FFCP PHASE1:Hg19::chr1:228604544..228604568,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51127|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13430|TSSclassifier=S|UniProt=Q9Y577|association_with_transcript=0bp_to_ENST00000457345_5end|coexpression_cluster_id=C3947|description=CAGE_peak_1_at_TRIM17_5end|id=chr1:228604544..228604568,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.74e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.55e-24!115;UBERON:0001049!7.81e-24!57;UBERON:0005068!7.81e-24!57;UBERON:0006241!7.81e-24!57;UBERON:0007135!7.81e-24!57;UBERON:0005743!3.22e-23!86;UBERON:0002616!2.95e-22!59;UBERON:0000073!6.34e-22!94;UBERON:0001016!6.34e-22!94;UBERON:0001017!4.37e-21!82;UBERON:0003075!1.24e-20!86;UBERON:0007284!1.24e-20!86;UBERON:0002780!1.39e-20!41;UBERON:0001890!1.39e-20!41;UBERON:0006240!1.39e-20!41;UBERON:0002346!1.78e-20!90;UBERON:0000955!3.41e-20!69;UBERON:0006238!3.41e-20!69;UBERON:0001893!5.74e-20!34;UBERON:0002020!7.30e-20!34;UBERON:0003528!7.30e-20!34;UBERON:0003080!9.88e-20!42;UBERON:0001869!2.92e-19!32;UBERON:0002791!3.38e-19!33;UBERON:0003056!8.68e-19!61;UBERON:0000924!1.25e-15!173;UBERON:0006601!1.25e-15!173;UBERON:0004121!1.75e-15!169;UBERON:0000153!1.17e-14!129;UBERON:0007811!1.17e-14!129;UBERON:0000033!2.67e-14!123;UBERON:0000956!8.04e-14!25;UBERON:0000203!8.04e-14!25;UBERON:0002619!1.98e-12!22;UBERON:0001950!7.46e-11!20;UBERON:0000064!4.18e-09!219;UBERON:0002420!4.14e-08!9;UBERON:0007245!4.14e-08!9;UBERON:0010009!4.14e-08!9;UBERON:0010011!4.14e-08!9;UBERON:0000454!4.14e-08!9;UBERON:0002308!1.25e-07!9;UBERON:0000125!1.25e-07!9;UBERON:0000483!8.13e-07!309;UBERON:0000119!8.99e-07!312|ontology_enrichment_uberon_v019=UBERON:0001869;1.05e-37;32!UBERON:0002791;9.37e-36;32!UBERON:0001893;1.48e-34;34!UBERON:0003528;3.57e-34;34!UBERON:0002020;3.57e-34;34!UBERON:0002619;4.13e-29;22!UBERON:0000956;2.94e-28;25!UBERON:0000203;2.94e-28;25!UBERON:0002780;1.60e-27;41!UBERON:0001890;1.60e-27;41!UBERON:0001950;6.73e-25;20!UBERON:0000073;4.21e-23;53!UBERON:0002616;4.21e-23;53!UBERON:0000955;7.00e-17;68!UBERON:0001017;7.39e-16;75!UBERON:0000200;3.08e-15;6!UBERON:0002420;1.64e-13;9!UBERON:0007245;1.64e-13;9!UBERON:0010009;1.64e-13;9!UBERON:0010011;1.64e-13;9!UBERON:0000454;1.64e-13;9!UBERON:0000125;4.53e-13;9!UBERON:0002308;4.53e-13;9!UBERON:0009663;7.31e-13;7!UBERON:0001016;1.04e-11;83!UBERON:0000369;3.75e-11;4!UBERON:0002435;3.75e-11;4!UBERON:0000204;3.75e-11;4!UBERON:0000349;6.06e-09;5!UBERON:0002021;8.71e-09;5!UBERON:0005383;9.29e-09;3!UBERON:0005382;9.29e-09;3!UBERON:0001870;1.23e-08;3!UBERON:0007023;8.61e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.91e-43,32;UBERON:0000073,7.12e-41,53;UBERON:0002616,7.12e-41,53;UBERON:0003528,1.39e-40,34;UBERON:0002020,1.39e-40,34;UBERON:0001893,1.58e-40,34;UBERON:0002791,6.96e-40,32;UBERON:0002780,2.81e-38,41;UBERON:0001890,2.81e-38,41;UBERON:0003080,2.81e-38,41;UBERON:0006240,2.81e-38,41;UBERON:0001049,3.22e-38,56;UBERON:0005068,3.22e-38,56;UBERON:0006241,3.22e-38,56;UBERON:0007135,3.22e-38,56;UBERON:0000955,9.98e-36,68;UBERON:0006238,9.98e-36,68;UBERON:0001017,2.62e-32,81;UBERON:0003056,8.63e-30,61;UBERON:0002619,1.04e-29,22;UBERON:0002346,5.85e-29,86;UBERON:0003075,6.72e-29,82;UBERON:0007284,6.72e-29,82;UBERON:0000956,7.69e-29,25;UBERON:0000203,7.69e-29,25;UBERON:0001016,4.14e-28,89;UBERON:0001950,2.11e-25,20;UBERON:0010371,9.42e-21,104;UBERON:0007023,1.16e-20,114;UBERON:0010314,5.77e-18,132;UBERON:0000200,7.96e-16,6;UBERON:0004121,1.43e-15,171;UBERON:0000924,1.43e-15,171;UBERON:0006601,1.43e-15,171;UBERON:0002420,2.21e-13,9;UBERON:0007245,2.21e-13,9;UBERON:0010009,2.21e-13,9;UBERON:0010011,2.21e-13,9;UBERON:0000454,2.21e-13,9;UBERON:0000125,4.13e-13,9;UBERON:0002308,4.13e-13,9;UBERON:0009663,1.01e-12,7;UBERON:0000025,1.81e-11,192;UBERON:0000369,2.69e-11,4;UBERON:0002435,2.69e-11,4;UBERON:0000204,2.69e-11,4;UBERON:0010082,2.69e-11,4;UBERON:0011216,7.32e-11,223;UBERON:0004111,4.86e-09,240;UBERON:0000349,5.55e-09,5;UBERON:0005383,5.82e-09,3;UBERON:0005382,5.82e-09,3;UBERON:0001870,8.60e-09,3;UBERON:0002021,8.65e-09,5;UBERON:0000483,6.26e-07,306;UBERON:0000119,9.28e-07,309|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0.313454721478088,1.43117993565528,0.410623275218653,0.376627918784408,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,1.57204305099666,0.205601498999509,0.167186495390678,0,0,0,0.891283655081389,0.294605907474837,0,0,1.0247305578054,0.780356085359269,0,0,0,0.14828656316206,0.267540828089713,0,0.793165398882963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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13430 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y577 | |||
|association_with_transcript=0bp_to_ENST00000457345_5end | |||
|coexpression_cluster_id=C3947 | |||
|description=CAGE_peak_1_at_TRIM17_5end | |||
|id=chr1:228604544..228604568,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.74e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@TRIM17 | |||
}} |
Revision as of 04:03, 12 September 2013
Short description: | p1@TRIM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRIM17_5end |
Coexpression cluster: | C3947_cerebellum_amygdala_parietal_middle_caudate_occipital_olfactory |
Association with transcript: | 0bp_to_ENST00000457345_5end |
EntrezGene: | TRIM17 |
HGNC: | 13430 |
UniProt: | Q9Y577 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.