FFCP PHASE1:Hg19::chr4:88754113..88754126,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56955|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13361|TSSclassifier=S|UniProt=F5H5C5,Q9NQ76|association_with_transcript=0bp_to_ENST00000508016,ENST00000515821,ENST00000540395,ENST00000560249,NM_001184695,NM_001184696,NM_001184697,NM_020203_5end|coexpression_cluster_id=C2381|description=CAGE_peak_1_at_MEPE_5end|id=chr4:88754113..88754126,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.91e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!8.25e-80!34;UBERON:0001869!2.17e-78!32;UBERON:0002791!1.26e-75!33;UBERON:0002619!2.31e-71!22;UBERON:0002780!6.76e-71!41;UBERON:0001890!6.76e-71!41;UBERON:0006240!6.76e-71!41;UBERON:0001950!2.16e-70!20;UBERON:0003080!4.16e-69!42;UBERON:0002020!2.37e-67!34;UBERON:0003528!2.37e-67!34;UBERON:0000956!1.31e-62!25;UBERON:0000203!1.31e-62!25;UBERON:0001049!2.20e-62!57;UBERON:0005068!2.20e-62!57;UBERON:0006241!2.20e-62!57;UBERON:0007135!2.20e-62!57;UBERON:0002616!9.16e-56!59;UBERON:0001017!5.71e-51!82;UBERON:0000955!6.59e-50!69;UBERON:0006238!6.59e-50!69;UBERON:0005743!2.46e-48!86;UBERON:0003056!4.39e-46!61;UBERON:0003075!1.47e-45!86;UBERON:0007284!1.47e-45!86;UBERON:0002346!2.95e-43!90;UBERON:0000073!3.34e-43!94;UBERON:0001016!3.34e-43!94;UBERON:0007023!1.78e-40!115;UBERON:0000153!3.08e-30!129;UBERON:0007811!3.08e-30!129;UBERON:0001871!2.34e-29!7;UBERON:0000200!2.66e-29!6;UBERON:0000033!1.17e-27!123;UBERON:0004121!2.66e-21!169;UBERON:0000924!1.17e-20!173;UBERON:0006601!1.17e-20!173;UBERON:0002420!7.82e-19!9;UBERON:0007245!7.82e-19!9;UBERON:0010009!7.82e-19!9;UBERON:0010011!7.82e-19!9;UBERON:0000454!7.82e-19!9;UBERON:0000349!5.94e-16!5;UBERON:0002771!6.52e-16!3;UBERON:0001872!8.69e-16!5;UBERON:0000025!3.23e-15!194;UBERON:0002021!5.44e-15!5;UBERON:0001870!4.43e-11!2;UBERON:0001876!4.65e-11!2;UBERON:0009663!4.72e-11!7;UBERON:0004111!5.64e-11!241;UBERON:0001875!9.67e-11!2;UBERON:0006514!9.67e-11!2;UBERON:0000064!1.33e-10!219;UBERON:0002360!3.34e-10!2;UBERON:0000094!3.34e-10!2;UBERON:0007645!3.34e-10!2;UBERON:0000477!6.27e-10!286;UBERON:0000483!1.78e-09!309;UBERON:0000119!2.57e-09!312;UBERON:0002308!1.30e-08!9;UBERON:0000125!1.30e-08!9;UBERON:0000475!1.93e-08!365;UBERON:0000062!8.53e-07!511|ontology_enrichment_uberon_v019=UBERON:0001869;1.20e-72;32!UBERON:0002619;1.60e-72;22!UBERON:0001950;1.74e-69;20!UBERON:0001893;3.98e-65;34!UBERON:0002791;1.96e-64;32!UBERON:0000956;7.40e-64;25!UBERON:0000203;7.40e-64;25!UBERON:0003528;1.15e-59;34!UBERON:0002020;1.15e-59;34!UBERON:0000200;3.26e-46;6!UBERON:0002780;7.42e-46;41!UBERON:0001890;7.42e-46;41!UBERON:0001871;8.23e-28;6!UBERON:0000073;8.69e-28;53!UBERON:0002616;8.69e-28;53!UBERON:0000349;7.11e-25;5!UBERON:0001872;9.99e-25;5!UBERON:0001870;1.64e-24;3!UBERON:0002420;1.93e-21;9!UBERON:0007245;1.93e-21;9!UBERON:0010009;1.93e-21;9!UBERON:0010011;1.93e-21;9!UBERON:0000454;1.93e-21;9!UBERON:0001017;1.98e-19;75!UBERON:0002702;4.91e-17;2!UBERON:0002771;5.76e-17;2!UBERON:0000955;7.01e-17;68!UBERON:0001876;8.89e-17;2!UBERON:0001875;1.95e-16;2!UBERON:0006514;1.95e-16;2!UBERON:0001016;2.01e-15;83!UBERON:0009663;1.80e-10;7!UBERON:0003112;3.05e-09;1!UBERON:0011158;3.05e-09;1!UBERON:0003128;3.05e-09;1!UBERON:0001703;3.05e-09;1!UBERON:0002241;3.05e-09;1!UBERON:0001882;5.53e-09;1!UBERON:0002022;5.53e-09;1!UBERON:0005403;5.53e-09;1!UBERON:0002581;8.82e-09;1!UBERON:0007190;8.82e-09;1!UBERON:0007023;2.14e-08;114!UBERON:0000125;2.98e-08;9!UBERON:0002308;2.98e-08;9!UBERON:0011216;6.56e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.66e-80,32;UBERON:0001893,1.00e-75,34;UBERON:0002619,1.41e-72,22;UBERON:0002791,3.70e-72,32;UBERON:0001950,1.74e-69,20;UBERON:0003528,7.35e-68,34;UBERON:0002020,7.35e-68,34;UBERON:0000956,6.63e-64,25;UBERON:0000203,6.63e-64,25;UBERON:0002780,1.44e-62,41;UBERON:0001890,1.44e-62,41;UBERON:0003080,1.44e-62,41;UBERON:0006240,1.44e-62,41;UBERON:0001049,3.01e-50,56;UBERON:0005068,3.01e-50,56;UBERON:0006241,3.01e-50,56;UBERON:0007135,3.01e-50,56;UBERON:0000073,6.10e-48,53;UBERON:0002616,6.10e-48,53;UBERON:0000200,2.79e-46,6;UBERON:0003056,2.49e-41,61;UBERON:0001017,5.37e-41,81;UBERON:0000955,1.91e-40,68;UBERON:0006238,1.91e-40,68;UBERON:0001016,1.25e-36,89;UBERON:0003075,1.97e-33,82;UBERON:0007284,1.97e-33,82;UBERON:0002346,9.80e-32,86;UBERON:0007023,7.09e-29,114;UBERON:0001871,7.37e-28,6;UBERON:0010371,1.08e-25,104;UBERON:0000349,6.10e-25,5;UBERON:0001872,1.13e-24,5;UBERON:0001870,1.65e-24,3;UBERON:0010314,8.03e-22,132;UBERON:0002420,2.24e-21,9;UBERON:0007245,2.24e-21,9;UBERON:0010009,2.24e-21,9;UBERON:0010011,2.24e-21,9;UBERON:0000454,2.24e-21,9;UBERON:0004121,1.33e-17,171;UBERON:0000924,1.33e-17,171;UBERON:0006601,1.33e-17,171;UBERON:0002702,4.91e-17,2;UBERON:0002771,5.32e-17,2;UBERON:0001876,7.90e-17,2;UBERON:0001875,2.56e-16,2;UBERON:0006514,2.56e-16,2;UBERON:0011216,4.64e-14,223;UBERON:0000025,2.42e-12,192;UBERON:0009663,2.12e-10,7;UBERON:0003112,3.31e-09,1;UBERON:0011158,3.31e-09,1;UBERON:0003128,3.31e-09,1;UBERON:0001703,3.31e-09,1;UBERON:0002241,3.31e-09,1;UBERON:0004761,3.31e-09,1;UBERON:0009617,3.31e-09,1;UBERON:0004111,3.72e-09,240;UBERON:0002022,5.75e-09,1;UBERON:0001882,6.22e-09,1;UBERON:0005403,6.22e-09,1;UBERON:0007190,6.72e-09,1;UBERON:0002581,1.07e-08,1;UBERON:0000125,3.38e-08,9;UBERON:0002308,3.38e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94475110019054,15.2642574853088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,34.1826681877546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79252024559551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52101198345551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77064427945048,0,0,0,0,0,2.49073182297901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,12.3246527550983,11.1419928328785,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0553352030867,0,0.638535436228605,1.43581454968528,0.252071696221718,0.345786262321089,6.13607453401034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95858995393344,5.46754669029693,5.37385670903079,2.7902956485319,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.24968269769413,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,1.42782129400921,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,4.90438158372256,0,0.0645889098360061,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@MEPE}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56955 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13361 | |||
|TSSclassifier=S | |||
|UniProt=F5H5C5,Q9NQ76 | |||
|association_with_transcript=0bp_to_ENST00000508016,ENST00000515821,ENST00000540395,ENST00000560249,NM_001184695,NM_001184696,NM_001184697,NM_020203_5end | |||
|coexpression_cluster_id=C2381 | |||
|description=CAGE_peak_1_at_MEPE_5end | |||
|id=chr4:88754113..88754126,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.91e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@MEPE | |||
}} |
Revision as of 12:14, 13 September 2013
Short description: | p1@MEPE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MEPE_5end |
Coexpression cluster: | C2381_amygdala_Saos2_medial_globus_frontal_middle_olfactory |
Association with transcript: | 0bp_to_ENST00000508016, ENST00000515821, ENST00000540395, ENST00000560249, NM_001184695, NM_001184696, NM_001184697, NM_020203_5end |
EntrezGene: | MEPE |
HGNC: | 13361 |
UniProt: | F5H5C5Q9NQ76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.