FFCP PHASE1:Mm9::chr10:109270251..109270276,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:109270251..109270276,-|id=chr10:109270251..109270276,-|ontology_enrichment_celltype=CL:0000117!2.76e-15!23;CL:0000337!2.76e-15!23;CL:0000540!8.36e-09!33;CL:0000047!8.36e-09!33;CL:0000031!8.36e-09!33;CL:0000404!8.36e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-13,23;CL:0000337,2.63e-13,23;CL:0000540,1.44e-08,33;CL:0000047,1.44e-08,33;CL:0000031,1.44e-08,33;CL:0000404,1.44e-08,33;CL:0002613,2.58e-08,3;CL:0002610,5.85e-08,3;CL:0000393,6.66e-07,39;CL:0000211,6.66e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.14e-25!52;UBERON:0005068!1.14e-25!52;UBERON:0006241!1.14e-25!52;UBERON:0007135!1.14e-25!52;UBERON:0002020!4.38e-25!34;UBERON:0000955!7.07e-24!50;UBERON:0006238!7.07e-24!50;UBERON:0001017!2.23e-23!73;UBERON:0005743!2.23e-23!73;UBERON:0002616!5.78e-23!49;UBERON:0000073!2.36e-22!75;UBERON:0001016!2.36e-22!75;UBERON:0000033!8.07e-22!63;UBERON:0002346!2.48e-20!71;UBERON:0003075!2.48e-20!71;UBERON:0007284!2.48e-20!71;UBERON:0002791!2.74e-20!29;UBERON:0003528!2.74e-20!29;UBERON:0001893!2.74e-20!29;UBERON:0003056!1.57e-18!49;UBERON:0003080!3.18e-18!40;UBERON:0002780!2.97e-17!39;UBERON:0001890!2.97e-17!39;UBERON:0006240!2.97e-17!39;UBERON:0004121!1.65e-16!102;UBERON:0000924!1.65e-16!102;UBERON:0006601!1.65e-16!102;UBERON:0002021!1.26e-13!10;UBERON:0000411!1.26e-13!10;UBERON:0001950!1.26e-13!10;UBERON:0002619!8.39e-13!17;UBERON:0007811!1.74e-12!86;UBERON:0000956!2.10e-12!21;UBERON:0001869!2.10e-12!21;UBERON:0000203!2.10e-12!21;UBERON:0000153!2.15e-12!94;UBERON:0002420!1.77e-09!8;UBERON:0007245!1.77e-09!8;UBERON:0010009!1.77e-09!8;UBERON:0010011!1.77e-09!8;UBERON:0000454!1.77e-09!8;UBERON:0003076!4.89e-08!12;UBERON:0003057!4.89e-08!12;UBERON:0002240!5.38e-07!6;UBERON:0005174!5.38e-07!6;UBERON:0001137!5.38e-07!6;UBERON:0000369!5.39e-07!5;UBERON:0002435!5.39e-07!5;UBERON:0000204!5.39e-07!5;UBERON:0010082!5.39e-07!5;UBERON:0002298!7.84e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.71e-37,54;UBERON:0002020,3.31e-35,34;UBERON:0001049,3.06e-33,52;UBERON:0005068,3.06e-33,52;UBERON:0006241,3.06e-33,52;UBERON:0007135,3.06e-33,52;UBERON:0001017,3.36e-32,73;UBERON:0003528,3.29e-31,29;UBERON:0002791,3.29e-31,29;UBERON:0001893,3.29e-31,29;UBERON:0001016,3.53e-31,75;UBERON:0003080,2.34e-29,40;UBERON:0002021,3.55e-28,10;UBERON:0000411,3.55e-28,10;UBERON:0001950,3.55e-28,10;UBERON:0002780,2.12e-27,39;UBERON:0001890,2.12e-27,39;UBERON:0006240,2.12e-27,39;UBERON:0002616,3.10e-27,46;UBERON:0000955,1.51e-26,47;UBERON:0006238,1.51e-26,47;UBERON:0002346,6.15e-26,64;UBERON:0003075,6.15e-26,64;UBERON:0007284,6.15e-26,64;UBERON:0004121,2.52e-23,95;UBERON:0000924,2.52e-23,95;UBERON:0006601,2.52e-23,95;UBERON:0003056,4.77e-23,49;UBERON:0002619,2.21e-22,17;UBERON:0010371,4.95e-22,73;UBERON:0000956,9.40e-21,21;UBERON:0001869,9.40e-21,21;UBERON:0000203,9.40e-21,21;UBERON:0010314,2.73e-16,92;UBERON:0000369,1.51e-13,5;UBERON:0002435,1.51e-13,5;UBERON:0000204,1.51e-13,5;UBERON:0010082,1.51e-13,5;UBERON:0000025,5.00e-12,114;UBERON:0002420,1.66e-11,8;UBERON:0007245,1.66e-11,8;UBERON:0010009,1.66e-11,8;UBERON:0010011,1.66e-11,8;UBERON:0000454,1.66e-11,8;UBERON:0004111,7.40e-11,122;UBERON:0011216,3.49e-08,194;UBERON:0004684,5.85e-08,3;UBERON:0002275,5.85e-08,3;UBERON:0002240,6.12e-07,6;UBERON:0005174,6.12e-07,6;UBERON:0001137,6.12e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,1.10434270475807,0.122490799214954,0.383381884072945,0,1.10115880999389,2.29837208553338,2.15049146558741,2.2420668914133,2.19570344645783,2.6045668527838,0.837548997004143,0.56276261003168,1.22238598221448,2.94628585473668,2.70506193518296,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.54644086988199,8.23501085073528,4.77486538028885,3.82413504423008,6.13717097592793,2.70124457927428,3.0825839982874,0,0,0,0,0.260240885925407,0.229902104433473,0,0,0.340182495756639,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,8.28585425712918,12.0308057822273,7.56154002312225,7.53590771747707,4.5323633843382,6.07520250208625,5.85417564191487,7.25027854374727,4.65984280576638,0,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0.888986911206461,0.618105171716683,0,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.576226371643824,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.752875043322645,0.423073039458382,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.689531376628944,1.22769312950907,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p@chr10:109270251..109270276,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:109270251..109270276,- | |||
|id=chr10:109270251..109270276,- | |||
|ontology_enrichment_celltype=CL:0000117!2.76e-15!23;CL:0000337!2.76e-15!23;CL:0000540!8.36e-09!33;CL:0000047!8.36e-09!33;CL:0000031!8.36e-09!33;CL:0000404!8.36e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-13,23;CL:0000337,2.63e-13,23;CL:0000540,1.44e-08,33;CL:0000047,1.44e-08,33;CL:0000031,1.44e-08,33;CL:0000404,1.44e-08,33;CL:0002613,2.58e-08,3;CL:0002610,5.85e-08,3;CL:0000393,6.66e-07,39;CL:0000211,6.66e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-25!52;UBERON:0005068!1.14e-25!52;UBERON:0006241!1.14e-25!52;UBERON:0007135!1.14e-25!52;UBERON:0002020!4.38e-25!34;UBERON:0000955!7.07e-24!50;UBERON:0006238!7.07e-24!50;UBERON:0001017!2.23e-23!73;UBERON:0005743!2.23e-23!73;UBERON:0002616!5.78e-23!49;UBERON:0000073!2.36e-22!75;UBERON:0001016!2.36e-22!75;UBERON:0000033!8.07e-22!63;UBERON:0002346!2.48e-20!71;UBERON:0003075!2.48e-20!71;UBERON:0007284!2.48e-20!71;UBERON:0002791!2.74e-20!29;UBERON:0003528!2.74e-20!29;UBERON:0001893!2.74e-20!29;UBERON:0003056!1.57e-18!49;UBERON:0003080!3.18e-18!40;UBERON:0002780!2.97e-17!39;UBERON:0001890!2.97e-17!39;UBERON:0006240!2.97e-17!39;UBERON:0004121!1.65e-16!102;UBERON:0000924!1.65e-16!102;UBERON:0006601!1.65e-16!102;UBERON:0002021!1.26e-13!10;UBERON:0000411!1.26e-13!10;UBERON:0001950!1.26e-13!10;UBERON:0002619!8.39e-13!17;UBERON:0007811!1.74e-12!86;UBERON:0000956!2.10e-12!21;UBERON:0001869!2.10e-12!21;UBERON:0000203!2.10e-12!21;UBERON:0000153!2.15e-12!94;UBERON:0002420!1.77e-09!8;UBERON:0007245!1.77e-09!8;UBERON:0010009!1.77e-09!8;UBERON:0010011!1.77e-09!8;UBERON:0000454!1.77e-09!8;UBERON:0003076!4.89e-08!12;UBERON:0003057!4.89e-08!12;UBERON:0002240!5.38e-07!6;UBERON:0005174!5.38e-07!6;UBERON:0001137!5.38e-07!6;UBERON:0000369!5.39e-07!5;UBERON:0002435!5.39e-07!5;UBERON:0000204!5.39e-07!5;UBERON:0010082!5.39e-07!5;UBERON:0002298!7.84e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.71e-37,54;UBERON:0002020,3.31e-35,34;UBERON:0001049,3.06e-33,52;UBERON:0005068,3.06e-33,52;UBERON:0006241,3.06e-33,52;UBERON:0007135,3.06e-33,52;UBERON:0001017,3.36e-32,73;UBERON:0003528,3.29e-31,29;UBERON:0002791,3.29e-31,29;UBERON:0001893,3.29e-31,29;UBERON:0001016,3.53e-31,75;UBERON:0003080,2.34e-29,40;UBERON:0002021,3.55e-28,10;UBERON:0000411,3.55e-28,10;UBERON:0001950,3.55e-28,10;UBERON:0002780,2.12e-27,39;UBERON:0001890,2.12e-27,39;UBERON:0006240,2.12e-27,39;UBERON:0002616,3.10e-27,46;UBERON:0000955,1.51e-26,47;UBERON:0006238,1.51e-26,47;UBERON:0002346,6.15e-26,64;UBERON:0003075,6.15e-26,64;UBERON:0007284,6.15e-26,64;UBERON:0004121,2.52e-23,95;UBERON:0000924,2.52e-23,95;UBERON:0006601,2.52e-23,95;UBERON:0003056,4.77e-23,49;UBERON:0002619,2.21e-22,17;UBERON:0010371,4.95e-22,73;UBERON:0000956,9.40e-21,21;UBERON:0001869,9.40e-21,21;UBERON:0000203,9.40e-21,21;UBERON:0010314,2.73e-16,92;UBERON:0000369,1.51e-13,5;UBERON:0002435,1.51e-13,5;UBERON:0000204,1.51e-13,5;UBERON:0010082,1.51e-13,5;UBERON:0000025,5.00e-12,114;UBERON:0002420,1.66e-11,8;UBERON:0007245,1.66e-11,8;UBERON:0010009,1.66e-11,8;UBERON:0010011,1.66e-11,8;UBERON:0000454,1.66e-11,8;UBERON:0004111,7.40e-11,122;UBERON:0011216,3.49e-08,194;UBERON:0004684,5.85e-08,3;UBERON:0002275,5.85e-08,3;UBERON:0002240,6.12e-07,6;UBERON:0005174,6.12e-07,6;UBERON:0001137,6.12e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,1.10434270475807,0.122490799214954,0.383381884072945,0,1.10115880999389,2.29837208553338,2.15049146558741,2.2420668914133,2.19570344645783,2.6045668527838,0.837548997004143,0.56276261003168,1.22238598221448,2.94628585473668,2.70506193518296,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.54644086988199,8.23501085073528,4.77486538028885,3.82413504423008,6.13717097592793,2.70124457927428,3.0825839982874,0,0,0,0,0.260240885925407,0.229902104433473,0,0,0.340182495756639,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,8.28585425712918,12.0308057822273,7.56154002312225,7.53590771747707,4.5323633843382,6.07520250208625,5.85417564191487,7.25027854374727,4.65984280576638,0,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0.888986911206461,0.618105171716683,0,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.576226371643824,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.752875043322645,0.423073039458382,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.689531376628944,1.22769312950907,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:109270251..109270276,- | |||
}} |
Revision as of 15:41, 12 September 2013
Short description: | p@chr10:109270251..109270276, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109270251..109270276, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.63e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.63e-13 | 23 |
neuron | 1.44e-08 | 33 |
neuronal stem cell | 1.44e-08 | 33 |
neuroblast | 1.44e-08 | 33 |
electrically signaling cell | 1.44e-08 | 33 |
striatum neuron | 2.58e-08 | 3 |
raphe nuclei neuron | 5.85e-08 | 3 |
electrically responsive cell | 6.66e-07 | 39 |
electrically active cell | 6.66e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.