FFCP PHASE1:Hg19::chr8:134072593..134072606,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6503|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10902|TSSclassifier=S|UniProt=Q13239|association_with_transcript=0bp_to_ENST00000427060,NM_006748,uc011ljd.1_5end|coexpression_cluster_id=C4729|description=CAGE_peak_8_at_SLA_5end|id=chr8:134072593..134072606,-|ontology_enrichment_celltype=CL:0000738!1.91e-58!140;CL:0000037!1.21e-57!172;CL:0000566!1.21e-57!172;CL:0000988!3.41e-56!182;CL:0002032!6.36e-53!165;CL:0000837!6.36e-53!165;CL:0002031!4.39e-44!124;CL:0002087!5.72e-44!119;CL:0000542!4.88e-34!53;CL:0000051!4.88e-34!53;CL:0000838!4.59e-33!52;CL:0000084!5.28e-25!25;CL:0000827!5.28e-25!25;CL:0000763!1.07e-20!112;CL:0000049!1.07e-20!112;CL:0000791!9.22e-18!18;CL:0000789!9.22e-18!18;CL:0002420!9.22e-18!18;CL:0002419!9.22e-18!18;CL:0000790!9.22e-18!18;CL:0000766!2.48e-17!76;CL:0000557!3.32e-14!71;CL:0002057!1.25e-12!42;CL:0000839!2.19e-12!70;CL:0002009!2.48e-12!65;CL:0000236!2.58e-12!14;CL:0000625!5.52e-12!11;CL:0000860!3.44e-11!45;CL:0000134!3.89e-11!358;CL:0002194!6.43e-11!63;CL:0000576!6.43e-11!63;CL:0000040!6.43e-11!63;CL:0000559!6.43e-11!63;CL:0002320!2.48e-10!365;CL:0000945!2.71e-08!24;CL:0000826!2.71e-08!24;CL:0000990!5.98e-08!8;CL:0000219!1.30e-07!390;CL:0000451!1.77e-07!10;CL:0000624!8.79e-07!6|ontology_enrichment_celltype_v019=CL:0000084;8.60e-37;25!CL:0000542;4.58e-27;53!CL:0000791;5.41e-26;18!CL:0000789;5.41e-26;18!CL:0002419;5.41e-26;18!CL:0000625;3.74e-17;11!CL:0002087;1.00e-15;104!CL:0000236;3.17e-15;13!CL:0000738;4.45e-12;136!CL:0000988;3.40e-11;177!CL:0000624;2.05e-09;6!CL:0000094;2.16e-09;8!CL:0000990;3.25e-09;8!CL:0000081;2.12e-08;11!CL:0000945;3.71e-08;24!CL:0000840;4.11e-08;5!CL:0000451;2.74e-07;10|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-60,136;CL:0000988,4.89e-54,177;CL:0000037,1.07e-53,168;CL:0002032,4.43e-50,161;CL:0000837,4.43e-50,161;CL:0002087,2.18e-47,115;CL:0000542,4.95e-45,53;CL:0000051,4.95e-45,53;CL:0002031,2.69e-44,120;CL:0000838,1.35e-43,52;CL:0000084,5.99e-37,25;CL:0000827,5.99e-37,25;CL:0000791,5.42e-26,18;CL:0000789,5.42e-26,18;CL:0002420,5.42e-26,18;CL:0002419,5.42e-26,18;CL:0000790,5.42e-26,18;CL:0000625,2.88e-17,11;CL:0000236,5.60e-14,14;CL:0000763,1.16e-13,108;CL:0000049,1.16e-13,108;CL:0000134,1.28e-13,354;CL:0002320,6.31e-13,361;CL:0000766,9.35e-13,72;CL:0000219,1.60e-10,386;CL:0000094,1.81e-09,8;CL:0000624,1.93e-09,6;CL:0000990,2.89e-09,8;CL:0000557,2.97e-09,67;CL:0002009,4.93e-09,61;CL:0000081,1.97e-08,11;CL:0000945,3.25e-08,24;CL:0000826,3.25e-08,24;CL:0000840,3.84e-08,5;CL:0001029,3.84e-08,5;CL:0000048,1.11e-07,427;CL:0000839,1.60e-07,66;CL:0002194,1.80e-07,59;CL:0000576,1.80e-07,59;CL:0000040,1.80e-07,59;CL:0000559,1.80e-07,59;CL:0000451,2.50e-07,10;CL:0000723,2.67e-07,433;CL:0000034,2.85e-07,441|ontology_enrichment_development_v019=CL:0000051;4.58e-27;53!CL:0000790;5.41e-26;18|ontology_enrichment_disease=DOID:2531!1.80e-07!51;DOID:0060083!1.80e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.13e-26!102;UBERON:0003061!1.13e-26!102;UBERON:0002193!1.19e-24!112;UBERON:0000178!6.94e-15!15;UBERON:0000179!6.94e-15!15;UBERON:0000463!6.94e-15!15;UBERON:0002371!1.20e-12!80;UBERON:0002405!8.74e-12!115;UBERON:0001474!1.72e-11!86;UBERON:0002384!1.38e-09!375;UBERON:0004765!5.77e-08!101;UBERON:0001434!5.77e-08!101;UBERON:0007023!1.07e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;9.26e-22;15!UBERON:0000179;9.26e-22;15!UBERON:0000463;9.26e-22;15!UBERON:0002390;2.83e-13;32!UBERON:0002193;3.24e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.64e-24,98;UBERON:0003061,9.64e-24,98;UBERON:0002193,8.26e-23,108;UBERON:0000178,1.20e-21,15;UBERON:0000179,1.20e-21,15;UBERON:0000463,1.20e-21,15;UBERON:0002384,5.47e-12,371;UBERON:0002405,6.04e-11,93;UBERON:0004177,1.23e-08,7;UBERON:0005057,1.23e-08,7;UBERON:0002370,1.52e-07,4;UBERON:0005058,1.52e-07,4;UBERON:0009113,1.52e-07,4;UBERON:0003295,1.52e-07,4;UBERON:0005562,1.52e-07,4;UBERON:0002371,2.08e-07,76|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,11.1310525448192,1.54816123316076,0,0,0,0,0,0.587200878669695,0.553995408531877,3.00816671205213,1.95309783644267,0.895661896959697,2.59114932815184,1.80302897343931,0.436194716338694,0,0,0.464858073811369,0,0.929119112685311,2.3015391385772,2.0492856522328,3.54723344832878,1.03423704220986,1.29096936716765,0,0.564727018627814,1.09162460023138,0,0.918251677112708,1.92557416245656,0.639337125799041,1.64925650093358,0.997318288108159,0.852449501065388,1.45104619314292,1.70215567407342,3.11411124497787,1.7587406567972,0.521482918420201,2.6062661364614,3.02699751316684,0.736555271975129,1.26584954976354,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,10.5597746676794,9.28435639145624,5.33705552318133,10.6682555641627,8.40831572775626,6.8970292794538,6.61044872784862,8.58648379081828,2.27685187643779,1.76171156811282,2.6759125968766,0,6.1655941927969,0.263384084775077,2.360517241366,5.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |||
|TSSclassifier=S | |||
|UniProt=Q13239 | |||
|association_with_transcript=0bp_to_ENST00000427060,NM_006748,uc011ljd.1_5end | |||
|coexpression_cluster_id=C4729 | |||
|description=CAGE_peak_8_at_SLA_5end | |||
|id=chr8:134072593..134072606,- | |||
|ontology_enrichment_celltype=CL:0000738!1.91e-58!140;CL:0000037!1.21e-57!172;CL:0000566!1.21e-57!172;CL:0000988!3.41e-56!182;CL:0002032!6.36e-53!165;CL:0000837!6.36e-53!165;CL:0002031!4.39e-44!124;CL:0002087!5.72e-44!119;CL:0000542!4.88e-34!53;CL:0000051!4.88e-34!53;CL:0000838!4.59e-33!52;CL:0000084!5.28e-25!25;CL:0000827!5.28e-25!25;CL:0000763!1.07e-20!112;CL:0000049!1.07e-20!112;CL:0000791!9.22e-18!18;CL:0000789!9.22e-18!18;CL:0002420!9.22e-18!18;CL:0002419!9.22e-18!18;CL:0000790!9.22e-18!18;CL:0000766!2.48e-17!76;CL:0000557!3.32e-14!71;CL:0002057!1.25e-12!42;CL:0000839!2.19e-12!70;CL:0002009!2.48e-12!65;CL:0000236!2.58e-12!14;CL:0000625!5.52e-12!11;CL:0000860!3.44e-11!45;CL:0000134!3.89e-11!358;CL:0002194!6.43e-11!63;CL:0000576!6.43e-11!63;CL:0000040!6.43e-11!63;CL:0000559!6.43e-11!63;CL:0002320!2.48e-10!365;CL:0000945!2.71e-08!24;CL:0000826!2.71e-08!24;CL:0000990!5.98e-08!8;CL:0000219!1.30e-07!390;CL:0000451!1.77e-07!10;CL:0000624!8.79e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.60e-37;25!CL:0000542;4.58e-27;53!CL:0000791;5.41e-26;18!CL:0000789;5.41e-26;18!CL:0002419;5.41e-26;18!CL:0000625;3.74e-17;11!CL:0002087;1.00e-15;104!CL:0000236;3.17e-15;13!CL:0000738;4.45e-12;136!CL:0000988;3.40e-11;177!CL:0000624;2.05e-09;6!CL:0000094;2.16e-09;8!CL:0000990;3.25e-09;8!CL:0000081;2.12e-08;11!CL:0000945;3.71e-08;24!CL:0000840;4.11e-08;5!CL:0000451;2.74e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-60,136;CL:0000988,4.89e-54,177;CL:0000037,1.07e-53,168;CL:0002032,4.43e-50,161;CL:0000837,4.43e-50,161;CL:0002087,2.18e-47,115;CL:0000542,4.95e-45,53;CL:0000051,4.95e-45,53;CL:0002031,2.69e-44,120;CL:0000838,1.35e-43,52;CL:0000084,5.99e-37,25;CL:0000827,5.99e-37,25;CL:0000791,5.42e-26,18;CL:0000789,5.42e-26,18;CL:0002420,5.42e-26,18;CL:0002419,5.42e-26,18;CL:0000790,5.42e-26,18;CL:0000625,2.88e-17,11;CL:0000236,5.60e-14,14;CL:0000763,1.16e-13,108;CL:0000049,1.16e-13,108;CL:0000134,1.28e-13,354;CL:0002320,6.31e-13,361;CL:0000766,9.35e-13,72;CL:0000219,1.60e-10,386;CL:0000094,1.81e-09,8;CL:0000624,1.93e-09,6;CL:0000990,2.89e-09,8;CL:0000557,2.97e-09,67;CL:0002009,4.93e-09,61;CL:0000081,1.97e-08,11;CL:0000945,3.25e-08,24;CL:0000826,3.25e-08,24;CL:0000840,3.84e-08,5;CL:0001029,3.84e-08,5;CL:0000048,1.11e-07,427;CL:0000839,1.60e-07,66;CL:0002194,1.80e-07,59;CL:0000576,1.80e-07,59;CL:0000040,1.80e-07,59;CL:0000559,1.80e-07,59;CL:0000451,2.50e-07,10;CL:0000723,2.67e-07,433;CL:0000034,2.85e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;4.58e-27;53!CL:0000790;5.41e-26;18 | |||
|ontology_enrichment_disease=DOID:2531!1.80e-07!51;DOID:0060083!1.80e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-26!102;UBERON:0003061!1.13e-26!102;UBERON:0002193!1.19e-24!112;UBERON:0000178!6.94e-15!15;UBERON:0000179!6.94e-15!15;UBERON:0000463!6.94e-15!15;UBERON:0002371!1.20e-12!80;UBERON:0002405!8.74e-12!115;UBERON:0001474!1.72e-11!86;UBERON:0002384!1.38e-09!375;UBERON:0004765!5.77e-08!101;UBERON:0001434!5.77e-08!101;UBERON:0007023!1.07e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.26e-22;15!UBERON:0000179;9.26e-22;15!UBERON:0000463;9.26e-22;15!UBERON:0002390;2.83e-13;32!UBERON:0002193;3.24e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.64e-24,98;UBERON:0003061,9.64e-24,98;UBERON:0002193,8.26e-23,108;UBERON:0000178,1.20e-21,15;UBERON:0000179,1.20e-21,15;UBERON:0000463,1.20e-21,15;UBERON:0002384,5.47e-12,371;UBERON:0002405,6.04e-11,93;UBERON:0004177,1.23e-08,7;UBERON:0005057,1.23e-08,7;UBERON:0002370,1.52e-07,4;UBERON:0005058,1.52e-07,4;UBERON:0009113,1.52e-07,4;UBERON:0003295,1.52e-07,4;UBERON:0005562,1.52e-07,4;UBERON:0002371,2.08e-07,76 | |||
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| |||
|short_description=p8@SLA | |||
}} |
Revision as of 03:50, 14 September 2013
Short description: | p8@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SLA_5end |
Coexpression cluster: | C4729_Hodgkin_thymus_chronic_hairy_acute_CD8_immature |
Association with transcript: | 0bp_to_ENST00000427060, NM_006748, uc011ljd.1_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | Q13239 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.64e-24 | 98 |
blood island | 9.64e-24 | 98 |
hemolymphoid system | 8.26e-23 | 108 |
blood | 1.20e-21 | 15 |
haemolymphatic fluid | 1.20e-21 | 15 |
organism substance | 1.20e-21 | 15 |
connective tissue | 5.47e-12 | 371 |
immune system | 6.04e-11 | 93 |
hemopoietic organ | 1.23e-08 | 7 |
immune organ | 1.23e-08 | 7 |
thymus | 1.52e-07 | 4 |
hemolymphoid system gland | 1.52e-07 | 4 |
thymic region | 1.52e-07 | 4 |
pharyngeal gland | 1.52e-07 | 4 |
thymus primordium | 1.52e-07 | 4 |
bone marrow | 2.08e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.