FFCP PHASE1:Hg19::chr18:24765248..24765279,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83539|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19898|TSSclassifier=S|UniProt=Q7L1S5|association_with_transcript=9bp_to_ENST00000284224,NM_031422,NR_045066,uc002kwe.2_5end|description=CAGE_peak_1_at_CHST9_5end|id=chr18:24765248..24765279,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;2.02e-09;5!CL:1000507;8.45e-07;10!CL:1000494;8.45e-07;10|ontology_enrichment_celltype_v019_2=CL:0002322,2.21e-09,5;CL:1000507,8.07e-07,10;CL:1000494,8.07e-07,10|ontology_enrichment_development_v019=UBERON:0006601;1.41e-08;82!UBERON:0003104;1.36e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.19e-47!115;UBERON:0001049!1.80e-29!57;UBERON:0005068!1.80e-29!57;UBERON:0006241!1.80e-29!57;UBERON:0007135!1.80e-29!57;UBERON:0005743!3.06e-28!86;UBERON:0001017!4.92e-28!82;UBERON:0000073!1.41e-26!94;UBERON:0001016!1.41e-26!94;UBERON:0003075!3.42e-25!86;UBERON:0007284!3.42e-25!86;UBERON:0002346!3.46e-23!90;UBERON:0002616!4.01e-23!59;UBERON:0002780!5.56e-22!41;UBERON:0001890!5.56e-22!41;UBERON:0006240!5.56e-22!41;UBERON:0000955!1.58e-21!69;UBERON:0006238!1.58e-21!69;UBERON:0003080!3.58e-21!42;UBERON:0004121!1.01e-18!169;UBERON:0000924!1.03e-17!173;UBERON:0006601!1.03e-17!173;UBERON:0002020!2.86e-17!34;UBERON:0003528!2.86e-17!34;UBERON:0001893!3.20e-17!34;UBERON:0002791!1.38e-16!33;UBERON:0000153!1.78e-16!129;UBERON:0007811!1.78e-16!129;UBERON:0001869!1.21e-15!32;UBERON:0003056!2.98e-15!61;UBERON:0000033!4.65e-15!123;UBERON:0000481!2.93e-14!347;UBERON:0002619!6.52e-14!22;UBERON:0004111!8.88e-14!241;UBERON:0000025!1.63e-13!194;UBERON:0000956!1.38e-12!25;UBERON:0000203!1.38e-12!25;UBERON:0000062!1.57e-12!511;UBERON:0000475!1.66e-12!365;UBERON:0001950!2.54e-12!20;UBERON:0005177!3.05e-12!107;UBERON:0000477!1.54e-11!286;UBERON:0000922!4.19e-11!612;UBERON:0000489!1.79e-10!32;UBERON:0000064!1.84e-10!219;UBERON:0003103!6.84e-10!69;UBERON:0000483!1.68e-09!309;UBERON:0003076!2.00e-09!15;UBERON:0003057!2.00e-09!15;UBERON:0000464!3.05e-09!104;UBERON:0000468!3.31e-09!659;UBERON:0000119!3.73e-09!312;UBERON:0000466!3.97e-09!126;UBERON:0005172!1.16e-08!55;UBERON:0005173!1.16e-08!55;UBERON:0000923!2.69e-08!604;UBERON:0005291!2.69e-08!604;UBERON:0006598!2.69e-08!604;UBERON:0002532!2.69e-08!604;UBERON:0000467!2.76e-08!625;UBERON:0002050!3.29e-08!605;UBERON:0005423!3.29e-08!605;UBERON:0000480!3.36e-08!626;UBERON:0003135!4.57e-08!11;UBERON:0002553!1.06e-07!70;UBERON:0004732!1.75e-07!13;UBERON:0002113!2.33e-07!27;UBERON:0003918!2.33e-07!27;UBERON:0005095!2.33e-07!27;UBERON:0007687!2.33e-07!27;UBERON:0001871!3.87e-07!7;UBERON:0002417!5.48e-07!61;UBERON:0000916!5.48e-07!61;UBERON:0004733!8.86e-07!12;UBERON:0002028!8.86e-07!12;UBERON:0007277!8.86e-07!12|ontology_enrichment_uberon_v019=UBERON:0007023;4.75e-12;114!UBERON:0002780;9.74e-12;41!UBERON:0001890;9.74e-12;41!UBERON:0000922;4.65e-11;49!UBERON:0000073;2.30e-10;53!UBERON:0002616;2.30e-10;53!UBERON:0002298;1.67e-09;6!UBERON:0003135;2.02e-08;11!UBERON:0001893;2.14e-08;34!UBERON:0002791;2.92e-08;32!UBERON:0001869;3.00e-08;32!UBERON:0003528;4.45e-08;34!UBERON:0002020;4.45e-08;34!UBERON:0000489;7.75e-08;29!UBERON:0000125;1.73e-07;9!UBERON:0002308;1.73e-07;9!UBERON:0001017;2.65e-07;75!UBERON:0001016;4.18e-07;83!UBERON:0000473;7.65e-07;8!UBERON:0004211;8.45e-07;10!UBERON:0009773;8.45e-07;10!UBERON:0001231;8.45e-07;10!UBERON:0004810;8.45e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.59e-38,114;UBERON:0001049,2.60e-20,56;UBERON:0005068,2.60e-20,56;UBERON:0006241,2.60e-20,56;UBERON:0007135,2.60e-20,56;UBERON:0001017,4.39e-18,81;UBERON:0000073,5.26e-17,53;UBERON:0002616,5.26e-17,53;UBERON:0011216,9.17e-17,223;UBERON:0003075,1.00e-16,82;UBERON:0007284,1.00e-16,82;UBERON:0001016,2.65e-16,89;UBERON:0002346,1.75e-15,86;UBERON:0010371,4.70e-14,104;UBERON:0000955,1.42e-13,68;UBERON:0006238,1.42e-13,68;UBERON:0002780,1.19e-12,41;UBERON:0001890,1.19e-12,41;UBERON:0003080,1.19e-12,41;UBERON:0006240,1.19e-12,41;UBERON:0004121,4.06e-12,171;UBERON:0000924,4.06e-12,171;UBERON:0006601,4.06e-12,171;UBERON:0004111,4.55e-12,240;UBERON:0000025,4.65e-11,192;UBERON:0003528,2.87e-10,34;UBERON:0002020,2.87e-10,34;UBERON:0001893,3.19e-10,34;UBERON:0003103,7.51e-10,68;UBERON:0002298,1.09e-09,6;UBERON:0003076,2.13e-09,15;UBERON:0003057,2.13e-09,15;UBERON:0010314,6.82e-09,132;UBERON:0003056,1.38e-08,61;UBERON:0002791,1.70e-08,32;UBERON:0003135,1.81e-08,11;UBERON:0001869,1.93e-08,32;UBERON:0000489,3.08e-08,31;UBERON:0000922,9.28e-08,592;UBERON:0000125,1.69e-07,9;UBERON:0002308,1.69e-07,9;UBERON:0000473,5.68e-07,8;UBERON:0005172,5.80e-07,54;UBERON:0005173,5.80e-07,54;UBERON:0004810,8.07e-07,10;UBERON:0004732,9.78e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0.738726348460727,0,0.313454721478088,0,0,0.125542639594803,1.22261449196722,1.06730766284929,0.550975469195755,0,0,0,0,0.6024118375565,0,0,0.14216923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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19898 | |||
|TSSclassifier=S | |||
|UniProt=Q7L1S5 | |||
|association_with_transcript=9bp_to_ENST00000284224,NM_031422,NR_045066,uc002kwe.2_5end | |||
|description=CAGE_peak_1_at_CHST9_5end | |||
|id=chr18:24765248..24765279,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.02e-09;5!CL:1000507;8.45e-07;10!CL:1000494;8.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.21e-09,5;CL:1000507,8.07e-07,10;CL:1000494,8.07e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-08;82!UBERON:0003104;1.36e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.19e-47!115;UBERON:0001049!1.80e-29!57;UBERON:0005068!1.80e-29!57;UBERON:0006241!1.80e-29!57;UBERON:0007135!1.80e-29!57;UBERON:0005743!3.06e-28!86;UBERON:0001017!4.92e-28!82;UBERON:0000073!1.41e-26!94;UBERON:0001016!1.41e-26!94;UBERON:0003075!3.42e-25!86;UBERON:0007284!3.42e-25!86;UBERON:0002346!3.46e-23!90;UBERON:0002616!4.01e-23!59;UBERON:0002780!5.56e-22!41;UBERON:0001890!5.56e-22!41;UBERON:0006240!5.56e-22!41;UBERON:0000955!1.58e-21!69;UBERON:0006238!1.58e-21!69;UBERON:0003080!3.58e-21!42;UBERON:0004121!1.01e-18!169;UBERON:0000924!1.03e-17!173;UBERON:0006601!1.03e-17!173;UBERON:0002020!2.86e-17!34;UBERON:0003528!2.86e-17!34;UBERON:0001893!3.20e-17!34;UBERON:0002791!1.38e-16!33;UBERON:0000153!1.78e-16!129;UBERON:0007811!1.78e-16!129;UBERON:0001869!1.21e-15!32;UBERON:0003056!2.98e-15!61;UBERON:0000033!4.65e-15!123;UBERON:0000481!2.93e-14!347;UBERON:0002619!6.52e-14!22;UBERON:0004111!8.88e-14!241;UBERON:0000025!1.63e-13!194;UBERON:0000956!1.38e-12!25;UBERON:0000203!1.38e-12!25;UBERON:0000062!1.57e-12!511;UBERON:0000475!1.66e-12!365;UBERON:0001950!2.54e-12!20;UBERON:0005177!3.05e-12!107;UBERON:0000477!1.54e-11!286;UBERON:0000922!4.19e-11!612;UBERON:0000489!1.79e-10!32;UBERON:0000064!1.84e-10!219;UBERON:0003103!6.84e-10!69;UBERON:0000483!1.68e-09!309;UBERON:0003076!2.00e-09!15;UBERON:0003057!2.00e-09!15;UBERON:0000464!3.05e-09!104;UBERON:0000468!3.31e-09!659;UBERON:0000119!3.73e-09!312;UBERON:0000466!3.97e-09!126;UBERON:0005172!1.16e-08!55;UBERON:0005173!1.16e-08!55;UBERON:0000923!2.69e-08!604;UBERON:0005291!2.69e-08!604;UBERON:0006598!2.69e-08!604;UBERON:0002532!2.69e-08!604;UBERON:0000467!2.76e-08!625;UBERON:0002050!3.29e-08!605;UBERON:0005423!3.29e-08!605;UBERON:0000480!3.36e-08!626;UBERON:0003135!4.57e-08!11;UBERON:0002553!1.06e-07!70;UBERON:0004732!1.75e-07!13;UBERON:0002113!2.33e-07!27;UBERON:0003918!2.33e-07!27;UBERON:0005095!2.33e-07!27;UBERON:0007687!2.33e-07!27;UBERON:0001871!3.87e-07!7;UBERON:0002417!5.48e-07!61;UBERON:0000916!5.48e-07!61;UBERON:0004733!8.86e-07!12;UBERON:0002028!8.86e-07!12;UBERON:0007277!8.86e-07!12 | |||
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| |||
|short_description=p1@CHST9 | |||
}} |
Revision as of 17:07, 11 September 2013
Short description: | p1@CHST9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CHST9_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000284224, NM_031422, NR_045066, uc002kwe.2_5end |
EntrezGene: | CHST9 |
HGNC: | 19898 |
UniProt: | Q7L1S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.21e-09 | 5 |
kidney tubule cell | 8.07e-07 | 10 |
nephron tubule epithelial cell | 8.07e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.