FFCP PHASE1:Mm9::chr11:87794442..87794459,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68097|HGNC=|UniProt=|association_with_transcript=-104bp_to_uc011yce.1_5end|description=CAGE_peak_6_at_Dynll2_5end|id=chr11:87794442..87794459,-|ontology_enrichment_celltype=CL:0000117!1.56e-10!23;CL:0000337!1.56e-10!23;CL:0000540!1.24e-07!33;CL:0000047!1.24e-07!33;CL:0000031!1.24e-07!33;CL:0000404!1.24e-07!33;CL:0002319!4.52e-07!43;CL:0000221!6.24e-07!44;CL:0000133!6.24e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,5.49e-21,23;CL:0000337,5.49e-21,23;CL:0000540,4.77e-13,33;CL:0000047,4.77e-13,33;CL:0000031,4.77e-13,33;CL:0000404,4.77e-13,33;CL:0002319,2.82e-11,43;CL:0000221,6.77e-11,44;CL:0000133,6.77e-11,44;CL:0000393,2.83e-10,39;CL:0000211,2.83e-10,39;CL:0002610,9.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.57e-17!52;UBERON:0005068!1.57e-17!52;UBERON:0006241!1.57e-17!52;UBERON:0007135!1.57e-17!52;UBERON:0001017!2.82e-17!73;UBERON:0005743!2.82e-17!73;UBERON:0000033!4.46e-17!63;UBERON:0004121!1.00e-16!102;UBERON:0000924!1.00e-16!102;UBERON:0006601!1.00e-16!102;UBERON:0002346!1.86e-16!71;UBERON:0003075!1.86e-16!71;UBERON:0007284!1.86e-16!71;UBERON:0000073!2.95e-16!75;UBERON:0001016!2.95e-16!75;UBERON:0002616!6.31e-16!49;UBERON:0000955!1.01e-15!50;UBERON:0006238!1.01e-15!50;UBERON:0002020!2.75e-14!34;UBERON:0003056!2.29e-13!49;UBERON:0003080!1.62e-12!40;UBERON:0002780!5.15e-12!39;UBERON:0001890!5.15e-12!39;UBERON:0006240!5.15e-12!39;UBERON:0002791!2.40e-11!29;UBERON:0003528!2.40e-11!29;UBERON:0001893!2.40e-11!29;UBERON:0000025!2.18e-09!114;UBERON:0004111!4.68e-09!122;UBERON:0007811!7.75e-09!86;UBERON:0000153!1.60e-07!94;UBERON:0000956!2.42e-07!21;UBERON:0001869!2.42e-07!21;UBERON:0000203!2.42e-07!21;UBERON:0002619!3.65e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-26,54;UBERON:0002020,3.49e-25,34;UBERON:0001049,1.07e-23,52;UBERON:0005068,1.07e-23,52;UBERON:0006241,1.07e-23,52;UBERON:0007135,1.07e-23,52;UBERON:0001017,2.50e-23,73;UBERON:0001016,1.96e-22,75;UBERON:0002346,3.80e-20,64;UBERON:0003075,3.80e-20,64;UBERON:0007284,3.80e-20,64;UBERON:0004121,6.83e-20,95;UBERON:0000924,6.83e-20,95;UBERON:0006601,6.83e-20,95;UBERON:0003528,2.20e-18,29;UBERON:0002791,2.20e-18,29;UBERON:0001893,2.20e-18,29;UBERON:0010371,1.02e-17,73;UBERON:0002616,2.18e-16,46;UBERON:0003080,2.70e-16,40;UBERON:0000955,6.84e-16,47;UBERON:0006238,6.84e-16,47;UBERON:0010314,2.74e-15,92;UBERON:0002780,2.95e-15,39;UBERON:0001890,2.95e-15,39;UBERON:0006240,2.95e-15,39;UBERON:0003056,1.80e-14,49;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0000956,3.34e-12,21;UBERON:0001869,3.34e-12,21;UBERON:0000203,3.34e-12,21;UBERON:0002619,2.03e-11,17;UBERON:0000025,6.06e-11,114;UBERON:0004111,2.32e-10,122;UBERON:0002240,2.46e-10,6;UBERON:0005174,2.46e-10,6;UBERON:0001137,2.46e-10,6;UBERON:0001948,1.00e-08,5;UBERON:0002315,1.00e-08,5;UBERON:0003076,3.70e-08,12;UBERON:0003057,3.70e-08,12;UBERON:0002950,7.39e-08,4;UBERON:0001891,7.39e-08,4;UBERON:0009616,7.39e-08,4;UBERON:0010286,7.39e-08,4;UBERON:0002420,1.61e-07,8;UBERON:0007245,1.61e-07,8;UBERON:0010009,1.61e-07,8;UBERON:0010011,1.61e-07,8;UBERON:0000454,1.61e-07,8;UBERON:0004684,9.16e-07,3;UBERON:0002275,9.16e-07,3|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0,0.570070258369122,0,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,0.782391344348039,0.436050312760893,0.439372365468944,1.1665793944457,0.279972843250725,0,0,0,0.336093799142464,0.771778308107841,0,0,0.404632921719196,1.5869729378161,1.90149421051854,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0.299600110518405,2.30530983192933,0.518448061542388,2.43010688997043,0,1.99955689082663,1.98781686856452,0.244981598429908,0.958454710182364,1.83843757322004,6.60695285996332,6.38436690425939,6.29786786350598,1.31886287730194,2.56165402086747,1.56274011167028,6.42120897703176,5.06486349028512,5.34793867218835,3.24091444021034,2.27794689278565,1.86399445825301,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,2.69851595818909,0.649776417447669,0,1.12355536105401,0.340860645156116,2.33807404142582,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.45673551887624,0,0.593768556259299,0.520455980298408,0,0.230615497256059,0.301445281105245,0.352766121407114,0.628332956648377,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0.292780797011547,0.628340120440365,0.766371165625774,0.11981512450592,0,0.127070227073065,1.64769703345305,0.915001205637253,0.753926112677186,1.56441888173049,2.04572365864264,2.28566849015516,0.973447578406546,0.101839363850316,0,0,0.841767423545896,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.408218994907967,0.384341160854549,1.0307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| ||
|EntrezGene=68097 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-104bp_to_uc011yce.1_5end | |||
|description=CAGE_peak_6_at_Dynll2_5end | |||
|id=chr11:87794442..87794459,- | |||
|ontology_enrichment_celltype=CL:0000117!1.56e-10!23;CL:0000337!1.56e-10!23;CL:0000540!1.24e-07!33;CL:0000047!1.24e-07!33;CL:0000031!1.24e-07!33;CL:0000404!1.24e-07!33;CL:0002319!4.52e-07!43;CL:0000221!6.24e-07!44;CL:0000133!6.24e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.49e-21,23;CL:0000337,5.49e-21,23;CL:0000540,4.77e-13,33;CL:0000047,4.77e-13,33;CL:0000031,4.77e-13,33;CL:0000404,4.77e-13,33;CL:0002319,2.82e-11,43;CL:0000221,6.77e-11,44;CL:0000133,6.77e-11,44;CL:0000393,2.83e-10,39;CL:0000211,2.83e-10,39;CL:0002610,9.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-17!52;UBERON:0005068!1.57e-17!52;UBERON:0006241!1.57e-17!52;UBERON:0007135!1.57e-17!52;UBERON:0001017!2.82e-17!73;UBERON:0005743!2.82e-17!73;UBERON:0000033!4.46e-17!63;UBERON:0004121!1.00e-16!102;UBERON:0000924!1.00e-16!102;UBERON:0006601!1.00e-16!102;UBERON:0002346!1.86e-16!71;UBERON:0003075!1.86e-16!71;UBERON:0007284!1.86e-16!71;UBERON:0000073!2.95e-16!75;UBERON:0001016!2.95e-16!75;UBERON:0002616!6.31e-16!49;UBERON:0000955!1.01e-15!50;UBERON:0006238!1.01e-15!50;UBERON:0002020!2.75e-14!34;UBERON:0003056!2.29e-13!49;UBERON:0003080!1.62e-12!40;UBERON:0002780!5.15e-12!39;UBERON:0001890!5.15e-12!39;UBERON:0006240!5.15e-12!39;UBERON:0002791!2.40e-11!29;UBERON:0003528!2.40e-11!29;UBERON:0001893!2.40e-11!29;UBERON:0000025!2.18e-09!114;UBERON:0004111!4.68e-09!122;UBERON:0007811!7.75e-09!86;UBERON:0000153!1.60e-07!94;UBERON:0000956!2.42e-07!21;UBERON:0001869!2.42e-07!21;UBERON:0000203!2.42e-07!21;UBERON:0002619!3.65e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-26,54;UBERON:0002020,3.49e-25,34;UBERON:0001049,1.07e-23,52;UBERON:0005068,1.07e-23,52;UBERON:0006241,1.07e-23,52;UBERON:0007135,1.07e-23,52;UBERON:0001017,2.50e-23,73;UBERON:0001016,1.96e-22,75;UBERON:0002346,3.80e-20,64;UBERON:0003075,3.80e-20,64;UBERON:0007284,3.80e-20,64;UBERON:0004121,6.83e-20,95;UBERON:0000924,6.83e-20,95;UBERON:0006601,6.83e-20,95;UBERON:0003528,2.20e-18,29;UBERON:0002791,2.20e-18,29;UBERON:0001893,2.20e-18,29;UBERON:0010371,1.02e-17,73;UBERON:0002616,2.18e-16,46;UBERON:0003080,2.70e-16,40;UBERON:0000955,6.84e-16,47;UBERON:0006238,6.84e-16,47;UBERON:0010314,2.74e-15,92;UBERON:0002780,2.95e-15,39;UBERON:0001890,2.95e-15,39;UBERON:0006240,2.95e-15,39;UBERON:0003056,1.80e-14,49;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0000956,3.34e-12,21;UBERON:0001869,3.34e-12,21;UBERON:0000203,3.34e-12,21;UBERON:0002619,2.03e-11,17;UBERON:0000025,6.06e-11,114;UBERON:0004111,2.32e-10,122;UBERON:0002240,2.46e-10,6;UBERON:0005174,2.46e-10,6;UBERON:0001137,2.46e-10,6;UBERON:0001948,1.00e-08,5;UBERON:0002315,1.00e-08,5;UBERON:0003076,3.70e-08,12;UBERON:0003057,3.70e-08,12;UBERON:0002950,7.39e-08,4;UBERON:0001891,7.39e-08,4;UBERON:0009616,7.39e-08,4;UBERON:0010286,7.39e-08,4;UBERON:0002420,1.61e-07,8;UBERON:0007245,1.61e-07,8;UBERON:0010009,1.61e-07,8;UBERON:0010011,1.61e-07,8;UBERON:0000454,1.61e-07,8;UBERON:0004684,9.16e-07,3;UBERON:0002275,9.16e-07,3 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0,0.570070258369122,0,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,0.782391344348039,0.436050312760893,0.439372365468944,1.1665793944457,0.279972843250725,0,0,0,0.336093799142464,0.771778308107841,0,0,0.404632921719196,1.5869729378161,1.90149421051854,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0.299600110518405,2.30530983192933,0.518448061542388,2.43010688997043,0,1.99955689082663,1.98781686856452,0.244981598429908,0.958454710182364,1.83843757322004,6.60695285996332,6.38436690425939,6.29786786350598,1.31886287730194,2.56165402086747,1.56274011167028,6.42120897703176,5.06486349028512,5.34793867218835,3.24091444021034,2.27794689278565,1.86399445825301,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,2.69851595818909,0.649776417447669,0,1.12355536105401,0.340860645156116,2.33807404142582,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.45673551887624,0,0.593768556259299,0.520455980298408,0,0.230615497256059,0.301445281105245,0.352766121407114,0.628332956648377,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0.292780797011547,0.628340120440365,0.766371165625774,0.11981512450592,0,0.127070227073065,1.64769703345305,0.915001205637253,0.753926112677186,1.56441888173049,2.04572365864264,2.28566849015516,0.973447578406546,0.101839363850316,0,0,0.841767423545896,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.408218994907967,0.384341160854549,1.03071897015702,1.03481348295606,0.862271971731369,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0.23674473558521,0.983821158737019,0.308534225774757,1.62773761325285,1.3413670069981,0.350296027101508,0.329119699826961,0.32833492815819,0.486412857275134,1.75439984910399,1.09775057645525,0.536825675041487,0.210289948564127,1.13195073617213,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0.995706366271836,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.280543279561274,0.316182685621286,0.147610147979602,0.784993639206874,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0,8.62609239164127,0,0.312037673114561,0.757736633841335,0.538192240565737,0,0.184753190166605,0,0.651859905768103,0.509235257325564,0.938760993154008,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.159454768657487,0.491589944147214,0.863424909329478,0,0,1.63171705145613,0.983528546038072,1.10374698521893,1.76605648986571,2.34423373184406,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.283880170416537,0.534196811001766,0,0.164970122972535,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.680879211507576,0.36012218806262,0.646793418913773,1.28602221018955,0.177340233642274,0.178368817602071,0.822745103010605,0.304464949114599,0.23467170806371,1.0591603543191,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.328281799490123,1.1659233465194,2.96680483216816,0.170870880797853,0.412773735926445,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0.474503990371703,0,0.648032044930808,0.627264888043406,0,0.269728692769641,0.330613822901344,0.785267825952089,0.259229946583586,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.13020438484395,0.419437377702843,1.20792060413003,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,0.129920822977795,0.179026695667481,0.993406773906324,0.360586348559907,0,0,0.15241361331,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0.453460767230423,0.221985953374065,0.269141569828427,0,0.386379188064381,0.375364950902364,0,0,0,1.12950368523413,1.84130094602871,2.86447756719698,1.71853182343688,0.685082519770642,3.7769694869485,2.70009000092722,2.2516060161211,1.81256963593682,2.5888015587591,0.830298780673413,0,0.512200817262403,0.729320151204882,0.209613162627982,0,0.44449345560323,0.618105171716683,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.402048282689293,1.42888107384922,0.231768651889711,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.169229215783353,0.18292797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| |||
|short_description=p6@Dynll2 | |||
}} |
Revision as of 21:23, 12 September 2013
Short description: | p6@Dynll2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dynll2_5end |
Coexpression cluster: | NA |
Association with transcript: | -104bp_to_uc011yce.1_5end |
EntrezGene: | Dynll2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.49e-21 | 23 |
neuroblast (sensu Vertebrata) | 5.49e-21 | 23 |
neuron | 4.77e-13 | 33 |
neuronal stem cell | 4.77e-13 | 33 |
neuroblast | 4.77e-13 | 33 |
electrically signaling cell | 4.77e-13 | 33 |
neural cell | 2.82e-11 | 43 |
ectodermal cell | 6.77e-11 | 44 |
neurectodermal cell | 6.77e-11 | 44 |
electrically responsive cell | 2.83e-10 | 39 |
electrically active cell | 2.83e-10 | 39 |
raphe nuclei neuron | 9.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.