FFCP PHASE1:Mm9::chr12:106692245..106692257,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268595|HGNC=|MCL_coexpression_id=90|UniProt=|association_with_transcript=59bp_to_NR_015481,uc007oyj.2_5end|description=CAGE_peak_3_at_D430019H16Rik_5end|id=chr12:106692245..106692257,+|ontology_enrichment_celltype=CL:0000117!3.61e-10!23;CL:0000337!3.61e-10!23;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33|ontology_enrichment_celltype_v019_2=CL:0002613,2.01e-08,3;CL:0000117,6.96e-08,23;CL:0000337,6.96e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-24!71;UBERON:0003075!1.73e-24!71;UBERON:0007284!1.73e-24!71;UBERON:0003080!2.62e-21!40;UBERON:0000955!5.26e-21!50;UBERON:0006238!5.26e-21!50;UBERON:0003056!6.74e-21!49;UBERON:0001049!7.87e-21!52;UBERON:0005068!7.87e-21!52;UBERON:0006241!7.87e-21!52;UBERON:0007135!7.87e-21!52;UBERON:0002780!1.61e-20!39;UBERON:0001890!1.61e-20!39;UBERON:0006240!1.61e-20!39;UBERON:0004121!1.89e-20!102;UBERON:0000924!1.89e-20!102;UBERON:0006601!1.89e-20!102;UBERON:0002616!2.89e-20!49;UBERON:0002020!5.15e-20!34;UBERON:0001017!8.72e-20!73;UBERON:0005743!8.72e-20!73;UBERON:0000073!1.72e-19!75;UBERON:0001016!1.72e-19!75;UBERON:0002791!2.19e-19!29;UBERON:0003528!2.19e-19!29;UBERON:0001893!2.19e-19!29;UBERON:0000033!4.99e-19!63;UBERON:0000956!1.71e-13!21;UBERON:0001869!1.71e-13!21;UBERON:0000203!1.71e-13!21;UBERON:0002619!3.92e-11!17;UBERON:0007811!8.09e-10!86;UBERON:0002021!5.48e-09!10;UBERON:0000411!5.48e-09!10;UBERON:0001950!5.48e-09!10;UBERON:0000153!2.72e-08!94;UBERON:0002420!4.05e-07!8;UBERON:0007245!4.05e-07!8;UBERON:0010009!4.05e-07!8;UBERON:0010011!4.05e-07!8;UBERON:0000454!4.05e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.73e-37,40;UBERON:0000955,6.51e-37,47;UBERON:0006238,6.51e-37,47;UBERON:0002780,3.33e-35,39;UBERON:0001890,3.33e-35,39;UBERON:0006240,3.33e-35,39;UBERON:0002616,8.50e-35,46;UBERON:0000073,5.33e-34,54;UBERON:0001049,9.32e-33,52;UBERON:0005068,9.32e-33,52;UBERON:0006241,9.32e-33,52;UBERON:0007135,9.32e-33,52;UBERON:0003528,1.55e-32,29;UBERON:0002791,1.55e-32,29;UBERON:0001893,1.55e-32,29;UBERON:0002020,4.45e-30,34;UBERON:0001017,4.92e-30,73;UBERON:0003056,1.12e-29,49;UBERON:0001016,4.38e-29,75;UBERON:0002346,1.27e-25,64;UBERON:0003075,1.27e-25,64;UBERON:0007284,1.27e-25,64;UBERON:0002021,1.04e-22,10;UBERON:0000411,1.04e-22,10;UBERON:0001950,1.04e-22,10;UBERON:0010371,8.30e-22,73;UBERON:0004121,8.91e-22,95;UBERON:0000924,8.91e-22,95;UBERON:0006601,8.91e-22,95;UBERON:0002619,2.80e-19,17;UBERON:0000956,2.78e-18,21;UBERON:0001869,2.78e-18,21;UBERON:0000203,2.78e-18,21;UBERON:0002420,2.50e-16,8;UBERON:0007245,2.50e-16,8;UBERON:0010009,2.50e-16,8;UBERON:0010011,2.50e-16,8;UBERON:0000454,2.50e-16,8;UBERON:0010314,3.40e-16,92;UBERON:0000369,9.51e-14,5;UBERON:0002435,9.51e-14,5;UBERON:0000204,9.51e-14,5;UBERON:0010082,9.51e-14,5;UBERON:0000025,5.01e-12,114;UBERON:0004111,7.00e-11,122;UBERON:0011216,1.11e-07,194;UBERON:0002950,5.75e-07,4;UBERON:0001891,5.75e-07,4;UBERON:0009616,5.75e-07,4;UBERON:0010286,5.75e-07,4|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.675029691658453,0.841299845405528,0.856952953211411,0.220868540951614,0.979926393719632,0.958454710182364,0.919218786610021,0,1.53224805702225,0.921639199537461,1.31886287730194,1.82975287204819,1.04182674111352,0.837548997004143,1.68828783009504,2.44477196442896,0,0.427115042397309,1.3047961207771,0,0.302286240427142,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,0.376999773989026,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,1.9472783122627,9.15001205637253,1.63350657746724,3.47648640384553,3.06858548796397,2.70124457927428,3.40706652442291,0.305518091550949,0,0,0,0.260240885925407,0,0,0.60281927134286,0.408218994907967,0.384341160854549,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.134206418760372,4.41608891984667,2.6755199218614,0,0,0,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0,0.321101179975584,1.40654023910644,0,0,0,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0,0.809621403349789,0,0,1.60660658210904,0.283880170416537,0,0.162886959353576,0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| ||
|EntrezGene=268595 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt= | |||
|association_with_transcript=59bp_to_NR_015481,uc007oyj.2_5end | |||
|description=CAGE_peak_3_at_D430019H16Rik_5end | |||
|id=chr12:106692245..106692257,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.61e-10!23;CL:0000337!3.61e-10!23;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.01e-08,3;CL:0000117,6.96e-08,23;CL:0000337,6.96e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-24!71;UBERON:0003075!1.73e-24!71;UBERON:0007284!1.73e-24!71;UBERON:0003080!2.62e-21!40;UBERON:0000955!5.26e-21!50;UBERON:0006238!5.26e-21!50;UBERON:0003056!6.74e-21!49;UBERON:0001049!7.87e-21!52;UBERON:0005068!7.87e-21!52;UBERON:0006241!7.87e-21!52;UBERON:0007135!7.87e-21!52;UBERON:0002780!1.61e-20!39;UBERON:0001890!1.61e-20!39;UBERON:0006240!1.61e-20!39;UBERON:0004121!1.89e-20!102;UBERON:0000924!1.89e-20!102;UBERON:0006601!1.89e-20!102;UBERON:0002616!2.89e-20!49;UBERON:0002020!5.15e-20!34;UBERON:0001017!8.72e-20!73;UBERON:0005743!8.72e-20!73;UBERON:0000073!1.72e-19!75;UBERON:0001016!1.72e-19!75;UBERON:0002791!2.19e-19!29;UBERON:0003528!2.19e-19!29;UBERON:0001893!2.19e-19!29;UBERON:0000033!4.99e-19!63;UBERON:0000956!1.71e-13!21;UBERON:0001869!1.71e-13!21;UBERON:0000203!1.71e-13!21;UBERON:0002619!3.92e-11!17;UBERON:0007811!8.09e-10!86;UBERON:0002021!5.48e-09!10;UBERON:0000411!5.48e-09!10;UBERON:0001950!5.48e-09!10;UBERON:0000153!2.72e-08!94;UBERON:0002420!4.05e-07!8;UBERON:0007245!4.05e-07!8;UBERON:0010009!4.05e-07!8;UBERON:0010011!4.05e-07!8;UBERON:0000454!4.05e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.73e-37,40;UBERON:0000955,6.51e-37,47;UBERON:0006238,6.51e-37,47;UBERON:0002780,3.33e-35,39;UBERON:0001890,3.33e-35,39;UBERON:0006240,3.33e-35,39;UBERON:0002616,8.50e-35,46;UBERON:0000073,5.33e-34,54;UBERON:0001049,9.32e-33,52;UBERON:0005068,9.32e-33,52;UBERON:0006241,9.32e-33,52;UBERON:0007135,9.32e-33,52;UBERON:0003528,1.55e-32,29;UBERON:0002791,1.55e-32,29;UBERON:0001893,1.55e-32,29;UBERON:0002020,4.45e-30,34;UBERON:0001017,4.92e-30,73;UBERON:0003056,1.12e-29,49;UBERON:0001016,4.38e-29,75;UBERON:0002346,1.27e-25,64;UBERON:0003075,1.27e-25,64;UBERON:0007284,1.27e-25,64;UBERON:0002021,1.04e-22,10;UBERON:0000411,1.04e-22,10;UBERON:0001950,1.04e-22,10;UBERON:0010371,8.30e-22,73;UBERON:0004121,8.91e-22,95;UBERON:0000924,8.91e-22,95;UBERON:0006601,8.91e-22,95;UBERON:0002619,2.80e-19,17;UBERON:0000956,2.78e-18,21;UBERON:0001869,2.78e-18,21;UBERON:0000203,2.78e-18,21;UBERON:0002420,2.50e-16,8;UBERON:0007245,2.50e-16,8;UBERON:0010009,2.50e-16,8;UBERON:0010011,2.50e-16,8;UBERON:0000454,2.50e-16,8;UBERON:0010314,3.40e-16,92;UBERON:0000369,9.51e-14,5;UBERON:0002435,9.51e-14,5;UBERON:0000204,9.51e-14,5;UBERON:0010082,9.51e-14,5;UBERON:0000025,5.01e-12,114;UBERON:0004111,7.00e-11,122;UBERON:0011216,1.11e-07,194;UBERON:0002950,5.75e-07,4;UBERON:0001891,5.75e-07,4;UBERON:0009616,5.75e-07,4;UBERON:0010286,5.75e-07,4 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.675029691658453,0.841299845405528,0.856952953211411,0.220868540951614,0.979926393719632,0.958454710182364,0.919218786610021,0,1.53224805702225,0.921639199537461,1.31886287730194,1.82975287204819,1.04182674111352,0.837548997004143,1.68828783009504,2.44477196442896,0,0.427115042397309,1.3047961207771,0,0.302286240427142,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,0.376999773989026,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,1.9472783122627,9.15001205637253,1.63350657746724,3.47648640384553,3.06858548796397,2.70124457927428,3.40706652442291,0.305518091550949,0,0,0,0.260240885925407,0,0,0.60281927134286,0.408218994907967,0.384341160854549,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.134206418760372,4.41608891984667,2.6755199218614,0,0,0,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0,0.321101179975584,1.40654023910644,0,0,0,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0,0.809621403349789,0,0,1.60660658210904,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,1.8267896946876,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0.194451188344048,0.387479470433193,0,0.821500670520278,0,0.524296722128554,0.724752362478018,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.915758121336325,0,0,6.21227026878773,2.76195141904306,2.29158205375759,3.95262319390481,1.37016503954128,0.755393897389701,4.72515750162264,1.35096360967266,3.17199686288943,2.07104124700728,0.207574695168353,0,0,0.243106717068294,0,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.37456602987953,0.320125762024346,0.0574354689556133,0.476293691283074,0.115884325944855,0.77163688185482,0.824171801606613,0,0,0,0.715308569841963,0.436039249896986,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0,0.749431733813838,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p3@D430019H16Rik | |||
}} |
Revision as of 22:06, 12 September 2013
Short description: | p3@D430019H16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_D430019H16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 59bp_to_NR_015481, uc007oyj.2_5end |
EntrezGene: | D430019H16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.01e-08 | 3 |
CNS neuron (sensu Vertebrata) | 6.96e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.96e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.