FFCP PHASE1:Hg19::chr4:109089901..109089930,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!1.08e-12!18;CL:0000789!1.08e-12!18;CL:0002420!1.08e-12!18;CL:0002419!1.08e-12!18;CL:0000790!1.08e-12!18;CL:0000542!3.65e-12!53;CL:0000051!3.65e-12!53;CL:0000084!5.77e-12!25;CL:0000827!5.77e-12!25;CL:0000838!1.35e-11!52;CL:0000625!1.72e-09!11 | |ontology_enrichment_celltype=CL:0000791!1.08e-12!18;CL:0000789!1.08e-12!18;CL:0002420!1.08e-12!18;CL:0002419!1.08e-12!18;CL:0000790!1.08e-12!18;CL:0000542!3.65e-12!53;CL:0000051!3.65e-12!53;CL:0000084!5.77e-12!25;CL:0000827!5.77e-12!25;CL:0000838!1.35e-11!52;CL:0000625!1.72e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.54e-19;18!CL:0000789;5.54e-19;18!CL:0002419;5.54e-19;18!CL:0000084;7.23e-18;25!CL:0000625;1.14e-13;11!CL:0000624;2.00e-08;6!CL:0000542;7.22e-07;53 | |ontology_enrichment_celltype_v019=CL:0000791;5.54e-19;18!CL:0000789;5.54e-19;18!CL:0002419;5.54e-19;18!CL:0000084;7.23e-18;25!CL:0000625;1.14e-13;11!CL:0000624;2.00e-08;6!CL:0000542;7.22e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.03e-19,18;CL:0000789,6.03e-19,18;CL:0002420,6.03e-19,18;CL:0002419,6.03e-19,18;CL:0000790,6.03e-19,18;CL:0000084,7.76e-18,25;CL:0000827,7.76e-18,25;CL:0000625,1.20e-13,11;CL:0000542,4.57e-13,53;CL:0000051,4.57e-13,53;CL:0000838,2.67e-12,52;CL:0000624,2.07e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.54e-19;18!CL:0000051;7.22e-07;53 | |ontology_enrichment_development_v019=CL:0000790;5.54e-19;18!CL:0000051;7.22e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:1036,9.55e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-22!115;UBERON:0001049!3.33e-14!57;UBERON:0005068!3.33e-14!57;UBERON:0006241!3.33e-14!57;UBERON:0007135!3.33e-14!57;UBERON:0001017!5.08e-12!82;UBERON:0002616!1.44e-11!59;UBERON:0000955!1.61e-11!69;UBERON:0006238!1.61e-11!69;UBERON:0005743!3.61e-11!86;UBERON:0000178!6.50e-11!15;UBERON:0000179!6.50e-11!15;UBERON:0000463!6.50e-11!15;UBERON:0003080!2.16e-10!42;UBERON:0002780!3.65e-10!41;UBERON:0001890!3.65e-10!41;UBERON:0006240!3.65e-10!41;UBERON:0000073!6.57e-10!94;UBERON:0001016!6.57e-10!94;UBERON:0000153!1.45e-08!129;UBERON:0007811!1.45e-08!129;UBERON:0003075!1.59e-08!86;UBERON:0007284!1.59e-08!86;UBERON:0001893!2.01e-08!34;UBERON:0002020!3.60e-08!34;UBERON:0003528!3.60e-08!34;UBERON:0002791!5.78e-08!33;UBERON:0001869!1.11e-07!32;UBERON:0002346!1.96e-07!90;UBERON:0000033!3.07e-07!123;UBERON:0001950!8.77e-07!20;UBERON:0003056!9.88e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.16e-22!115;UBERON:0001049!3.33e-14!57;UBERON:0005068!3.33e-14!57;UBERON:0006241!3.33e-14!57;UBERON:0007135!3.33e-14!57;UBERON:0001017!5.08e-12!82;UBERON:0002616!1.44e-11!59;UBERON:0000955!1.61e-11!69;UBERON:0006238!1.61e-11!69;UBERON:0005743!3.61e-11!86;UBERON:0000178!6.50e-11!15;UBERON:0000179!6.50e-11!15;UBERON:0000463!6.50e-11!15;UBERON:0003080!2.16e-10!42;UBERON:0002780!3.65e-10!41;UBERON:0001890!3.65e-10!41;UBERON:0006240!3.65e-10!41;UBERON:0000073!6.57e-10!94;UBERON:0001016!6.57e-10!94;UBERON:0000153!1.45e-08!129;UBERON:0007811!1.45e-08!129;UBERON:0003075!1.59e-08!86;UBERON:0007284!1.59e-08!86;UBERON:0001893!2.01e-08!34;UBERON:0002020!3.60e-08!34;UBERON:0003528!3.60e-08!34;UBERON:0002791!5.78e-08!33;UBERON:0001869!1.11e-07!32;UBERON:0002346!1.96e-07!90;UBERON:0000033!3.07e-07!123;UBERON:0001950!8.77e-07!20;UBERON:0003056!9.88e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.45e-16;15!UBERON:0000179;8.45e-16;15!UBERON:0000463;8.45e-16;15!UBERON:0002390;7.69e-11;32!UBERON:0000073;1.50e-08;53!UBERON:0002616;1.50e-08;53!UBERON:0001950;2.42e-08;20!UBERON:0002619;2.63e-08;22!UBERON:0002780;4.21e-08;41!UBERON:0001890;4.21e-08;41!UBERON:0001869;7.01e-07;32!UBERON:0001893;7.05e-07;34!UBERON:0000956;7.21e-07;25!UBERON:0000203;7.21e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.45e-16;15!UBERON:0000179;8.45e-16;15!UBERON:0000463;8.45e-16;15!UBERON:0002390;7.69e-11;32!UBERON:0000073;1.50e-08;53!UBERON:0002616;1.50e-08;53!UBERON:0001950;2.42e-08;20!UBERON:0002619;2.63e-08;22!UBERON:0002780;4.21e-08;41!UBERON:0001890;4.21e-08;41!UBERON:0001869;7.01e-07;32!UBERON:0001893;7.05e-07;34!UBERON:0000956;7.21e-07;25!UBERON:0000203;7.21e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-18,114;UBERON:0000178,8.24e-16,15;UBERON:0000179,8.24e-16,15;UBERON:0000463,8.24e-16,15;UBERON:0001049,1.77e-15,56;UBERON:0005068,1.77e-15,56;UBERON:0006241,1.77e-15,56;UBERON:0007135,1.77e-15,56;UBERON:0000073,1.12e-13,53;UBERON:0002616,1.12e-13,53;UBERON:0001017,3.97e-12,81;UBERON:0000955,9.95e-11,68;UBERON:0006238,9.95e-11,68;UBERON:0001016,1.59e-10,89;UBERON:0002780,3.49e-10,41;UBERON:0001890,3.49e-10,41;UBERON:0003080,3.49e-10,41;UBERON:0006240,3.49e-10,41;UBERON:0002619,1.94e-08,22;UBERON:0001950,2.10e-08,20;UBERON:0001893,3.66e-08,34;UBERON:0003075,4.15e-08,82;UBERON:0007284,4.15e-08,82;UBERON:0001869,6.46e-08,32;UBERON:0003528,7.45e-08,34;UBERON:0002020,7.45e-08,34;UBERON:0002346,2.64e-07,86;UBERON:0010371,5.25e-07,104;UBERON:0000956,5.58e-07,25;UBERON:0000203,5.58e-07,25;UBERON:0002791,6.08e-07,32;UBERON:0003076,7.52e-07,15;UBERON:0003057,7.52e-07,15 | |||
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| ||
|short_description=p3@LEF1 | |short_description=p3@LEF1 | ||
}} | }} |
Revision as of 03:42, 20 November 2012
Short description: | p3@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LEF1_5end |
Coexpression cluster: | C1082_acute_CD4_thymus_small_non_chronic_lymphangiectasia |
Association with transcript: | 181bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.03e-19 | 18 |
alpha-beta T cell | 6.03e-19 | 18 |
immature T cell | 6.03e-19 | 18 |
mature T cell | 6.03e-19 | 18 |
immature alpha-beta T cell | 6.03e-19 | 18 |
T cell | 7.76e-18 | 25 |
pro-T cell | 7.76e-18 | 25 |
CD8-positive, alpha-beta T cell | 1.20e-13 | 11 |
lymphocyte | 4.57e-13 | 53 |
common lymphoid progenitor | 4.57e-13 | 53 |
lymphoid lineage restricted progenitor cell | 2.67e-12 | 52 |
CD4-positive, alpha-beta T cell | 2.07e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-18 | 114 |
blood | 8.24e-16 | 15 |
haemolymphatic fluid | 8.24e-16 | 15 |
organism substance | 8.24e-16 | 15 |
neural tube | 1.77e-15 | 56 |
neural rod | 1.77e-15 | 56 |
future spinal cord | 1.77e-15 | 56 |
neural keel | 1.77e-15 | 56 |
regional part of nervous system | 1.12e-13 | 53 |
regional part of brain | 1.12e-13 | 53 |
central nervous system | 3.97e-12 | 81 |
brain | 9.95e-11 | 68 |
future brain | 9.95e-11 | 68 |
nervous system | 1.59e-10 | 89 |
regional part of forebrain | 3.49e-10 | 41 |
forebrain | 3.49e-10 | 41 |
anterior neural tube | 3.49e-10 | 41 |
future forebrain | 3.49e-10 | 41 |
regional part of cerebral cortex | 1.94e-08 | 22 |
neocortex | 2.10e-08 | 20 |
telencephalon | 3.66e-08 | 34 |
neural plate | 4.15e-08 | 82 |
presumptive neural plate | 4.15e-08 | 82 |
cerebral hemisphere | 6.46e-08 | 32 |
brain grey matter | 7.45e-08 | 34 |
gray matter | 7.45e-08 | 34 |
neurectoderm | 2.64e-07 | 86 |
ecto-epithelium | 5.25e-07 | 104 |
cerebral cortex | 5.58e-07 | 25 |
pallium | 5.58e-07 | 25 |
regional part of telencephalon | 6.08e-07 | 32 |
posterior neural tube | 7.52e-07 | 15 |
chordal neural plate | 7.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.55e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.