FFCP PHASE1:Hg19::chr10:123355631..123355643,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:123355631..123355643,-|id=chr10:123355631..123355643,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0006215;3.27e-23;3!UBERON:0003056;3.27e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.34e-61!57;UBERON:0005068!1.34e-61!57;UBERON:0006241!1.34e-61!57;UBERON:0007135!1.34e-61!57;UBERON:0005743!9.02e-48!86;UBERON:0001017!6.30e-47!82;UBERON:0002616!1.42e-46!59;UBERON:0000073!5.70e-46!94;UBERON:0001016!5.70e-46!94;UBERON:0003075!3.63e-45!86;UBERON:0007284!3.63e-45!86;UBERON:0002346!6.77e-43!90;UBERON:0000955!9.61e-42!69;UBERON:0006238!9.61e-42!69;UBERON:0003076!3.97e-39!15;UBERON:0003057!3.97e-39!15;UBERON:0007023!1.68e-37!115;UBERON:0001893!5.78e-37!34;UBERON:0001869!1.34e-34!32;UBERON:0002791!1.29e-33!33;UBERON:0002020!1.53e-32!34;UBERON:0003528!1.53e-32!34;UBERON:0004732!8.24e-31!13;UBERON:0002780!3.71e-30!41;UBERON:0001890!3.71e-30!41;UBERON:0006240!3.71e-30!41;UBERON:0003080!2.30e-29!42;UBERON:0000153!1.16e-27!129;UBERON:0007811!1.16e-27!129;UBERON:0000033!4.05e-27!123;UBERON:0004733!2.21e-26!12;UBERON:0002028!2.21e-26!12;UBERON:0007277!2.21e-26!12;UBERON:0004121!1.12e-24!169;UBERON:0000924!5.85e-24!173;UBERON:0006601!5.85e-24!173;UBERON:0002619!6.89e-24!22;UBERON:0001950!7.51e-22!20;UBERON:0003056!1.11e-21!61;UBERON:0000956!7.03e-21!25;UBERON:0000203!7.03e-21!25;UBERON:0001896!4.23e-16!3;UBERON:0005290!4.23e-16!3;UBERON:0010096!4.23e-16!3;UBERON:0002298!4.71e-16!8;UBERON:0002240!1.16e-15!3;UBERON:0002680!2.90e-14!9;UBERON:0001895!2.90e-14!9;UBERON:0010092!2.90e-14!9;UBERON:0000025!5.90e-14!194;UBERON:0002308!1.36e-13!9;UBERON:0000125!1.36e-13!9;UBERON:0000200!2.16e-13!6;UBERON:0004111!4.86e-12!241;UBERON:0005162!1.08e-11!2;UBERON:0000122!1.08e-11!2;UBERON:0000064!1.18e-11!219;UBERON:0000369!1.19e-11!4;UBERON:0002435!1.19e-11!4;UBERON:0000204!1.19e-11!4;UBERON:0010082!1.19e-11!4;UBERON:0009663!2.43e-11!7;UBERON:0000477!4.99e-10!286;UBERON:0005174!1.36e-09!5;UBERON:0001137!1.36e-09!5;UBERON:0002021!1.72e-09!5;UBERON:0000475!2.15e-09!365;UBERON:0002420!7.65e-09!9;UBERON:0007245!7.65e-09!9;UBERON:0010009!7.65e-09!9;UBERON:0010011!7.65e-09!9;UBERON:0000454!7.65e-09!9;UBERON:0000483!8.71e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002037!2.68e-08!6;UBERON:0006215!2.68e-08!6;UBERON:0000988!6.24e-08!3;UBERON:0005383!1.93e-07!3;UBERON:0005382!1.93e-07!3;UBERON:0002771!2.35e-07!3;UBERON:0000062!3.73e-07!511|ontology_enrichment_uberon_v019=UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0004732;3.04e-46;13!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0001896;3.27e-23;3!UBERON:0005290;3.27e-23;3!UBERON:0004733;5.13e-23;12!UBERON:0002028;5.13e-23;12!UBERON:0002037;2.45e-12;6!UBERON:0002298;2.45e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0000010;1.12e-08;8!UBERON:0001895;1.12e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0004732,3.04e-46,13;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0003076,1.13e-18,15;UBERON:0003057,1.13e-18,15;UBERON:0001781,8.69e-18,4;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0002298,2.74e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0000010,1.12e-08,8;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:123355631..123355643,- | |||
|id=chr10:123355631..123355643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0006215;3.27e-23;3!UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.34e-61!57;UBERON:0005068!1.34e-61!57;UBERON:0006241!1.34e-61!57;UBERON:0007135!1.34e-61!57;UBERON:0005743!9.02e-48!86;UBERON:0001017!6.30e-47!82;UBERON:0002616!1.42e-46!59;UBERON:0000073!5.70e-46!94;UBERON:0001016!5.70e-46!94;UBERON:0003075!3.63e-45!86;UBERON:0007284!3.63e-45!86;UBERON:0002346!6.77e-43!90;UBERON:0000955!9.61e-42!69;UBERON:0006238!9.61e-42!69;UBERON:0003076!3.97e-39!15;UBERON:0003057!3.97e-39!15;UBERON:0007023!1.68e-37!115;UBERON:0001893!5.78e-37!34;UBERON:0001869!1.34e-34!32;UBERON:0002791!1.29e-33!33;UBERON:0002020!1.53e-32!34;UBERON:0003528!1.53e-32!34;UBERON:0004732!8.24e-31!13;UBERON:0002780!3.71e-30!41;UBERON:0001890!3.71e-30!41;UBERON:0006240!3.71e-30!41;UBERON:0003080!2.30e-29!42;UBERON:0000153!1.16e-27!129;UBERON:0007811!1.16e-27!129;UBERON:0000033!4.05e-27!123;UBERON:0004733!2.21e-26!12;UBERON:0002028!2.21e-26!12;UBERON:0007277!2.21e-26!12;UBERON:0004121!1.12e-24!169;UBERON:0000924!5.85e-24!173;UBERON:0006601!5.85e-24!173;UBERON:0002619!6.89e-24!22;UBERON:0001950!7.51e-22!20;UBERON:0003056!1.11e-21!61;UBERON:0000956!7.03e-21!25;UBERON:0000203!7.03e-21!25;UBERON:0001896!4.23e-16!3;UBERON:0005290!4.23e-16!3;UBERON:0010096!4.23e-16!3;UBERON:0002298!4.71e-16!8;UBERON:0002240!1.16e-15!3;UBERON:0002680!2.90e-14!9;UBERON:0001895!2.90e-14!9;UBERON:0010092!2.90e-14!9;UBERON:0000025!5.90e-14!194;UBERON:0002308!1.36e-13!9;UBERON:0000125!1.36e-13!9;UBERON:0000200!2.16e-13!6;UBERON:0004111!4.86e-12!241;UBERON:0005162!1.08e-11!2;UBERON:0000122!1.08e-11!2;UBERON:0000064!1.18e-11!219;UBERON:0000369!1.19e-11!4;UBERON:0002435!1.19e-11!4;UBERON:0000204!1.19e-11!4;UBERON:0010082!1.19e-11!4;UBERON:0009663!2.43e-11!7;UBERON:0000477!4.99e-10!286;UBERON:0005174!1.36e-09!5;UBERON:0001137!1.36e-09!5;UBERON:0002021!1.72e-09!5;UBERON:0000475!2.15e-09!365;UBERON:0002420!7.65e-09!9;UBERON:0007245!7.65e-09!9;UBERON:0010009!7.65e-09!9;UBERON:0010011!7.65e-09!9;UBERON:0000454!7.65e-09!9;UBERON:0000483!8.71e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002037!2.68e-08!6;UBERON:0006215!2.68e-08!6;UBERON:0000988!6.24e-08!3;UBERON:0005383!1.93e-07!3;UBERON:0005382!1.93e-07!3;UBERON:0002771!2.35e-07!3;UBERON:0000062!3.73e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0004732;3.04e-46;13!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0001896;3.27e-23;3!UBERON:0005290;3.27e-23;3!UBERON:0004733;5.13e-23;12!UBERON:0002028;5.13e-23;12!UBERON:0002037;2.45e-12;6!UBERON:0002298;2.45e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0000010;1.12e-08;8!UBERON:0001895;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0004732,3.04e-46,13;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0003076,1.13e-18,15;UBERON:0003057,1.13e-18,15;UBERON:0001781,8.69e-18,4;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0002298,2.74e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0000010,1.12e-08,8;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr10:123355631..123355643,- | |||
}} |
Revision as of 12:05, 10 September 2013
Short description: | p@chr10:123355631..123355643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:123355631..123355643, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
posterior neural tube | 1.13e-18 | 15 |
chordal neural plate | 1.13e-18 | 15 |
layer of retina | 8.69e-18 | 4 |
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
brainstem | 2.74e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
peripheral nervous system | 1.12e-08 | 8 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.