FFCP PHASE1:Hg19::chr4:186732892..186732916,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24098|TSSclassifier=S|UniProt=C9JM25,C9JI79,C9JL62,C9J620|association_with_transcript=0bp_to_ENST00000428330,ENST00000429056,ENST00000439914,ENST00000451958_5end|description=CAGE_peak_3_at_SORBS2_5end|id=chr4:186732892..186732916,-|ontology_enrichment_celltype=CL:0000223!5.14e-10!59;CL:0002076!7.53e-08!43;CL:0000066!2.72e-07!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000223,7.70e-09,58|ontology_enrichment_development_v019=UBERON:0003104;1.40e-08;31|ontology_enrichment_disease=DOID:305!2.49e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.92e-28!115;UBERON:0000481!6.37e-23!347;UBERON:0000153!3.86e-21!129;UBERON:0007811!3.86e-21!129;UBERON:0000033!1.58e-19!123;UBERON:0000062!7.21e-18!511;UBERON:0003075!4.23e-17!86;UBERON:0007284!4.23e-17!86;UBERON:0002616!9.03e-17!59;UBERON:0001049!2.39e-15!57;UBERON:0005068!2.39e-15!57;UBERON:0006241!2.39e-15!57;UBERON:0007135!2.39e-15!57;UBERON:0002346!2.58e-15!90;UBERON:0003056!4.59e-15!61;UBERON:0000955!2.06e-14!69;UBERON:0006238!2.06e-14!69;UBERON:0005743!2.29e-14!86;UBERON:0004111!3.00e-14!241;UBERON:0000466!3.17e-14!126;UBERON:0000475!3.97e-14!365;UBERON:0000477!4.91e-14!286;UBERON:0000064!1.46e-13!219;UBERON:0003080!5.07e-13!42;UBERON:0004121!6.22e-13!169;UBERON:0004119!6.58e-13!169;UBERON:0000925!6.58e-13!169;UBERON:0006595!6.58e-13!169;UBERON:0001017!1.69e-12!82;UBERON:0002780!1.69e-12!41;UBERON:0001890!1.69e-12!41;UBERON:0006240!1.69e-12!41;UBERON:0001007!2.00e-12!155;UBERON:0001555!2.00e-12!155;UBERON:0007026!2.00e-12!155;UBERON:0004921!3.85e-12!129;UBERON:0004185!3.85e-12!129;UBERON:0000924!5.91e-12!173;UBERON:0006601!5.91e-12!173;UBERON:0000922!8.27e-12!612;UBERON:0000073!1.04e-11!94;UBERON:0001016!1.04e-11!94;UBERON:0000464!1.33e-11!104;UBERON:0002050!3.85e-11!605;UBERON:0005423!3.85e-11!605;UBERON:0000119!4.81e-11!312;UBERON:0000483!5.59e-11!309;UBERON:0000923!8.33e-11!604;UBERON:0005291!8.33e-11!604;UBERON:0006598!8.33e-11!604;UBERON:0002532!8.33e-11!604;UBERON:0000025!1.51e-10!194;UBERON:0002553!2.38e-10!70;UBERON:0000467!2.97e-10!625;UBERON:0000480!4.05e-10!626;UBERON:0000077!8.31e-10!130;UBERON:0000468!1.20e-09!659;UBERON:0002417!1.96e-09!61;UBERON:0000916!1.96e-09!61;UBERON:0005177!2.58e-09!107;UBERON:0001893!2.96e-09!34;UBERON:0001048!4.29e-09!168;UBERON:0001869!4.42e-09!32;UBERON:0002020!5.22e-09!34;UBERON:0003528!5.22e-09!34;UBERON:0002791!5.96e-09!33;UBERON:0005172!1.75e-08!55;UBERON:0005173!1.75e-08!55;UBERON:0000956!4.72e-08!25;UBERON:0000203!4.72e-08!25;UBERON:0003103!5.89e-08!69;UBERON:0001041!6.07e-08!98;UBERON:0002530!8.10e-08!59;UBERON:0005911!1.98e-07!82;UBERON:0002619!2.64e-07!22;UBERON:0009569!2.76e-07!113;UBERON:0000063!3.31e-07!97;UBERON:0003886!5.73e-07!63;UBERON:0001950!7.02e-07!20|ontology_enrichment_uberon_v019=UBERON:0004921;8.60e-11;33!UBERON:0001044;1.88e-07;6!UBERON:0003293;1.88e-07;6!UBERON:0003294;1.88e-07;6!UBERON:0010047;1.88e-07;6!UBERON:0003408;1.88e-07;6!UBERON:0000167;1.88e-07;6!UBERON:0007023;2.19e-07;114!UBERON:0001041;6.18e-07;14!UBERON:0002780;9.10e-07;41!UBERON:0001890;9.10e-07;41!UBERON:0005409;9.49e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.65e-27,114;UBERON:0011216,2.84e-18,223;UBERON:0004921,4.33e-16,118;UBERON:0001007,4.51e-15,145;UBERON:0001555,4.51e-15,145;UBERON:0007026,4.51e-15,145;UBERON:0004119,1.46e-14,160;UBERON:0000925,1.46e-14,160;UBERON:0006595,1.46e-14,160;UBERON:0004111,1.26e-11,240;UBERON:0003056,3.38e-11,61;UBERON:0003075,3.66e-11,82;UBERON:0007284,3.66e-11,82;UBERON:0005177,1.66e-10,101;UBERON:0000073,3.97e-10,53;UBERON:0002616,3.97e-10,53;UBERON:0002346,4.78e-10,86;UBERON:0001041,5.18e-10,87;UBERON:0005172,1.31e-09,54;UBERON:0005173,1.31e-09,54;UBERON:0002780,4.33e-09,41;UBERON:0001890,4.33e-09,41;UBERON:0003080,4.33e-09,41;UBERON:0006240,4.33e-09,41;UBERON:0001049,4.34e-09,56;UBERON:0005068,4.34e-09,56;UBERON:0006241,4.34e-09,56;UBERON:0007135,4.34e-09,56;UBERON:0005423,4.36e-09,581;UBERON:0000922,4.91e-09,592;UBERON:0002530,7.42e-09,59;UBERON:0002417,7.80e-09,60;UBERON:0000916,7.80e-09,60;UBERON:0000955,8.19e-09,68;UBERON:0006238,8.19e-09,68;UBERON:0010371,9.85e-09,104;UBERON:0003103,1.10e-08,68;UBERON:0005911,3.37e-08,82;UBERON:0004121,8.85e-08,171;UBERON:0000924,8.85e-08,171;UBERON:0006601,8.85e-08,171;UBERON:0001008,1.27e-07,48;UBERON:0001869,1.35e-07,32;UBERON:0001044,1.87e-07,6;UBERON:0003293,1.87e-07,6;UBERON:0003294,1.87e-07,6;UBERON:0010047,1.87e-07,6;UBERON:0000167,1.87e-07,6;UBERON:0000025,2.20e-07,192;UBERON:0000483,2.47e-07,306;UBERON:0003929,2.49e-07,54;UBERON:0006554,3.21e-07,47;UBERON:0001048,3.60e-07,160;UBERON:0003408,4.12e-07,10;UBERON:0005409,4.38e-07,25;UBERON:0000119,4.91e-07,309;UBERON:0010314,5.54e-07,132;UBERON:0002791,7.56e-07,32;UBERON:0001893,7.93e-07,34|phase1_expression=0,0,0.422863212287913,1.0007329835313,0.446961094427288,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=S | |||
|UniProt=C9JM25,C9JI79,C9JL62,C9J620 | |||
|association_with_transcript=0bp_to_ENST00000428330,ENST00000429056,ENST00000439914,ENST00000451958_5end | |||
|description=CAGE_peak_3_at_SORBS2_5end | |||
|id=chr4:186732892..186732916,- | |||
|ontology_enrichment_celltype=CL:0000223!5.14e-10!59;CL:0002076!7.53e-08!43;CL:0000066!2.72e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.70e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.40e-08;31 | |||
|ontology_enrichment_disease=DOID:305!2.49e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@SORBS2 | |||
}} |
Revision as of 10:21, 13 September 2013
Short description: | p3@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SORBS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428330, ENST00000429056, ENST00000439914, ENST00000451958_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9JM25C9JI79C9JL62C9J620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 7.70e-09 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.