FFCP PHASE1:Mm9::chr11:41995709..41995724,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14394|HGNC=|MCL_coexpression_id=1|UniProt=E9Q2L8|association_with_transcript=-44bp_to_ENSMUST00000153147_5end|description=CAGE_peak_4_at_Gabra1_5end|id=chr11:41995709..41995724,-|ontology_enrichment_celltype=CL:0000117!1.85e-11!23;CL:0000337!1.85e-11!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.68e-08,3;CL:0002614,8.28e-08,3;CL:0000117,5.27e-07,23;CL:0000337,5.27e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.47e-23!52;UBERON:0005068!8.47e-23!52;UBERON:0006241!8.47e-23!52;UBERON:0007135!8.47e-23!52;UBERON:0000033!9.84e-23!63;UBERON:0000955!3.03e-22!50;UBERON:0006238!3.03e-22!50;UBERON:0002346!7.42e-22!71;UBERON:0003075!7.42e-22!71;UBERON:0007284!7.42e-22!71;UBERON:0002616!2.28e-21!49;UBERON:0000073!3.09e-21!75;UBERON:0001016!3.09e-21!75;UBERON:0001017!1.14e-20!73;UBERON:0005743!1.14e-20!73;UBERON:0004121!2.08e-19!102;UBERON:0000924!2.08e-19!102;UBERON:0006601!2.08e-19!102;UBERON:0002020!2.65e-18!34;UBERON:0003056!2.43e-17!49;UBERON:0003080!1.09e-16!40;UBERON:0002780!9.30e-16!39;UBERON:0001890!9.30e-16!39;UBERON:0006240!9.30e-16!39;UBERON:0002791!4.37e-15!29;UBERON:0003528!4.37e-15!29;UBERON:0001893!4.37e-15!29;UBERON:0007811!7.91e-13!86;UBERON:0002021!4.06e-11!10;UBERON:0000411!4.06e-11!10;UBERON:0001950!4.06e-11!10;UBERON:0000153!5.39e-11!94;UBERON:0002619!7.78e-10!17;UBERON:0000956!1.45e-09!21;UBERON:0001869!1.45e-09!21;UBERON:0000203!1.45e-09!21;UBERON:0002420!4.83e-07!8;UBERON:0007245!4.83e-07!8;UBERON:0010009!4.83e-07!8;UBERON:0010011!4.83e-07!8;UBERON:0000454!4.83e-07!8;UBERON:0003076!8.74e-07!12;UBERON:0003057!8.74e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-37,54;UBERON:0001049,2.98e-33,52;UBERON:0005068,2.98e-33,52;UBERON:0006241,2.98e-33,52;UBERON:0007135,2.98e-33,52;UBERON:0000955,2.81e-32,47;UBERON:0006238,2.81e-32,47;UBERON:0002616,2.19e-30,46;UBERON:0001017,3.43e-30,73;UBERON:0001016,3.27e-29,75;UBERON:0002346,6.92e-28,64;UBERON:0003075,6.92e-28,64;UBERON:0007284,6.92e-28,64;UBERON:0002020,6.82e-26,34;UBERON:0002021,9.46e-26,10;UBERON:0000411,9.46e-26,10;UBERON:0001950,9.46e-26,10;UBERON:0003528,2.72e-25,29;UBERON:0002791,2.72e-25,29;UBERON:0001893,2.72e-25,29;UBERON:0003080,1.84e-24,40;UBERON:0010371,1.11e-23,73;UBERON:0004121,2.92e-23,95;UBERON:0000924,2.92e-23,95;UBERON:0006601,2.92e-23,95;UBERON:0002780,1.72e-22,39;UBERON:0001890,1.72e-22,39;UBERON:0006240,1.72e-22,39;UBERON:0003056,5.55e-21,49;UBERON:0010314,1.70e-17,92;UBERON:0002619,2.59e-17,17;UBERON:0000956,2.00e-16,21;UBERON:0001869,2.00e-16,21;UBERON:0000203,2.00e-16,21;UBERON:0000025,7.89e-12,114;UBERON:0004111,1.19e-10,122;UBERON:0002950,2.36e-10,4;UBERON:0001891,2.36e-10,4;UBERON:0009616,2.36e-10,4;UBERON:0010286,2.36e-10,4;UBERON:0002420,3.97e-10,8;UBERON:0007245,3.97e-10,8;UBERON:0010009,3.97e-10,8;UBERON:0010011,3.97e-10,8;UBERON:0000454,3.97e-10,8;UBERON:0003076,5.35e-09,12;UBERON:0003057,5.35e-09,12;UBERON:0004684,1.68e-08,3;UBERON:0002275,1.68e-08,3;UBERON:0002038,8.28e-08,3;UBERON:0009663,8.28e-08,3;UBERON:0009661,8.28e-08,3;UBERON:0000125,8.28e-08,3;UBERON:0002308,8.28e-08,3;UBERON:0011216,3.50e-07,194;UBERON:0004733,5.70e-07,6;UBERON:0004732,5.70e-07,6;UBERON:0002028,5.70e-07,6;UBERON:0007277,5.70e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75945888556019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.441737081903227,0.367472397644862,0.0958454710182364,0,22.0231761998777,37.2847027208748,32.1037654505549,0.131886287730194,0.457438218012048,1.56274011167028,17.0301629390842,16.8828783009504,17.5717984943332,1.76777151284201,1.13897344639282,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,1.40444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0.691846491768175,0,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,41.5748731756397,35.6059401582874,0,0,0,0,46.8844701337095,19.6725259212009,1.50785222535437,53.0164176586443,37.5901722275586,40.9342447782333,28.2299797737898,0,0,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0714626446702,0.411618449517138,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,16.5367107687426,15.4719426301708,0,0,0,0,0,0,0,0,0,0,0,20.2432429345738,0,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.885110557024,26.6988637174163,17.1868654031819,25.9498305338968,45.900528824633,51.3667850224996,35.1011700120539,45.9327627288705,52.1113770331835,49.7049899281747,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.565879024158229,0.187283014939765,0.320125762024346,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p4@Gabra1}} | ||
|EntrezGene=14394 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9Q2L8 | |||
|association_with_transcript=-44bp_to_ENSMUST00000153147_5end | |||
|description=CAGE_peak_4_at_Gabra1_5end | |||
|id=chr11:41995709..41995724,- | |||
|ontology_enrichment_celltype=CL:0000117!1.85e-11!23;CL:0000337!1.85e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.68e-08,3;CL:0002614,8.28e-08,3;CL:0000117,5.27e-07,23;CL:0000337,5.27e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.47e-23!52;UBERON:0005068!8.47e-23!52;UBERON:0006241!8.47e-23!52;UBERON:0007135!8.47e-23!52;UBERON:0000033!9.84e-23!63;UBERON:0000955!3.03e-22!50;UBERON:0006238!3.03e-22!50;UBERON:0002346!7.42e-22!71;UBERON:0003075!7.42e-22!71;UBERON:0007284!7.42e-22!71;UBERON:0002616!2.28e-21!49;UBERON:0000073!3.09e-21!75;UBERON:0001016!3.09e-21!75;UBERON:0001017!1.14e-20!73;UBERON:0005743!1.14e-20!73;UBERON:0004121!2.08e-19!102;UBERON:0000924!2.08e-19!102;UBERON:0006601!2.08e-19!102;UBERON:0002020!2.65e-18!34;UBERON:0003056!2.43e-17!49;UBERON:0003080!1.09e-16!40;UBERON:0002780!9.30e-16!39;UBERON:0001890!9.30e-16!39;UBERON:0006240!9.30e-16!39;UBERON:0002791!4.37e-15!29;UBERON:0003528!4.37e-15!29;UBERON:0001893!4.37e-15!29;UBERON:0007811!7.91e-13!86;UBERON:0002021!4.06e-11!10;UBERON:0000411!4.06e-11!10;UBERON:0001950!4.06e-11!10;UBERON:0000153!5.39e-11!94;UBERON:0002619!7.78e-10!17;UBERON:0000956!1.45e-09!21;UBERON:0001869!1.45e-09!21;UBERON:0000203!1.45e-09!21;UBERON:0002420!4.83e-07!8;UBERON:0007245!4.83e-07!8;UBERON:0010009!4.83e-07!8;UBERON:0010011!4.83e-07!8;UBERON:0000454!4.83e-07!8;UBERON:0003076!8.74e-07!12;UBERON:0003057!8.74e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-37,54;UBERON:0001049,2.98e-33,52;UBERON:0005068,2.98e-33,52;UBERON:0006241,2.98e-33,52;UBERON:0007135,2.98e-33,52;UBERON:0000955,2.81e-32,47;UBERON:0006238,2.81e-32,47;UBERON:0002616,2.19e-30,46;UBERON:0001017,3.43e-30,73;UBERON:0001016,3.27e-29,75;UBERON:0002346,6.92e-28,64;UBERON:0003075,6.92e-28,64;UBERON:0007284,6.92e-28,64;UBERON:0002020,6.82e-26,34;UBERON:0002021,9.46e-26,10;UBERON:0000411,9.46e-26,10;UBERON:0001950,9.46e-26,10;UBERON:0003528,2.72e-25,29;UBERON:0002791,2.72e-25,29;UBERON:0001893,2.72e-25,29;UBERON:0003080,1.84e-24,40;UBERON:0010371,1.11e-23,73;UBERON:0004121,2.92e-23,95;UBERON:0000924,2.92e-23,95;UBERON:0006601,2.92e-23,95;UBERON:0002780,1.72e-22,39;UBERON:0001890,1.72e-22,39;UBERON:0006240,1.72e-22,39;UBERON:0003056,5.55e-21,49;UBERON:0010314,1.70e-17,92;UBERON:0002619,2.59e-17,17;UBERON:0000956,2.00e-16,21;UBERON:0001869,2.00e-16,21;UBERON:0000203,2.00e-16,21;UBERON:0000025,7.89e-12,114;UBERON:0004111,1.19e-10,122;UBERON:0002950,2.36e-10,4;UBERON:0001891,2.36e-10,4;UBERON:0009616,2.36e-10,4;UBERON:0010286,2.36e-10,4;UBERON:0002420,3.97e-10,8;UBERON:0007245,3.97e-10,8;UBERON:0010009,3.97e-10,8;UBERON:0010011,3.97e-10,8;UBERON:0000454,3.97e-10,8;UBERON:0003076,5.35e-09,12;UBERON:0003057,5.35e-09,12;UBERON:0004684,1.68e-08,3;UBERON:0002275,1.68e-08,3;UBERON:0002038,8.28e-08,3;UBERON:0009663,8.28e-08,3;UBERON:0009661,8.28e-08,3;UBERON:0000125,8.28e-08,3;UBERON:0002308,8.28e-08,3;UBERON:0011216,3.50e-07,194;UBERON:0004733,5.70e-07,6;UBERON:0004732,5.70e-07,6;UBERON:0002028,5.70e-07,6;UBERON:0007277,5.70e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75945888556019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.441737081903227,0.367472397644862,0.0958454710182364,0,22.0231761998777,37.2847027208748,32.1037654505549,0.131886287730194,0.457438218012048,1.56274011167028,17.0301629390842,16.8828783009504,17.5717984943332,1.76777151284201,1.13897344639282,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,1.40444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0.691846491768175,0,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,41.5748731756397,35.6059401582874,0,0,0,0,46.8844701337095,19.6725259212009,1.50785222535437,53.0164176586443,37.5901722275586,40.9342447782333,28.2299797737898,0,0,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0714626446702,0.411618449517138,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,16.5367107687426,15.4719426301708,0,0,0,0,0,0,0,0,0,0,0,20.2432429345738,0,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.885110557024,26.6988637174163,17.1868654031819,25.9498305338968,45.900528824633,51.3667850224996,35.1011700120539,45.9327627288705,52.1113770331835,49.7049899281747,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.565879024158229,0.187283014939765,0.320125762024346,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Gabra1 | |||
}} |
Revision as of 19:39, 12 September 2013
Short description: | p4@Gabra1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gabra1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -44bp_to_ENSMUST00000153147_5end |
EntrezGene: | Gabra1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.68e-08 | 3 |
neuron of the substantia nigra | 8.28e-08 | 3 |
CNS neuron (sensu Vertebrata) | 5.27e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.27e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.