FFCP PHASE1:Mm9::chr13:100192810..100192822,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100192810..100192822,-|id=chr13:100192810..100192822,-|ontology_enrichment_celltype=CL:0000117!5.21e-15!23;CL:0000337!5.21e-15!23;CL:0000540!8.04e-14!33;CL:0000047!8.04e-14!33;CL:0000031!8.04e-14!33;CL:0000404!8.04e-14!33;CL:0000393!4.76e-11!39;CL:0000211!4.76e-11!39;CL:0002319!6.32e-10!43;CL:0000221!8.46e-10!44;CL:0000133!8.46e-10!44;CL:0000055!9.05e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-24,23;CL:0000337,2.71e-24,23;CL:0000540,3.88e-15,33;CL:0000047,3.88e-15,33;CL:0000031,3.88e-15,33;CL:0000404,3.88e-15,33;CL:0000393,6.20e-12,39;CL:0000211,6.20e-12,39;CL:0002319,2.61e-10,43;CL:0000221,5.94e-10,44;CL:0000133,5.94e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.72e-27!75;UBERON:0001016!1.72e-27!75;UBERON:0001017!4.37e-27!73;UBERON:0005743!4.37e-27!73;UBERON:0002346!2.56e-26!71;UBERON:0003075!2.56e-26!71;UBERON:0007284!2.56e-26!71;UBERON:0001049!3.87e-25!52;UBERON:0005068!3.87e-25!52;UBERON:0006241!3.87e-25!52;UBERON:0007135!3.87e-25!52;UBERON:0000955!2.04e-23!50;UBERON:0006238!2.04e-23!50;UBERON:0004121!2.57e-23!102;UBERON:0000924!2.57e-23!102;UBERON:0006601!2.57e-23!102;UBERON:0000033!3.43e-23!63;UBERON:0002616!7.20e-23!49;UBERON:0003056!9.02e-22!49;UBERON:0003080!2.44e-19!40;UBERON:0002780!7.77e-19!39;UBERON:0001890!7.77e-19!39;UBERON:0006240!7.77e-19!39;UBERON:0002020!9.24e-19!34;UBERON:0002791!1.17e-15!29;UBERON:0003528!1.17e-15!29;UBERON:0001893!1.17e-15!29;UBERON:0000956!8.86e-11!21;UBERON:0001869!8.86e-11!21;UBERON:0000203!8.86e-11!21;UBERON:0007811!1.11e-10!86;UBERON:0000153!1.78e-09!94;UBERON:0002619!2.70e-08!17;UBERON:0002021!1.57e-07!10;UBERON:0000411!1.57e-07!10;UBERON:0001950!1.57e-07!10;UBERON:0000025!7.37e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.79e-37,54;UBERON:0001049,3.64e-35,52;UBERON:0005068,3.64e-35,52;UBERON:0006241,3.64e-35,52;UBERON:0007135,3.64e-35,52;UBERON:0002020,2.31e-34,34;UBERON:0001017,7.96e-34,73;UBERON:0001016,1.33e-32,75;UBERON:0002346,8.32e-30,64;UBERON:0003075,8.32e-30,64;UBERON:0007284,8.32e-30,64;UBERON:0000955,8.71e-30,47;UBERON:0006238,8.71e-30,47;UBERON:0003528,1.26e-29,29;UBERON:0002791,1.26e-29,29;UBERON:0001893,1.26e-29,29;UBERON:0002616,1.00e-28,46;UBERON:0004121,8.42e-26,95;UBERON:0000924,8.42e-26,95;UBERON:0006601,8.42e-26,95;UBERON:0003080,4.20e-25,40;UBERON:0010371,9.00e-25,73;UBERON:0002780,4.15e-24,39;UBERON:0001890,4.15e-24,39;UBERON:0006240,4.15e-24,39;UBERON:0003056,4.88e-22,49;UBERON:0000956,6.55e-21,21;UBERON:0001869,6.55e-21,21;UBERON:0000203,6.55e-21,21;UBERON:0010314,2.07e-17,92;UBERON:0002619,1.30e-15,17;UBERON:0002021,2.37e-14,10;UBERON:0000411,2.37e-14,10;UBERON:0001950,2.37e-14,10;UBERON:0000025,2.06e-10,114;UBERON:0003076,3.26e-10,12;UBERON:0003057,3.26e-10,12;UBERON:0002420,1.09e-09,8;UBERON:0007245,1.09e-09,8;UBERON:0010009,1.09e-09,8;UBERON:0010011,1.09e-09,8;UBERON:0000454,1.09e-09,8;UBERON:0004111,4.31e-09,122;UBERON:0000369,1.32e-08,5;UBERON:0002435,1.32e-08,5;UBERON:0000204,1.32e-08,5;UBERON:0010082,1.32e-08,5;UBERON:0002240,2.38e-07,6;UBERON:0005174,2.38e-07,6;UBERON:0001137,2.38e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,2.42779753031517,5.81890077199236,1.90149421051854,0,0.889294796111139,0,0,0,0,0,1.8664130215526,1.75507719831198,2.52389953621658,1.42825492201902,0.662605622854841,0.979926393719632,2.49198224647415,1.83843757322004,2.20231761998777,1.14918604276669,1.84327839907492,2.2420668914133,4.39140689291566,2.08365348222704,1.95428099300967,0.56276261003168,2.29197371665215,6.18720029494702,4.55589378557129,2.23679334990361,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,2.92780797011547,1.04723353406728,0,0,0,0,1.19832511523858,1.83000241127451,3.26701315493447,2.78118912307642,1.27857728665165,2.70124457927428,1.78465389374533,0.203678727700633,0,0,0.210441855886474,0.780722657776222,0.229902104433473,0.900310649026746,1.50704817835715,0.95251098811859,0.640568601424249,0.374806898238915,1.03481348295606,0,0.189106080167819,0,1.09597866213787,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0.439100230582101,0,1.47202963994889,5.35103984372279,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100192810..100192822,- | |||
|id=chr13:100192810..100192822,- | |||
|ontology_enrichment_celltype=CL:0000117!5.21e-15!23;CL:0000337!5.21e-15!23;CL:0000540!8.04e-14!33;CL:0000047!8.04e-14!33;CL:0000031!8.04e-14!33;CL:0000404!8.04e-14!33;CL:0000393!4.76e-11!39;CL:0000211!4.76e-11!39;CL:0002319!6.32e-10!43;CL:0000221!8.46e-10!44;CL:0000133!8.46e-10!44;CL:0000055!9.05e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-24,23;CL:0000337,2.71e-24,23;CL:0000540,3.88e-15,33;CL:0000047,3.88e-15,33;CL:0000031,3.88e-15,33;CL:0000404,3.88e-15,33;CL:0000393,6.20e-12,39;CL:0000211,6.20e-12,39;CL:0002319,2.61e-10,43;CL:0000221,5.94e-10,44;CL:0000133,5.94e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-27!75;UBERON:0001016!1.72e-27!75;UBERON:0001017!4.37e-27!73;UBERON:0005743!4.37e-27!73;UBERON:0002346!2.56e-26!71;UBERON:0003075!2.56e-26!71;UBERON:0007284!2.56e-26!71;UBERON:0001049!3.87e-25!52;UBERON:0005068!3.87e-25!52;UBERON:0006241!3.87e-25!52;UBERON:0007135!3.87e-25!52;UBERON:0000955!2.04e-23!50;UBERON:0006238!2.04e-23!50;UBERON:0004121!2.57e-23!102;UBERON:0000924!2.57e-23!102;UBERON:0006601!2.57e-23!102;UBERON:0000033!3.43e-23!63;UBERON:0002616!7.20e-23!49;UBERON:0003056!9.02e-22!49;UBERON:0003080!2.44e-19!40;UBERON:0002780!7.77e-19!39;UBERON:0001890!7.77e-19!39;UBERON:0006240!7.77e-19!39;UBERON:0002020!9.24e-19!34;UBERON:0002791!1.17e-15!29;UBERON:0003528!1.17e-15!29;UBERON:0001893!1.17e-15!29;UBERON:0000956!8.86e-11!21;UBERON:0001869!8.86e-11!21;UBERON:0000203!8.86e-11!21;UBERON:0007811!1.11e-10!86;UBERON:0000153!1.78e-09!94;UBERON:0002619!2.70e-08!17;UBERON:0002021!1.57e-07!10;UBERON:0000411!1.57e-07!10;UBERON:0001950!1.57e-07!10;UBERON:0000025!7.37e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.79e-37,54;UBERON:0001049,3.64e-35,52;UBERON:0005068,3.64e-35,52;UBERON:0006241,3.64e-35,52;UBERON:0007135,3.64e-35,52;UBERON:0002020,2.31e-34,34;UBERON:0001017,7.96e-34,73;UBERON:0001016,1.33e-32,75;UBERON:0002346,8.32e-30,64;UBERON:0003075,8.32e-30,64;UBERON:0007284,8.32e-30,64;UBERON:0000955,8.71e-30,47;UBERON:0006238,8.71e-30,47;UBERON:0003528,1.26e-29,29;UBERON:0002791,1.26e-29,29;UBERON:0001893,1.26e-29,29;UBERON:0002616,1.00e-28,46;UBERON:0004121,8.42e-26,95;UBERON:0000924,8.42e-26,95;UBERON:0006601,8.42e-26,95;UBERON:0003080,4.20e-25,40;UBERON:0010371,9.00e-25,73;UBERON:0002780,4.15e-24,39;UBERON:0001890,4.15e-24,39;UBERON:0006240,4.15e-24,39;UBERON:0003056,4.88e-22,49;UBERON:0000956,6.55e-21,21;UBERON:0001869,6.55e-21,21;UBERON:0000203,6.55e-21,21;UBERON:0010314,2.07e-17,92;UBERON:0002619,1.30e-15,17;UBERON:0002021,2.37e-14,10;UBERON:0000411,2.37e-14,10;UBERON:0001950,2.37e-14,10;UBERON:0000025,2.06e-10,114;UBERON:0003076,3.26e-10,12;UBERON:0003057,3.26e-10,12;UBERON:0002420,1.09e-09,8;UBERON:0007245,1.09e-09,8;UBERON:0010009,1.09e-09,8;UBERON:0010011,1.09e-09,8;UBERON:0000454,1.09e-09,8;UBERON:0004111,4.31e-09,122;UBERON:0000369,1.32e-08,5;UBERON:0002435,1.32e-08,5;UBERON:0000204,1.32e-08,5;UBERON:0010082,1.32e-08,5;UBERON:0002240,2.38e-07,6;UBERON:0005174,2.38e-07,6;UBERON:0001137,2.38e-07,6 | |||
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|short_description=p@chr13:100192810..100192822,- | |||
}} |
Revision as of 23:39, 12 September 2013
Short description: | p@chr13:100192810..100192822, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100192810..100192822, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.71e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-24 | 23 |
neuron | 3.88e-15 | 33 |
neuronal stem cell | 3.88e-15 | 33 |
neuroblast | 3.88e-15 | 33 |
electrically signaling cell | 3.88e-15 | 33 |
electrically responsive cell | 6.20e-12 | 39 |
electrically active cell | 6.20e-12 | 39 |
neural cell | 2.61e-10 | 43 |
ectodermal cell | 5.94e-10 | 44 |
neurectodermal cell | 5.94e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.