6;UBERON:0002950!8.17e-07!4;UBERON:0001891!8.17e-07!4;UBERON:0009616!8.17e-07!4;UBERON:0001948!9.11e-07!5;UBERON:0002315!9.11e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-30,54;UBERON:0002616,1.91e-25,46;UBERON:0001049,4.67e-25,52;UBERON:0005068,4.67e-25,52;UBERON:0006241,4.67e-25,52;UBERON:0007135,4.67e-25,52;UBERON:0000955,7.66e-25,47;UBERON:0006238,7.66e-25,47;UBERON:0002021,1.72e-24,10;UBERON:0000411,1.72e-24,10;UBERON:0001950,1.72e-24,10;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0003528,5.31e-21,29;UBERON:0002791,5.31e-21,29;UBERON:0001893,5.31e-21,29;UBERON:0003080,6.85e-20,40;UBERON:0002346,8.73e-20,64;UBERON:0003075,8.73e-20,64;UBERON:0007284,8.73e-20,64;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002780,1.22e-17,39;UBERON:0001890,1.22e-17,39;UBERON:0006240,1.22e-17,39;UBERON:0002619,1.33e-17,17;UBERON:0002020,1.37e-17,34;UBERON:0000956,2.11e-17,21;UBERON:0001869,2.11e-17,21;UBERON:0000203,2.11e-17,21;UBERON:0010371,5.79e-17,73;UBERON:0002950,2.49e-16,4;UBERON:0001891,2.49e-16,4;UBERON:0009616,2.49e-16,4;UBERON:0010286,2.49e-16,4;UBERON:0003056,9.15e-16,49;UBERON:0004684,1.12e-13,3;UBERON:0002275,1.12e-13,3;UBERON:0010314,8.29e-13,92;UBERON:0002038,1.29e-12,3;UBERON:0009663,1.29e-12,3;UBERON:0009661,1.29e-12,3;UBERON:0000125,1.29e-12,3;UBERON:0002308,1.29e-12,3;UBERON:0000025,1.03e-09,114;UBERON:0001896,3.56e-09,2;UBERON:0002298,3.56e-09,2;UBERON:0005290,3.56e-09,2;UBERON:0010096,3.56e-09,2;UBERON:0004111,7.33e-09,122;UBERON:0011216,6.78e-07,194;UBERON:0004733,7.12e-07,6;UBERON:0004732,7.12e-07,6;UBERON:0002028,7.12e-07,6;UBERON:0007277,7.12e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0,0,0,2.20231761998777,3.57524546638526,2.76491759861238,0.131886287730194,0.0914876436024097,0,3.07101298901519,1.12552522006336,1.37518422999129,0.589257170947335,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,3.35114730901528,0,0,0,0,1.64769703345305,0.915001205637253,0,2.08589184230732,0.767146371990992,0.62336413367868,1.62241263067758,0,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,2.40825884981688,1.52375192569864,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1689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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16490 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63141,uniprot:B2RS05,uniprot:Q3TZ64 | |||
|association_with_transcript=11bp_to_ENSMUST00000038695,NM_008417,uc008qws.1_5end | |||
|cluster_id=chr3:106904496..106904503,+ | |||
|description=CAGE_peak_7_at_Kcna2_5end | |||
|id=chr3:106904496..106904503,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.19e-15!23;CL:0000337!9.19e-15!23;CL:0000540!3.54e-11!33;CL:0000047!3.54e-11!33;CL:0000031!3.54e-11!33;CL:0000404!3.54e-11!33;CL:0002319!2.34e-09!43;CL:0000221!5.19e-09!44;CL:0000133!5.19e-09!44;CL:0000393!1.28e-08!39;CL:0000211!1.28e-08!39;CL:0000055!3.06e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.12e-13,3;CL:0002614,1.29e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.91e-34!73;UBERON:0005743!1.91e-34!73;UBERON:0000073!3.83e-33!75;UBERON:0001016!3.83e-33!75;UBERON:0001049!6.63e-31!52;UBERON:0005068!6.63e-31!52;UBERON:0006241!6.63e-31!52;UBERON:0007135!6.63e-31!52;UBERON:0000955!2.40e-29!50;UBERON:0006238!2.40e-29!50;UBERON:0002616!3.83e-28!49;UBERON:0000033!5.09e-25!63;UBERON:0004121!5.66e-24!102;UBERON:0000924!5.66e-24!102;UBERON:0006601!5.66e-24!102;UBERON:0002020!8.00e-24!34;UBERON:0002346!3.20e-23!71;UBERON:0003075!3.20e-23!71;UBERON:0007284!3.20e-23!71;UBERON:0003080!1.05e-20!40;UBERON:0002780!1.69e-19!39;UBERON:0001890!1.69e-19!39;UBERON:0006240!1.69e-19!39;UBERON:0003056!3.44e-19!49;UBERON:0002791!1.67e-18!29;UBERON:0003528!1.67e-18!29;UBERON:0001893!1.67e-18!29;UBERON:0007811!3.54e-17!86;UBERON:0000153!1.07e-14!94;UBERON:0002021!3.04e-14!10;UBERON:0000411!3.04e-14!10;UBERON:0001950!3.04e-14!10;UBERON:0000956!4.04e-14!21;UBERON:0001869!4.04e-14!21;UBERON:0000203!4.04e-14!21;UBERON:0003076!9.46e-11!12;UBERON:0003057!9.46e-11!12;UBERON:0000025!1.24e-10!114;UBERON:0002619!1.53e-10!17;UBERON:0002298!1.68e-09!6;UBERON:0004111!3.43e-09!122;UBERON:0002240!3.66e-08!6;UBERON:0005174!3.66e-08!6;UBERON:0001137!3.66e-08!6;UBERON:0002950!8.17e-07!4;UBERON:0001891!8.17e-07!4;UBERON:0009616!8.17e-07!4;UBERON:0001948!9.11e-07!5;UBERON:0002315!9.11e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-30,54;UBERON:0002616,1.91e-25,46;UBERON:0001049,4.67e-25,52;UBERON:0005068,4.67e-25,52;UBERON:0006241,4.67e-25,52;UBERON:0007135,4.67e-25,52;UBERON:0000955,7.66e-25,47;UBERON:0006238,7.66e-25,47;UBERON:0002021,1.72e-24,10;UBERON:0000411,1.72e-24,10;UBERON:0001950,1.72e-24,10;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0003528,5.31e-21,29;UBERON:0002791,5.31e-21,29;UBERON:0001893,5.31e-21,29;UBERON:0003080,6.85e-20,40;UBERON:0002346,8.73e-20,64;UBERON:0003075,8.73e-20,64;UBERON:0007284,8.73e-20,64;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002780,1.22e-17,39;UBERON:0001890,1.22e-17,39;UBERON:0006240,1.22e-17,39;UBERON:0002619,1.33e-17,17;UBERON:0002020,1.37e-17,34;UBERON:0000956,2.11e-17,21;UBERON:0001869,2.11e-17,21;UBERON:0000203,2.11e-17,21;UBERON:0010371,5.79e-17,73;UBERON:0002950,2.49e-16,4;UBERON:0001891,2.49e-16,4;UBERON:0009616,2.49e-16,4;UBERON:0010286,2.49e-16,4;UBERON:0003056,9.15e-16,49;UBERON:0004684,1.12e-13,3;UBERON:0002275,1.12e-13,3;UBERON:0010314,8.29e-13,92;UBERON:0002038,1.29e-12,3;UBERON:0009663,1.29e-12,3;UBERON:0009661,1.29e-12,3;UBERON:0000125,1.29e-12,3;UBERON:0002308,1.29e-12,3;UBERON:0000025,1.03e-09,114;UBERON:0001896,3.56e-09,2;UBERON:0002298,3.56e-09,2;UBERON:0005290,3.56e-09,2;UBERON:0010096,3.56e-09,2;UBERON:0004111,7.33e-09,122;UBERON:0011216,6.78e-07,194;UBERON:0004733,7.12e-07,6;UBERON:0004732,7.12e-07,6;UBERON:0002028,7.12e-07,6;UBERON:0007277,7.12e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0,0,0,2.20231761998777,3.57524546638526,2.76491759861238,0.131886287730194,0.0914876436024097,0,3.07101298901519,1.12552522006336,1.37518422999129,0.589257170947335,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,3.35114730901528,0,0,0,0,1.64769703345305,0.915001205637253,0,2.08589184230732,0.767146371990992,0.62336413367868,1.62241263067758,0,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,2.40825884981688,1.52375192569864,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.14579102687879,1.54667864109319,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,2.26571204492102,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p7@Kcna2 | |||
}} |
Revision as of 19:58, 5 August 2015
Short description: | p7@Kcna2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Kcna2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000038695, NM_008417, uc008qws.1_5end |
EntrezGene: | 16490 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.12e-13 | 3 |
neuron of the substantia nigra | 1.29e-12 | 3 |