FFCP PHASE1:Hg19::chr12:53342893..53342911,+: Difference between revisions
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{{FFCP | 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249301559703,27.3820834969621,95.6206019041985,47.2687309671714,25.1592241988783,0|short_description=p1@KRT18}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6430 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000549078_5end | |||
|coexpression_cluster_id=C819 | |||
|description=CAGE_peak_1_at_KRT18_5end | |||
|id=chr12:53342893..53342911,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.15e-56!254;CL:0002321!1.09e-18!248;CL:0000220!2.87e-18!246;CL:0000223!1.65e-15!59;CL:0000076!4.03e-14!62;CL:0000077!2.42e-11!19;CL:0002076!3.82e-11!43;CL:0000222!5.91e-09!119;CL:0000213!2.61e-08!57;CL:0000215!2.61e-08!57 | |||
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|ontology_enrichment_development_v019=CL:0000223;5.94e-09;58!UBERON:0008947;9.86e-08;29!UBERON:0001041;1.66e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.58e-28!106;DOID:0050687!2.27e-24!143;DOID:162!6.98e-13!235;DOID:14566!1.70e-12!239;DOID:299!1.73e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.59e-09;25!DOID:305;8.32e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.64e-28,106;DOID:0050687,8.17e-25,143;DOID:162,1.37e-14,235;DOID:14566,3.98e-14,239;DOID:299,1.58e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.82e-24!169;UBERON:0000925!9.82e-24!169;UBERON:0006595!9.82e-24!169;UBERON:0000466!3.47e-23!126;UBERON:0004921!2.89e-21!129;UBERON:0004185!2.89e-21!129;UBERON:0003104!7.61e-21!238;UBERON:0009142!7.61e-21!238;UBERON:0001048!8.82e-21!168;UBERON:0001007!8.55e-20!155;UBERON:0001555!8.55e-20!155;UBERON:0007026!8.55e-20!155;UBERON:0000077!1.60e-19!130;UBERON:0005177!7.49e-19!107;UBERON:0009569!1.42e-18!113;UBERON:0005911!5.71e-17!82;UBERON:0002100!6.35e-17!216;UBERON:0001041!1.25e-16!98;UBERON:0000464!1.61e-16!104;UBERON:0003914!4.12e-16!118;UBERON:0000481!1.36e-15!347;UBERON:0005172!9.66e-13!55;UBERON:0005173!9.66e-13!55;UBERON:0000490!1.28e-12!138;UBERON:0002417!1.59e-12!61;UBERON:0000916!1.59e-12!61;UBERON:0003929!8.60e-11!54;UBERON:0000119!1.11e-10!312;UBERON:0002553!1.49e-10!70;UBERON:0000483!2.44e-10!309;UBERON:0008947!2.80e-10!38;UBERON:0003258!2.80e-10!38;UBERON:0006554!3.53e-10!44;UBERON:0001008!5.58e-10!45;UBERON:0003886!6.06e-10!63;UBERON:0000477!7.38e-10!286;UBERON:0000063!2.07e-09!97;UBERON:0000058!2.19e-09!26;UBERON:0007499!3.04e-09!25;UBERON:0000065!3.33e-09!53;UBERON:0009856!3.95e-09!26;UBERON:0009497!5.60e-09!25;UBERON:0000015!5.60e-09!25;UBERON:0002423!5.60e-09!25;UBERON:0006235!5.60e-09!25;UBERON:0004161!5.60e-09!25;UBERON:0004111!8.88e-09!241;UBERON:0000475!1.02e-08!365;UBERON:0000468!1.36e-08!659;UBERON:0000072!1.39e-08!46;UBERON:0005631!2.37e-08!14;UBERON:0000158!2.37e-08!14;UBERON:0003064!2.52e-08!37;UBERON:0001004!2.94e-08!72;UBERON:0005153!3.53e-08!37;UBERON:0005256!3.95e-08!143;UBERON:0002113!7.02e-08!27;UBERON:0003918!7.02e-08!27;UBERON:0005095!7.02e-08!27;UBERON:0007687!7.02e-08!27;UBERON:0003103!7.20e-08!69;UBERON:0000064!7.26e-08!219;UBERON:0005156!7.42e-08!59;UBERON:0000990!7.42e-08!59;UBERON:0008835!8.97e-08!22;UBERON:0003894!8.97e-08!22;UBERON:0009854!1.12e-07!23;UBERON:0002530!2.13e-07!59;UBERON:0005157!2.46e-07!51;UBERON:0000926!4.29e-07!448;UBERON:0004120!4.29e-07!448;UBERON:0006603!4.29e-07!448;UBERON:0002365!5.33e-07!31;UBERON:0002330!5.33e-07!31;UBERON:0000915!5.69e-07!52;UBERON:0005178!6.64e-07!34;UBERON:0002224!6.64e-07!34;UBERON:0004876!7.34e-07!20;UBERON:0000949!7.85e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.22e-09;30!UBERON:0001008;4.22e-09;30!UBERON:0002423;4.53e-09;25!UBERON:0005172;5.44e-09;52!UBERON:0005173;5.44e-09;52!UBERON:0000072;1.75e-08;37!UBERON:0005911;2.55e-08;36!UBERON:0002113;2.66e-08;24!UBERON:0011143;2.66e-08;24!UBERON:0000065;3.44e-08;44!UBERON:0005177;1.12e-07;99!UBERON:0002417;1.84e-07;58!UBERON:0000916;1.84e-07;58!UBERON:0006555;2.86e-07;15!UBERON:0004819;2.86e-07;15!UBERON:0001285;2.86e-07;15!UBERON:0007684;2.86e-07;15!UBERON:0000490;3.84e-07;33!UBERON:0004807;6.37e-07;22!UBERON:0002365;7.32e-07;31!UBERON:0002330;7.32e-07;31!UBERON:0004211;9.41e-07;10!UBERON:0009773;9.41e-07;10!UBERON:0001231;9.41e-07;10!UBERON:0004810;9.41e-07;10 | |||
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| |||
|short_description=p1@KRT18 | |||
}} |
Revision as of 23:14, 10 September 2013
Short description: | p1@KRT18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRT18_5end |
Coexpression cluster: | C819_Alveolar_MCF7_mesothelioma_endometrioid_signet_Renal_gastric |
Association with transcript: | 0bp_to_ENST00000549078_5end |
EntrezGene: | KRT18 |
HGNC: | 6430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.93e-57 | 253 |
embryonic cell | 8.59e-19 | 250 |
endodermal cell | 2.18e-16 | 58 |
squamous epithelial cell | 1.91e-13 | 63 |
endo-epithelial cell | 5.96e-12 | 42 |
mesothelial cell | 1.85e-11 | 19 |
mesodermal cell | 4.31e-09 | 121 |
lining cell | 1.13e-08 | 58 |
barrier cell | 1.13e-08 | 58 |
extraembryonic cell | 1.46e-07 | 19 |
epithelial cell of nephron | 2.88e-07 | 15 |
kidney cell | 4.72e-07 | 17 |
kidney epithelial cell | 4.72e-07 | 17 |
kidney tubule cell | 9.42e-07 | 10 |
nephron tubule epithelial cell | 9.42e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.64e-28 | 106 |
cell type cancer | 8.17e-25 | 143 |
cancer | 1.37e-14 | 235 |
disease of cellular proliferation | 3.98e-14 | 239 |
adenocarcinoma | 1.58e-09 | 25 |
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