FFCP PHASE1:Hg19::chr8:53166916..53166925,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18695 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000521119_5end | |||
|coexpression_cluster_id=C1478 | |||
|description=CAGE_peak_10_at_ST18_5end | |||
|id=chr8:53166916..53166925,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.85e-14;6!CL:0000404;1.85e-14;6!CL:0002553;3.41e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.89e-14,6;CL:0000031,1.89e-14,6;CL:0000404,1.89e-14,6;CL:0002553,3.41e-11,1;CL:0000047,5.55e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.87e-30;3!CL:0000031;1.85e-14;6 | |||
|ontology_enrichment_disease=DOID:3119!5.02e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.76e-08;5!DOID:3119;7.87e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.60e-08,5;DOID:3119,8.03e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005743!3.37e-27!86;UBERON:0001017!1.38e-26!82;UBERON:0000073!4.96e-24!94;UBERON:0001016!4.96e-24!94;UBERON:0001049!5.20e-24!57;UBERON:0005068!5.20e-24!57;UBERON:0006241!5.20e-24!57;UBERON:0007135!5.20e-24!57;UBERON:0002616!9.53e-21!59;UBERON:0000955!1.27e-20!69;UBERON:0006238!1.27e-20!69;UBERON:0003075!2.62e-19!86;UBERON:0007284!2.62e-19!86;UBERON:0002346!3.36e-18!90;UBERON:0002780!5.87e-17!41;UBERON:0001890!5.87e-17!41;UBERON:0006240!5.87e-17!41;UBERON:0003296!6.82e-17!4;UBERON:0010133!6.82e-17!4;UBERON:0003080!1.76e-16!42;UBERON:0001894!2.24e-14!7;UBERON:0006222!2.24e-14!7;UBERON:0003056!1.30e-13!61;UBERON:0000153!3.53e-13!129;UBERON:0007811!3.53e-13!129;UBERON:0004121!9.60e-13!169;UBERON:0000924!2.70e-12!173;UBERON:0006601!2.70e-12!173;UBERON:0007023!8.51e-12!115;UBERON:0000033!1.19e-11!123;UBERON:0001905!2.03e-09!2;UBERON:0002757!2.03e-09!2;UBERON:0010134!2.03e-09!2;UBERON:0002784!2.03e-09!2;UBERON:0005408!2.03e-09!2;UBERON:0001899!2.03e-09!2;UBERON:0002619!3.23e-09!22;UBERON:0000007!3.43e-09!2;UBERON:0002791!4.98e-09!33;UBERON:0003076!7.49e-09!15;UBERON:0003057!7.49e-09!15;UBERON:0001954!7.57e-09!2;UBERON:0003022!7.57e-09!2;UBERON:0002421!7.57e-09!2;UBERON:0002600!7.57e-09!2;UBERON:0001893!1.02e-08!34;UBERON:0004733!4.37e-08!12;UBERON:0002028!4.37e-08!12;UBERON:0007277!4.37e-08!12;UBERON:0000956!5.23e-08!25;UBERON:0000203!5.23e-08!25;UBERON:0001869!1.32e-07!32;UBERON:0004732!1.95e-07!13;UBERON:0002020!4.39e-07!34;UBERON:0003528!4.39e-07!34;UBERON:0002037!7.45e-07!6;UBERON:0006215!7.45e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.33e-38;4!UBERON:0010133;2.33e-38;4!UBERON:0001894;4.44e-22;7!UBERON:0001905;2.15e-20;2!UBERON:0002757;2.15e-20;2!UBERON:0010134;2.15e-20;2!UBERON:0005408;2.15e-20;2!UBERON:0001899;2.15e-20;2!UBERON:0000007;8.31e-20;2!UBERON:0002037;3.06e-15;6!UBERON:0002784;1.13e-10;4!UBERON:0002680;2.41e-10;9!UBERON:0001895;2.41e-10;9!UBERON:0000073;1.01e-08;53!UBERON:0002616;1.01e-08;53!UBERON:0004733;7.04e-08;12!UBERON:0002028;7.04e-08;12!UBERON:0004732;2.62e-07;13!UBERON:0000002;3.30e-07;6!UBERON:0001560;3.30e-07;6!UBERON:0000955;4.06e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.33e-38,4;UBERON:0010133,2.33e-38,4;UBERON:0001894,4.44e-22,7;UBERON:0006222,4.44e-22,7;UBERON:0001905,2.26e-20,2;UBERON:0002757,2.26e-20,2;UBERON:0010134,2.26e-20,2;UBERON:0005408,2.26e-20,2;UBERON:0001899,2.26e-20,2;UBERON:0000007,7.92e-20,2;UBERON:0002037,3.13e-15,6;UBERON:0006215,3.13e-15,6;UBERON:0001017,1.72e-14,81;UBERON:0000073,4.66e-13,53;UBERON:0002616,4.66e-13,53;UBERON:0001016,6.87e-13,89;UBERON:0001049,2.63e-12,56;UBERON:0005068,2.63e-12,56;UBERON:0006241,2.63e-12,56;UBERON:0007135,2.63e-12,56;UBERON:0002784,1.15e-10,4;UBERON:0002680,2.45e-10,9;UBERON:0001895,2.45e-10,9;UBERON:0010092,2.45e-10,9;UBERON:0000955,8.58e-10,68;UBERON:0006238,8.58e-10,68;UBERON:0003075,4.59e-08,82;UBERON:0007284,4.59e-08,82;UBERON:0004733,7.12e-08,12;UBERON:0002028,7.12e-08,12;UBERON:0007277,7.12e-08,12;UBERON:0002780,1.14e-07,41;UBERON:0001890,1.14e-07,41;UBERON:0003080,1.14e-07,41;UBERON:0006240,1.14e-07,41;UBERON:0002346,1.23e-07,86;UBERON:0010371,1.33e-07,104;UBERON:0004732,2.65e-07,13;UBERON:0000002,3.05e-07,6;UBERON:0001560,3.05e-07,6;UBERON:0004121,4.32e-07,171;UBERON:0000924,4.32e-07,171;UBERON:0006601,4.32e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,1.00509759200609,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,3.77899121781414,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.583209226766509,2.2571249341328,0,0.120596438625408,6.10326945268333,13.3800904516782,5.31985714116385,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0.138348634936231,0,0,0,0,0,4.92731497276806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0.205116364240755,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,6.96412386641773,5.04425583328236,2.42786241694653,3.41493287026946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80727356154527,19.2982251906527,0,0,0.549702583727146,5.58562521196692,0.0771741581079447,0.218559560503957,16.9314226690148,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@ST18 | |||
}} |
Revision as of 22:00, 22 January 2014
Short description: | p10@ST18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ST18_5end |
Coexpression cluster: | C1478_nonsmall_smallcell_small_pineal_cerebellum_argyrophil_gastrointestinal |
Association with transcript: | -8bp_to_ENST00000521119_5end |
EntrezGene: | ST18 |
HGNC: | 18695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.89e-14 | 6 |
neuroblast | 1.89e-14 | 6 |
electrically signaling cell | 1.89e-14 | 6 |
lung fibroblast | 3.41e-11 | 1 |
neuronal stem cell | 5.55e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.60e-08 | 5 |
gastrointestinal system cancer | 8.03e-07 | 14 |