FFCP PHASE1:Mm9::chr1:80755237..80755255,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=210293|HGNC=|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0|association_with_transcript=-109bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end|description=CAGE_peak_7_at_Dock10_5end|id=chr1:80755237..80755255,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,4.67e-14,9;CL:0000789,4.67e-14,9;CL:0002420,4.67e-14,9;CL:0002419,4.67e-14,9;CL:0000790,4.67e-14,9;CL:0000624,5.06e-12,8;CL:0000893,1.85e-11,6;CL:0002489,1.85e-11,6;CL:0000898,1.85e-11,6;CL:0000809,1.85e-11,6;CL:0000810,1.85e-11,6;CL:0000895,1.85e-11,6;CL:0000808,1.85e-11,6;CL:0000894,1.85e-11,6;CL:0000806,1.85e-11,6;CL:0000807,1.85e-11,6;CL:0000805,1.85e-11,6;CL:0002425,1.85e-11,6;CL:0002436,1.85e-11,6;CL:0002427,1.85e-11,6;CL:0002428,1.85e-11,6;CL:0002429,1.85e-11,6;CL:0002433,1.85e-11,6;CL:0002431,1.85e-11,6;CL:0002432,1.85e-11,6;CL:0000084,2.45e-11,11;CL:0000827,2.45e-11,11;CL:0000838,2.57e-10,12;CL:0000542,1.88e-09,13;CL:0000051,1.88e-09,13;CL:0002614,5.41e-09,3;CL:0000738,5.14e-07,17;CL:0002087,5.14e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002950,8.44e-12,4;UBERON:0001891,8.44e-12,4;UBERON:0009616,8.44e-12,4;UBERON:0010286,8.44e-12,4;UBERON:0000073,1.34e-10,54;UBERON:0001017,1.39e-10,73;UBERON:0001016,3.44e-10,75;UBERON:0001049,1.21e-09,52;UBERON:0005068,1.21e-09,52;UBERON:0006241,1.21e-09,52;UBERON:0007135,1.21e-09,52;UBERON:0000955,1.62e-09,47;UBERON:0006238,1.62e-09,47;UBERON:0002038,5.41e-09,3;UBERON:0009663,5.41e-09,3;UBERON:0009661,5.41e-09,3;UBERON:0000125,5.41e-09,3;UBERON:0002308,5.41e-09,3;UBERON:0002616,2.78e-08,46;UBERON:0003076,3.34e-08,12;UBERON:0003057,3.34e-08,12;UBERON:0004733,4.82e-08,6;UBERON:0004732,4.82e-08,6;UBERON:0002028,4.82e-08,6;UBERON:0007277,4.82e-08,6;UBERON:0001896,1.69e-07,2;UBERON:0002298,1.69e-07,2;UBERON:0005290,1.69e-07,2;UBERON:0010096,1.69e-07,2;UBERON:0002346,3.08e-07,64;UBERON:0003075,3.08e-07,64;UBERON:0007284,3.08e-07,64;UBERON:0004121,3.53e-07,95;UBERON:0000924,3.53e-07,95;UBERON:0006601,3.53e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,2.67498572088167,4.44722600011788,1.02730780935303,1.43589886191606,1.19840510951844,0.611942816932982,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,1.45072428402269,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,2.17068474744819,2.76491759861238,0.131886287730194,0,0,1.95428099300967,1.12552522006336,2.75036845998258,1.17851434189467,0.142371680799103,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,1.63286352971307,0.520455980298408,0.304465478312141,0.691846491768175,0,0.940709657085638,0.502666365318702,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,0,1.17112318804619,1.25668024088073,0.255457055208591,0,0,0.254140454146129,4.49371918214468,5.49000723382352,0.502617408451458,1.73824320192276,1.79000820131231,4.98691306942944,3.73154905055843,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,1.23469281844766,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0,0,0,0,4.6263788684108,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0,0.210407459670956,0.189709611372772,0,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,5.13761887960934,6.91548950893999,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,1.97643888973262,2.89189184779626,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0,0,4.26478194624172,0,1.03193433981611,0.555583582109135,0,0.410082683163076,0.228778173206523,0.849892149969277,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0.655087691238533,0.134864346384821,0.330613822901344,0,0,0,0,0.897099276263873,0,0.388902376688095,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0.410843828659309,0,0.537080087002444,0,0.480781798079875,0,0.403865799792591,0.15241361331,0.302478555410522,0.487289403698762,0.192423683280659,0.3506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| ||
|EntrezGene=210293 | |||
|HGNC= | |||
|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0 | |||
|association_with_transcript=-109bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end | |||
|description=CAGE_peak_7_at_Dock10_5end | |||
|id=chr1:80755237..80755255,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.67e-14,9;CL:0000789,4.67e-14,9;CL:0002420,4.67e-14,9;CL:0002419,4.67e-14,9;CL:0000790,4.67e-14,9;CL:0000624,5.06e-12,8;CL:0000893,1.85e-11,6;CL:0002489,1.85e-11,6;CL:0000898,1.85e-11,6;CL:0000809,1.85e-11,6;CL:0000810,1.85e-11,6;CL:0000895,1.85e-11,6;CL:0000808,1.85e-11,6;CL:0000894,1.85e-11,6;CL:0000806,1.85e-11,6;CL:0000807,1.85e-11,6;CL:0000805,1.85e-11,6;CL:0002425,1.85e-11,6;CL:0002436,1.85e-11,6;CL:0002427,1.85e-11,6;CL:0002428,1.85e-11,6;CL:0002429,1.85e-11,6;CL:0002433,1.85e-11,6;CL:0002431,1.85e-11,6;CL:0002432,1.85e-11,6;CL:0000084,2.45e-11,11;CL:0000827,2.45e-11,11;CL:0000838,2.57e-10,12;CL:0000542,1.88e-09,13;CL:0000051,1.88e-09,13;CL:0002614,5.41e-09,3;CL:0000738,5.14e-07,17;CL:0002087,5.14e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,8.44e-12,4;UBERON:0001891,8.44e-12,4;UBERON:0009616,8.44e-12,4;UBERON:0010286,8.44e-12,4;UBERON:0000073,1.34e-10,54;UBERON:0001017,1.39e-10,73;UBERON:0001016,3.44e-10,75;UBERON:0001049,1.21e-09,52;UBERON:0005068,1.21e-09,52;UBERON:0006241,1.21e-09,52;UBERON:0007135,1.21e-09,52;UBERON:0000955,1.62e-09,47;UBERON:0006238,1.62e-09,47;UBERON:0002038,5.41e-09,3;UBERON:0009663,5.41e-09,3;UBERON:0009661,5.41e-09,3;UBERON:0000125,5.41e-09,3;UBERON:0002308,5.41e-09,3;UBERON:0002616,2.78e-08,46;UBERON:0003076,3.34e-08,12;UBERON:0003057,3.34e-08,12;UBERON:0004733,4.82e-08,6;UBERON:0004732,4.82e-08,6;UBERON:0002028,4.82e-08,6;UBERON:0007277,4.82e-08,6;UBERON:0001896,1.69e-07,2;UBERON:0002298,1.69e-07,2;UBERON:0005290,1.69e-07,2;UBERON:0010096,1.69e-07,2;UBERON:0002346,3.08e-07,64;UBERON:0003075,3.08e-07,64;UBERON:0007284,3.08e-07,64;UBERON:0004121,3.53e-07,95;UBERON:0000924,3.53e-07,95;UBERON:0006601,3.53e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,2.67498572088167,4.44722600011788,1.02730780935303,1.43589886191606,1.19840510951844,0.611942816932982,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,1.45072428402269,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,2.17068474744819,2.76491759861238,0.131886287730194,0,0,1.95428099300967,1.12552522006336,2.75036845998258,1.17851434189467,0.142371680799103,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,1.63286352971307,0.520455980298408,0.304465478312141,0.691846491768175,0,0.940709657085638,0.502666365318702,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,0,1.17112318804619,1.25668024088073,0.255457055208591,0,0,0.254140454146129,4.49371918214468,5.49000723382352,0.502617408451458,1.73824320192276,1.79000820131231,4.98691306942944,3.73154905055843,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,1.23469281844766,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0,0,0,0,4.6263788684108,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0,0.210407459670956,0.189709611372772,0,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,5.13761887960934,6.91548950893999,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,1.97643888973262,2.89189184779626,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0,0,4.26478194624172,0,1.03193433981611,0.555583582109135,0,0.410082683163076,0.228778173206523,0.849892149969277,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0.655087691238533,0.134864346384821,0.330613822901344,0,0,0,0,0.897099276263873,0,0.388902376688095,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0.410843828659309,0,0.537080087002444,0,0.480781798079875,0,0.403865799792591,0.15241361331,0.302478555410522,0.487289403698762,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.459483751644906,0,0.115884325944855,0.38581844092741,0.824171801606613,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.237270036248348,0.394017929502254,1.22769312950907,0.464810523557898,0.385813221962283,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Dock10 | |||
}} |
Revision as of 21:03, 13 September 2013
Short description: | p7@Dock10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dock10_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_ENSMUST00000077946, ENSMUST00000097681, ENSMUST00000166732, ENSMUST00000169279, NM_175291, uc007brg.2, uc007bri.2_5end |
EntrezGene: | Dock10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 8.44e-12 | 4 |
midbrain | 8.44e-12 | 4 |
presumptive midbrain | 8.44e-12 | 4 |
midbrain neural tube | 8.44e-12 | 4 |
regional part of nervous system | 1.34e-10 | 54 |
central nervous system | 1.39e-10 | 73 |
nervous system | 3.44e-10 | 75 |
neural tube | 1.21e-09 | 52 |
neural rod | 1.21e-09 | 52 |
future spinal cord | 1.21e-09 | 52 |
neural keel | 1.21e-09 | 52 |
brain | 1.62e-09 | 47 |
future brain | 1.62e-09 | 47 |
substantia nigra | 5.41e-09 | 3 |
telencephalic nucleus | 5.41e-09 | 3 |
midbrain nucleus | 5.41e-09 | 3 |
neural nucleus | 5.41e-09 | 3 |
nucleus of brain | 5.41e-09 | 3 |
regional part of brain | 2.78e-08 | 46 |
posterior neural tube | 3.34e-08 | 12 |
chordal neural plate | 3.34e-08 | 12 |
segmental subdivision of hindbrain | 4.82e-08 | 6 |
segmental subdivision of nervous system | 4.82e-08 | 6 |
hindbrain | 4.82e-08 | 6 |
presumptive hindbrain | 4.82e-08 | 6 |
medulla oblongata | 1.69e-07 | 2 |
brainstem | 1.69e-07 | 2 |
myelencephalon | 1.69e-07 | 2 |
future myelencephalon | 1.69e-07 | 2 |
neurectoderm | 3.08e-07 | 64 |
neural plate | 3.08e-07 | 64 |
presumptive neural plate | 3.08e-07 | 64 |
ectoderm-derived structure | 3.53e-07 | 95 |
ectoderm | 3.53e-07 | 95 |
presumptive ectoderm | 3.53e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.