FFCP PHASE1:Hg19::chr11:64058758..64058782,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50801|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6279|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000538846_5end|coexpression_cluster_id=C3|description=CAGE_peak_1_at_KCNK4_5end|id=chr11:64058758..64058782,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;1.30e-19;2!UBERON:0006601;1.14e-14;82!UBERON:0006222;2.74e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.30e-66!34;UBERON:0001049!1.34e-64!57;UBERON:0005068!1.34e-64!57;UBERON:0006241!1.34e-64!57;UBERON:0007135!1.34e-64!57;UBERON:0002791!2.11e-63!33;UBERON:0002780!5.24e-63!41;UBERON:0001890!5.24e-63!41;UBERON:0006240!5.24e-63!41;UBERON:0002020!1.42e-61!34;UBERON:0003528!1.42e-61!34;UBERON:0003080!2.34e-61!42;UBERON:0001869!5.29e-61!32;UBERON:0001017!1.45e-56!82;UBERON:0002616!6.93e-55!59;UBERON:0000955!7.44e-55!69;UBERON:0006238!7.44e-55!69;UBERON:0005743!1.57e-53!86;UBERON:0000073!1.28e-47!94;UBERON:0001016!1.28e-47!94;UBERON:0002619!1.81e-45!22;UBERON:0002346!1.87e-45!90;UBERON:0003075!2.52e-45!86;UBERON:0007284!2.52e-45!86;UBERON:0001950!1.03e-44!20;UBERON:0003056!3.82e-43!61;UBERON:0000956!1.17e-39!25;UBERON:0000203!1.17e-39!25;UBERON:0007023!5.40e-38!115;UBERON:0000033!1.21e-32!123;UBERON:0000153!1.07e-30!129;UBERON:0007811!1.07e-30!129;UBERON:0002420!1.11e-30!9;UBERON:0007245!1.11e-30!9;UBERON:0010009!1.11e-30!9;UBERON:0010011!1.11e-30!9;UBERON:0000454!1.11e-30!9;UBERON:0000924!5.92e-26!173;UBERON:0006601!5.92e-26!173;UBERON:0004121!2.53e-25!169;UBERON:0009663!5.23e-24!7;UBERON:0002308!8.52e-24!9;UBERON:0000125!8.52e-24!9;UBERON:0001871!6.94e-21!7;UBERON:0000200!1.07e-20!6;UBERON:0001872!1.60e-17!5;UBERON:0000025!5.01e-16!194;UBERON:0000369!2.17e-15!4;UBERON:0002435!2.17e-15!4;UBERON:0000204!2.17e-15!4;UBERON:0010082!2.17e-15!4;UBERON:0000349!5.87e-12!5;UBERON:0004111!6.01e-12!241;UBERON:0005383!6.16e-12!3;UBERON:0005382!6.16e-12!3;UBERON:0000064!2.91e-11!219;UBERON:0002771!6.74e-11!3;UBERON:0000477!4.34e-10!286;UBERON:0000483!2.33e-09!309;UBERON:0000119!3.54e-09!312;UBERON:0001873!1.75e-08!2;UBERON:0010122!1.75e-08!2;UBERON:0001876!2.17e-08!2;UBERON:0001870!2.99e-08!2;UBERON:0000475!1.04e-07!365;UBERON:0001875!1.83e-07!2;UBERON:0006514!1.83e-07!2;UBERON:0003076!2.85e-07!15;UBERON:0003057!2.85e-07!15;UBERON:0002298!7.73e-07!8|ontology_enrichment_uberon_v019=UBERON:0001869;3.12e-68;32!UBERON:0001893;8.83e-66;34!UBERON:0002791;4.57e-63;32!UBERON:0001950;1.24e-59;20!UBERON:0003528;5.43e-58;34!UBERON:0002020;5.43e-58;34!UBERON:0002619;2.67e-54;22!UBERON:0000956;7.83e-48;25!UBERON:0000203;7.83e-48;25!UBERON:0002780;5.15e-45;41!UBERON:0001890;5.15e-45;41!UBERON:0000369;1.18e-37;4!UBERON:0002435;1.18e-37;4!UBERON:0000204;1.18e-37;4!UBERON:0002420;9.44e-37;9!UBERON:0007245;9.44e-37;9!UBERON:0010009;9.44e-37;9!UBERON:0010011;9.44e-37;9!UBERON:0000454;9.44e-37;9!UBERON:0000073;1.24e-29;53!UBERON:0002616;1.24e-29;53!UBERON:0000955;7.12e-29;68!UBERON:0005383;1.42e-28;3!UBERON:0005382;1.42e-28;3!UBERON:0001017;1.14e-25;75!UBERON:0000200;5.11e-24;6!UBERON:0009663;1.16e-21;7!UBERON:0001871;3.87e-21;6!UBERON:0001873;1.30e-19;2!UBERON:0001876;2.06e-19;2!UBERON:0000349;2.32e-17;5!UBERON:0001016;2.88e-17;83!UBERON:0000125;6.60e-17;9!UBERON:0002308;6.60e-17;9!UBERON:0001872;1.13e-16;5!UBERON:0001870;6.96e-13;3!UBERON:0001882;7.05e-11;1!UBERON:0005403;7.05e-11;1!UBERON:0002022;9.37e-11;1!UBERON:0001874;9.37e-11;1!UBERON:0007023;1.17e-10;114!UBERON:0002581;2.74e-10;1!UBERON:0002902;2.74e-10;1!UBERON:0009899;2.74e-10;1!UBERON:0007190;2.74e-10;1!UBERON:0002021;4.37e-08;5!UBERON:0011216;3.32e-07;132!UBERON:0010314;3.73e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.55e-76,32;UBERON:0001893,5.06e-72,34;UBERON:0002791,1.27e-67,32;UBERON:0002780,7.02e-67,41;UBERON:0001890,7.02e-67,41;UBERON:0003080,7.02e-67,41;UBERON:0006240,7.02e-67,41;UBERON:0003528,1.26e-63,34;UBERON:0002020,1.26e-63,34;UBERON:0001950,1.53e-59,20;UBERON:0002619,3.25e-54,22;UBERON:0000073,1.94e-51,53;UBERON:0002616,1.94e-51,53;UBERON:0000955,8.30e-49,68;UBERON:0006238,8.30e-49,68;UBERON:0001049,1.37e-48,56;UBERON:0005068,1.37e-48,56;UBERON:0006241,1.37e-48,56;UBERON:0007135,1.37e-48,56;UBERON:0000956,9.30e-48,25;UBERON:0000203,9.30e-48,25;UBERON:0001017,4.70e-45,81;UBERON:0003056,1.86e-44,61;UBERON:0001016,2.29e-40,89;UBERON:0000369,1.13e-37,4;UBERON:0002435,1.13e-37,4;UBERON:0000204,1.13e-37,4;UBERON:0010082,1.13e-37,4;UBERON:0002420,1.01e-36,9;UBERON:0007245,1.01e-36,9;UBERON:0010009,1.01e-36,9;UBERON:0010011,1.01e-36,9;UBERON:0000454,1.01e-36,9;UBERON:0003075,1.59e-32,82;UBERON:0007284,1.59e-32,82;UBERON:0002346,6.66e-31,86;UBERON:0005383,1.30e-28,3;UBERON:0005382,1.30e-28,3;UBERON:0007023,8.68e-26,114;UBERON:0010371,3.95e-25,104;UBERON:0000200,3.17e-24,6;UBERON:0009663,1.13e-21,7;UBERON:0001871,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6279 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000538846_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_KCNK4_5end | |||
|id=chr11:64058758..64058782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.30e-19;2!UBERON:0006601;1.14e-14;82!UBERON:0006222;2.74e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@KCNK4 | |||
}} |
Revision as of 18:44, 10 September 2013
Short description: | p1@KCNK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KCNK4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000538846_5end |
EntrezGene: | KCNK4 |
HGNC: | 6279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.