FFCP PHASE1:Mm9::chr5:5265790..5265806,-: Difference between revisions
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{{FFCP|EntrezGene=18647|HGNC=|MCL_coexpression_id=1|UniProt=D6RHB2|association_with_transcript=-114bp_to_ENSMUST00000155747_5end|description=CAGE_peak_7_at_Cdk14_5end|id=chr5:5265790..5265806,-|ontology_enrichment_celltype=CL:0000117!3.68e-14!23;CL:0000337!3.68e-14!23;CL:0000540!3.27e-10!33;CL:0000047!3.27e-10!33;CL:0000031!3.27e-10!33;CL:0000404!3.27e-10!33;CL:0000393!1.17e-08!39;CL:0000211!1.17e-08!39;CL:0002319!1.03e-07!43;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-15,23;CL:0000337,4.94e-15,23;CL:0000540,1.76e-09,33;CL:0000047,1.76e-09,33;CL:0000031,1.76e-09,33;CL:0000404,1.76e-09,33;CL:0000393,1.55e-07,39;CL:0000211,1.55e-07,39;CL:0002614,1.66e-07,3;CL:0002612,5.33e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.26e-25!102;UBERON:0000924!2.26e-25!102;UBERON:0006601!2.26e-25!102;UBERON:0002346!4.88e-23!71;UBERON:0003075!4.88e-23!71;UBERON:0007284!4.88e-23!71;UBERON:0002020!3.86e-22!34;UBERON:0000073!8.16e-21!75;UBERON:0001016!8.16e-21!75;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0001017!2.21e-20!73;UBERON:0005743!2.21e-20!73;UBERON:0000033!1.43e-18!63;UBERON:0002791!6.94e-18!29;UBERON:0003528!6.94e-18!29;UBERON:0001893!6.94e-18!29;UBERON:0003056!6.95e-18!49;UBERON:0000955!7.71e-18!50;UBERON:0006238!7.71e-18!50;UBERON:0002616!4.42e-17!49;UBERON:0003080!6.73e-15!40;UBERON:0002780!3.91e-14!39;UBERON:0001890!3.91e-14!39;UBERON:0006240!3.91e-14!39;UBERON:0000956!6.16e-12!21;UBERON:0001869!6.16e-12!21;UBERON:0000203!6.16e-12!21;UBERON:0002619!1.89e-11!17;UBERON:0002021!1.14e-10!10;UBERON:0000411!1.14e-10!10;UBERON:0001950!1.14e-10!10;UBERON:0007811!2.11e-09!86;UBERON:0000153!2.02e-07!94;UBERON:0002420!2.78e-07!8;UBERON:0007245!2.78e-07!8;UBERON:0010009!2.78e-07!8;UBERON:0010011!2.78e-07!8;UBERON:0000454!2.78e-07!8;UBERON:0000025!5.30e-07!114;UBERON:0002298!7.49e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.08e-31,64;UBERON:0003075,1.08e-31,64;UBERON:0007284,1.08e-31,64;UBERON:0000073,1.29e-30,54;UBERON:0001049,2.94e-29,52;UBERON:0005068,2.94e-29,52;UBERON:0006241,2.94e-29,52;UBERON:0007135,2.94e-29,52;UBERON:0002020,3.02e-29,34;UBERON:0001017,1.43e-27,73;UBERON:0010371,8.60e-27,73;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0001016,1.28e-26,75;UBERON:0003056,1.13e-23,49;UBERON:0002021,9.49e-22,10;UBERON:0000411,9.49e-22,10;UBERON:0001950,9.49e-22,10;UBERON:0000955,1.01e-21,47;UBERON:0006238,1.01e-21,47;UBERON:0003528,5.79e-21,29;UBERON:0002791,5.79e-21,29;UBERON:0001893,5.79e-21,29;UBERON:0002616,2.51e-20,46;UBERON:0003080,1.25e-19,40;UBERON:0010314,1.35e-19,92;UBERON:0002780,3.41e-18,39;UBERON:0001890,3.41e-18,39;UBERON:0006240,3.41e-18,39;UBERON:0002619,1.91e-14,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0002240,4.43e-12,6;UBERON:0005174,4.43e-12,6;UBERON:0001137,4.43e-12,6;UBERON:0001948,1.96e-10,5;UBERON:0002315,1.96e-10,5;UBERON:0003076,3.07e-10,12;UBERON:0003057,3.07e-10,12;UBERON:0000025,1.91e-09,114;UBERON:0002950,2.74e-09,4;UBERON:0001891,2.74e-09,4;UBERON:0009616,2.74e-09,4;UBERON:0010286,2.74e-09,4;UBERON:0002420,6.64e-09,8;UBERON:0007245,6.64e-09,8;UBERON:0010009,6.64e-09,8;UBERON:0010011,6.64e-09,8;UBERON:0000454,6.64e-09,8;UBERON:0004111,2.26e-08,122;UBERON:0002038,1.66e-07,3;UBERON:0009663,1.66e-07,3;UBERON:0009661,1.66e-07,3;UBERON:0000125,1.66e-07,3;UBERON:0002308,1.66e-07,3;UBERON:0002257,5.33e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,6.28432165688368,5.07997644188711,0.734944795289724,0.958454710182364,0.919218786610021,0,13.7902325132003,9.83081812839958,0.791317726381163,1.64677758484337,3.12548022334056,10.8881369610539,6.75315132038016,10.0846843532695,5.30331453852602,11.8168495063255,3.16879057903011,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.60289056221049,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,6.5907881338122,2.28750301409313,0.502617408451458,8.69121600961382,8.18289463457058,5.81806524766768,7.62533936418461,0,0,0.252722758433675,1.47309299120532,0,0,0.180062129805349,1.80845781402858,1.49680298132921,1.2811372028485,0.937017245597288,4.39795730256327,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.134206418760372,9.67333763394985,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,7.22477654945064,12.6588621519579,0,0,0,0,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,5.46246237917072,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,4.82105785227325,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,7.90652579663893,8.28585425712918,8.02053718815155,5.67115501734169,11.6464028361009,11.3309084608455,9.45031500324528,13.0593148935024,12.2348450425735,12.4262474820437,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.655490552289177,1.40855335290712,0.746661096422973,0,0.579421629724277,1.15745532278223,0,0.294397840268795,1.37147700954166,0.532427418478012,0.953744759789284,0.872078499793971,0.941093804153306,0.592302255241736,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0,0.619747364743864,0,0.249810577937946,0,0,0.382576664137687,0,0|short_description=p7@Cdk14}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18647 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6RHB2 | |||
|association_with_transcript=-114bp_to_ENSMUST00000155747_5end | |||
|cluster_id=chr5:5265790..5265806,- | |||
|description=CAGE_peak_7_at_Cdk14_5end | |||
|id=chr5:5265790..5265806,- | |||
|ontology_enrichment_celltype=CL:0000117!3.68e-14!23;CL:0000337!3.68e-14!23;CL:0000540!3.27e-10!33;CL:0000047!3.27e-10!33;CL:0000031!3.27e-10!33;CL:0000404!3.27e-10!33;CL:0000393!1.17e-08!39;CL:0000211!1.17e-08!39;CL:0002319!1.03e-07!43;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-15,23;CL:0000337,4.94e-15,23;CL:0000540,1.76e-09,33;CL:0000047,1.76e-09,33;CL:0000031,1.76e-09,33;CL:0000404,1.76e-09,33;CL:0000393,1.55e-07,39;CL:0000211,1.55e-07,39;CL:0002614,1.66e-07,3;CL:0002612,5.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.26e-25!102;UBERON:0000924!2.26e-25!102;UBERON:0006601!2.26e-25!102;UBERON:0002346!4.88e-23!71;UBERON:0003075!4.88e-23!71;UBERON:0007284!4.88e-23!71;UBERON:0002020!3.86e-22!34;UBERON:0000073!8.16e-21!75;UBERON:0001016!8.16e-21!75;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0001017!2.21e-20!73;UBERON:0005743!2.21e-20!73;UBERON:0000033!1.43e-18!63;UBERON:0002791!6.94e-18!29;UBERON:0003528!6.94e-18!29;UBERON:0001893!6.94e-18!29;UBERON:0003056!6.95e-18!49;UBERON:0000955!7.71e-18!50;UBERON:0006238!7.71e-18!50;UBERON:0002616!4.42e-17!49;UBERON:0003080!6.73e-15!40;UBERON:0002780!3.91e-14!39;UBERON:0001890!3.91e-14!39;UBERON:0006240!3.91e-14!39;UBERON:0000956!6.16e-12!21;UBERON:0001869!6.16e-12!21;UBERON:0000203!6.16e-12!21;UBERON:0002619!1.89e-11!17;UBERON:0002021!1.14e-10!10;UBERON:0000411!1.14e-10!10;UBERON:0001950!1.14e-10!10;UBERON:0007811!2.11e-09!86;UBERON:0000153!2.02e-07!94;UBERON:0002420!2.78e-07!8;UBERON:0007245!2.78e-07!8;UBERON:0010009!2.78e-07!8;UBERON:0010011!2.78e-07!8;UBERON:0000454!2.78e-07!8;UBERON:0000025!5.30e-07!114;UBERON:0002298!7.49e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.08e-31,64;UBERON:0003075,1.08e-31,64;UBERON:0007284,1.08e-31,64;UBERON:0000073,1.29e-30,54;UBERON:0001049,2.94e-29,52;UBERON:0005068,2.94e-29,52;UBERON:0006241,2.94e-29,52;UBERON:0007135,2.94e-29,52;UBERON:0002020,3.02e-29,34;UBERON:0001017,1.43e-27,73;UBERON:0010371,8.60e-27,73;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0001016,1.28e-26,75;UBERON:0003056,1.13e-23,49;UBERON:0002021,9.49e-22,10;UBERON:0000411,9.49e-22,10;UBERON:0001950,9.49e-22,10;UBERON:0000955,1.01e-21,47;UBERON:0006238,1.01e-21,47;UBERON:0003528,5.79e-21,29;UBERON:0002791,5.79e-21,29;UBERON:0001893,5.79e-21,29;UBERON:0002616,2.51e-20,46;UBERON:0003080,1.25e-19,40;UBERON:0010314,1.35e-19,92;UBERON:0002780,3.41e-18,39;UBERON:0001890,3.41e-18,39;UBERON:0006240,3.41e-18,39;UBERON:0002619,1.91e-14,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0002240,4.43e-12,6;UBERON:0005174,4.43e-12,6;UBERON:0001137,4.43e-12,6;UBERON:0001948,1.96e-10,5;UBERON:0002315,1.96e-10,5;UBERON:0003076,3.07e-10,12;UBERON:0003057,3.07e-10,12;UBERON:0000025,1.91e-09,114;UBERON:0002950,2.74e-09,4;UBERON:0001891,2.74e-09,4;UBERON:0009616,2.74e-09,4;UBERON:0010286,2.74e-09,4;UBERON:0002420,6.64e-09,8;UBERON:0007245,6.64e-09,8;UBERON:0010009,6.64e-09,8;UBERON:0010011,6.64e-09,8;UBERON:0000454,6.64e-09,8;UBERON:0004111,2.26e-08,122;UBERON:0002038,1.66e-07,3;UBERON:0009663,1.66e-07,3;UBERON:0009661,1.66e-07,3;UBERON:0000125,1.66e-07,3;UBERON:0002308,1.66e-07,3;UBERON:0002257,5.33e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,6.28432165688368,5.07997644188711,0.734944795289724,0.958454710182364,0.919218786610021,0,13.7902325132003,9.83081812839958,0.791317726381163,1.64677758484337,3.12548022334056,10.8881369610539,6.75315132038016,10.0846843532695,5.30331453852602,11.8168495063255,3.16879057903011,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.60289056221049,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,6.5907881338122,2.28750301409313,0.502617408451458,8.69121600961382,8.18289463457058,5.81806524766768,7.62533936418461,0,0,0.252722758433675,1.47309299120532,0,0,0.180062129805349,1.80845781402858,1.49680298132921,1.2811372028485,0.937017245597288,4.39795730256327,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.134206418760372,9.67333763394985,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,7.22477654945064,12.6588621519579,0,0,0,0,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,5.46246237917072,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,4.82105785227325,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,7.90652579663893,8.28585425712918,8.02053718815155,5.67115501734169,11.6464028361009,11.3309084608455,9.45031500324528,13.0593148935024,12.2348450425735,12.4262474820437,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.655490552289177,1.40855335290712,0.746661096422973,0,0.579421629724277,1.15745532278223,0,0.294397840268795,1.37147700954166,0.532427418478012,0.953744759789284,0.872078499793971,0.941093804153306,0.592302255241736,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0,0.619747364743864,0,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p7@Cdk14 | |||
}} |
Revision as of 11:03, 4 August 2015
Short description: | p7@Cdk14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cdk14_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -114bp_to_ENSMUST00000155747_5end |
EntrezGene: | 18647 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.94e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.94e-15 | 23 |
neuron | 1.76e-09 | 33 |
neuronal stem cell | 1.76e-09 | 33 |
neuroblast | 1.76e-09 | 33 |
electrically signaling cell | 1.76e-09 | 33 |
electrically responsive cell | 1.55e-07 | 39 |
electrically active cell | 1.55e-07 | 39 |
neuron of the substantia nigra | 1.66e-07 | 3 |
neuron of the ventral spinal cord | 5.33e-07 | 3 |