FFCP PHASE1:Mm9::chr14:65207115..65207126,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=392|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:65207115..65207126,+|id=chr14:65207115..65207126,+|ontology_enrichment_celltype=CL:0000117!9.16e-35!23;CL:0000337!9.16e-35!23;CL:0000540!5.12e-24!33;CL:0000047!5.12e-24!33;CL:0000031!5.12e-24!33;CL:0000404!5.12e-24!33;CL:0002319!1.18e-19!43;CL:0000393!3.62e-19!39;CL:0000211!3.62e-19!39;CL:0000221!5.00e-19!44;CL:0000133!5.00e-19!44;CL:0000055!8.32e-16!50;CL:0002609!5.41e-11!6;CL:0002321!3.61e-09!70;CL:0000220!3.61e-09!70|ontology_enrichment_celltype_v019_2=CL:0000117,7.42e-45,23;CL:0000337,7.42e-45,23;CL:0000540,2.40e-30,33;CL:0000047,2.40e-30,33;CL:0000031,2.40e-30,33;CL:0000404,2.40e-30,33;CL:0000393,3.32e-25,39;CL:0000211,3.32e-25,39;CL:0002609,1.57e-23,6;CL:0002319,1.42e-22,43;CL:0000221,5.46e-22,44;CL:0000133,5.46e-22,44;CL:0002608,9.65e-13,3;CL:0002321,1.19e-12,70;CL:0000120,2.54e-12,3;CL:0000723,5.40e-09,91;CL:0000048,5.40e-09,91;CL:0000034,3.07e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.05e-37!34;UBERON:0002791!6.66e-30!29;UBERON:0003528!6.66e-30!29;UBERON:0001893!6.66e-30!29;UBERON:0000073!7.19e-30!75;UBERON:0001016!7.19e-30!75;UBERON:0001017!1.51e-29!73;UBERON:0005743!1.51e-29!73;UBERON:0002346!1.02e-28!71;UBERON:0003075!1.02e-28!71;UBERON:0007284!1.02e-28!71;UBERON:0004121!1.29e-28!102;UBERON:0000924!1.29e-28!102;UBERON:0006601!1.29e-28!102;UBERON:0000033!2.26e-28!63;UBERON:0003056!1.31e-26!49;UBERON:0001049!5.82e-26!52;UBERON:0005068!5.82e-26!52;UBERON:0006241!5.82e-26!52;UBERON:0007135!5.82e-26!52;UBERON:0000955!2.43e-25!50;UBERON:0006238!2.43e-25!50;UBERON:0002616!3.39e-24!49;UBERON:0002780!6.78e-22!39;UBERON:0001890!6.78e-22!39;UBERON:0006240!6.78e-22!39;UBERON:0000956!7.97e-22!21;UBERON:0001869!7.97e-22!21;UBERON:0000203!7.97e-22!21;UBERON:0003080!3.77e-21!40;UBERON:0007811!7.65e-18!86;UBERON:0002619!4.88e-16!17;UBERON:0000153!2.08e-15!94;UBERON:0002021!5.04e-12!10;UBERON:0000411!5.04e-12!10;UBERON:0001950!5.04e-12!10;UBERON:0002420!4.84e-09!8;UBERON:0007245!4.84e-09!8;UBERON:0010009!4.84e-09!8;UBERON:0010011!4.84e-09!8;UBERON:0000454!4.84e-09!8;UBERON:0001948!4.35e-08!5;UBERON:0002315!4.35e-08!5;UBERON:0000025!7.44e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.32e-33,34;UBERON:0003528,1.79e-30,29;UBERON:0002791,1.79e-30,29;UBERON:0001893,1.79e-30,29;UBERON:0000073,4.58e-27,54;UBERON:0001017,4.30e-26,73;UBERON:0001016,2.67e-25,75;UBERON:0000956,3.76e-24,21;UBERON:0001869,3.76e-24,21;UBERON:0000203,3.76e-24,21;UBERON:0001049,8.39e-23,52;UBERON:0005068,8.39e-23,52;UBERON:0006241,8.39e-23,52;UBERON:0007135,8.39e-23,52;UBERON:0002780,6.50e-22,39;UBERON:0001890,6.50e-22,39;UBERON:0006240,6.50e-22,39;UBERON:0003080,2.72e-21,40;UBERON:0002616,1.52e-20,46;UBERON:0000955,4.85e-20,47;UBERON:0006238,4.85e-20,47;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0002346,6.82e-18,64;UBERON:0003075,6.82e-18,64;UBERON:0007284,6.82e-18,64;UBERON:0003056,7.72e-17,49;UBERON:0002619,9.98e-17,17;UBERON:0010371,2.89e-15,73;UBERON:0002021,8.66e-13,10;UBERON:0000411,8.66e-13,10;UBERON:0001950,8.66e-13,10;UBERON:0010314,2.13e-11,92;UBERON:0000025,1.61e-08,114;UBERON:0004111,9.93e-08,122;UBERON:0002420,1.83e-07,8;UBERON:0007245,1.83e-07,8;UBERON:0010009,1.83e-07,8;UBERON:0010011,1.83e-07,8;UBERON:0000454,1.83e-07,8;UBERON:0011216,2.10e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,5.07065122804943,0,0,0,0,0,0,0.384218305321555,2.59224030771194,4.3201900266141,1.89292465216244,0.571301968807607,0.662605622854841,2.08234358665422,3.73797336971122,11.9498442259303,1.10115880999389,1.65993539510744,0.614426133024974,0.791317726381163,1.64677758484337,1.56274011167028,1.95428099300967,0.56276261003168,1.37518422999129,1.76777151284201,2.13557521198654,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,0,0,0.251308704225729,0.695297280769106,0.767146371990992,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,1.14579102687879,2.06223818812425,2.74033007908257,0.755393897389701,0,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0.22224672780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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:65207115..65207126,+ | |||
|id=chr14:65207115..65207126,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.16e-35!23;CL:0000337!9.16e-35!23;CL:0000540!5.12e-24!33;CL:0000047!5.12e-24!33;CL:0000031!5.12e-24!33;CL:0000404!5.12e-24!33;CL:0002319!1.18e-19!43;CL:0000393!3.62e-19!39;CL:0000211!3.62e-19!39;CL:0000221!5.00e-19!44;CL:0000133!5.00e-19!44;CL:0000055!8.32e-16!50;CL:0002609!5.41e-11!6;CL:0002321!3.61e-09!70;CL:0000220!3.61e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.42e-45,23;CL:0000337,7.42e-45,23;CL:0000540,2.40e-30,33;CL:0000047,2.40e-30,33;CL:0000031,2.40e-30,33;CL:0000404,2.40e-30,33;CL:0000393,3.32e-25,39;CL:0000211,3.32e-25,39;CL:0002609,1.57e-23,6;CL:0002319,1.42e-22,43;CL:0000221,5.46e-22,44;CL:0000133,5.46e-22,44;CL:0002608,9.65e-13,3;CL:0002321,1.19e-12,70;CL:0000120,2.54e-12,3;CL:0000723,5.40e-09,91;CL:0000048,5.40e-09,91;CL:0000034,3.07e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.05e-37!34;UBERON:0002791!6.66e-30!29;UBERON:0003528!6.66e-30!29;UBERON:0001893!6.66e-30!29;UBERON:0000073!7.19e-30!75;UBERON:0001016!7.19e-30!75;UBERON:0001017!1.51e-29!73;UBERON:0005743!1.51e-29!73;UBERON:0002346!1.02e-28!71;UBERON:0003075!1.02e-28!71;UBERON:0007284!1.02e-28!71;UBERON:0004121!1.29e-28!102;UBERON:0000924!1.29e-28!102;UBERON:0006601!1.29e-28!102;UBERON:0000033!2.26e-28!63;UBERON:0003056!1.31e-26!49;UBERON:0001049!5.82e-26!52;UBERON:0005068!5.82e-26!52;UBERON:0006241!5.82e-26!52;UBERON:0007135!5.82e-26!52;UBERON:0000955!2.43e-25!50;UBERON:0006238!2.43e-25!50;UBERON:0002616!3.39e-24!49;UBERON:0002780!6.78e-22!39;UBERON:0001890!6.78e-22!39;UBERON:0006240!6.78e-22!39;UBERON:0000956!7.97e-22!21;UBERON:0001869!7.97e-22!21;UBERON:0000203!7.97e-22!21;UBERON:0003080!3.77e-21!40;UBERON:0007811!7.65e-18!86;UBERON:0002619!4.88e-16!17;UBERON:0000153!2.08e-15!94;UBERON:0002021!5.04e-12!10;UBERON:0000411!5.04e-12!10;UBERON:0001950!5.04e-12!10;UBERON:0002420!4.84e-09!8;UBERON:0007245!4.84e-09!8;UBERON:0010009!4.84e-09!8;UBERON:0010011!4.84e-09!8;UBERON:0000454!4.84e-09!8;UBERON:0001948!4.35e-08!5;UBERON:0002315!4.35e-08!5;UBERON:0000025!7.44e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.32e-33,34;UBERON:0003528,1.79e-30,29;UBERON:0002791,1.79e-30,29;UBERON:0001893,1.79e-30,29;UBERON:0000073,4.58e-27,54;UBERON:0001017,4.30e-26,73;UBERON:0001016,2.67e-25,75;UBERON:0000956,3.76e-24,21;UBERON:0001869,3.76e-24,21;UBERON:0000203,3.76e-24,21;UBERON:0001049,8.39e-23,52;UBERON:0005068,8.39e-23,52;UBERON:0006241,8.39e-23,52;UBERON:0007135,8.39e-23,52;UBERON:0002780,6.50e-22,39;UBERON:0001890,6.50e-22,39;UBERON:0006240,6.50e-22,39;UBERON:0003080,2.72e-21,40;UBERON:0002616,1.52e-20,46;UBERON:0000955,4.85e-20,47;UBERON:0006238,4.85e-20,47;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0002346,6.82e-18,64;UBERON:0003075,6.82e-18,64;UBERON:0007284,6.82e-18,64;UBERON:0003056,7.72e-17,49;UBERON:0002619,9.98e-17,17;UBERON:0010371,2.89e-15,73;UBERON:0002021,8.66e-13,10;UBERON:0000411,8.66e-13,10;UBERON:0001950,8.66e-13,10;UBERON:0010314,2.13e-11,92;UBERON:0000025,1.61e-08,114;UBERON:0004111,9.93e-08,122;UBERON:0002420,1.83e-07,8;UBERON:0007245,1.83e-07,8;UBERON:0010009,1.83e-07,8;UBERON:0010011,1.83e-07,8;UBERON:0000454,1.83e-07,8;UBERON:0011216,2.10e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,5.07065122804943,0,0,0,0,0,0,0.384218305321555,2.59224030771194,4.3201900266141,1.89292465216244,0.571301968807607,0.662605622854841,2.08234358665422,3.73797336971122,11.9498442259303,1.10115880999389,1.65993539510744,0.614426133024974,0.791317726381163,1.64677758484337,1.56274011167028,1.95428099300967,0.56276261003168,1.37518422999129,1.76777151284201,2.13557521198654,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,0,0,0.251308704225729,0.695297280769106,0.767146371990992,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,1.14579102687879,2.06223818812425,2.74033007908257,0.755393897389701,0,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0,0,0.0574354689556133,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr14:65207115..65207126,+ | |||
}} |
Revision as of 02:47, 13 September 2013
Short description: | p@chr14:65207115..65207126, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65207115..65207126, + |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.42e-45 | 23 |
neuroblast (sensu Vertebrata) | 7.42e-45 | 23 |
neuron | 2.40e-30 | 33 |
neuronal stem cell | 2.40e-30 | 33 |
neuroblast | 2.40e-30 | 33 |
electrically signaling cell | 2.40e-30 | 33 |
electrically responsive cell | 3.32e-25 | 39 |
electrically active cell | 3.32e-25 | 39 |
neuron of cerebral cortex | 1.57e-23 | 6 |
neural cell | 1.42e-22 | 43 |
ectodermal cell | 5.46e-22 | 44 |
neurectodermal cell | 5.46e-22 | 44 |
hippocampal neuron | 9.65e-13 | 3 |
embryonic cell | 1.19e-12 | 70 |
granule cell | 2.54e-12 | 3 |
somatic stem cell | 5.40e-09 | 91 |
multi fate stem cell | 5.40e-09 | 91 |
stem cell | 3.07e-08 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.