FFCP PHASE1:Hg19::chr1:21978312..21978363,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9858 | |||
|TSSclassifier=strong | |||
|UniProt=P47736,Q7Z5S8 | |||
|association_with_transcript=0bp_to_ENST00000290101,ENST00000359708,NM_001145658,uc001bew.2_5end | |||
|coexpression_cluster_id=C1845 | |||
|description=CAGE_peak_3_at_RAP1GAP_5end | |||
|id=chr1:21978312..21978363,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.51e-15;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.25e-22!143;DOID:305!1.45e-20!106;DOID:162!2.72e-14!235;DOID:14566!3.03e-13!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.11e-09,143;DOID:305,1.17e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.21e-37!82;UBERON:0000073!4.63e-37!94;UBERON:0001016!4.63e-37!94;UBERON:0005743!2.55e-36!86;UBERON:0001049!1.54e-35!57;UBERON:0005068!1.54e-35!57;UBERON:0006241!1.54e-35!57;UBERON:0007135!1.54e-35!57;UBERON:0007023!6.47e-33!115;UBERON:0002780!1.30e-30!41;UBERON:0001890!1.30e-30!41;UBERON:0006240!1.30e-30!41;UBERON:0003080!2.00e-29!42;UBERON:0000955!2.10e-29!69;UBERON:0006238!2.10e-29!69;UBERON:0002616!2.36e-28!59;UBERON:0002346!1.32e-26!90;UBERON:0001893!8.00e-26!34;UBERON:0002020!9.60e-26!34;UBERON:0003528!9.60e-26!34;UBERON:0002791!5.23e-25!33;UBERON:0003075!6.18e-25!86;UBERON:0007284!6.18e-25!86;UBERON:0001869!5.52e-24!32;UBERON:0000924!1.08e-21!173;UBERON:0006601!1.08e-21!173;UBERON:0004121!3.01e-20!169;UBERON:0002619!2.09e-19!22;UBERON:0003056!4.97e-19!61;UBERON:0000956!1.84e-18!25;UBERON:0000203!1.84e-18!25;UBERON:0001950!7.28e-18!20;UBERON:0000153!8.06e-15!129;UBERON:0007811!8.06e-15!129;UBERON:0000033!1.01e-14!123;UBERON:0002308!9.20e-09!9;UBERON:0000125!9.20e-09!9;UBERON:0000064!1.03e-08!219;UBERON:0002420!1.05e-08!9;UBERON:0007245!1.05e-08!9;UBERON:0010009!1.05e-08!9;UBERON:0010011!1.05e-08!9;UBERON:0000454!1.05e-08!9;UBERON:0004921!2.10e-08!129;UBERON:0004185!2.10e-08!129;UBERON:0000025!2.59e-08!194;UBERON:0000062!7.08e-08!511;UBERON:0001871!7.13e-08!7;UBERON:0003076!1.78e-07!15;UBERON:0003057!1.78e-07!15;UBERON:0001041!1.89e-07!98;UBERON:0000481!3.16e-07!347;UBERON:0009663!3.90e-07!7;UBERON:0004111!4.67e-07!241;UBERON:0001007!7.19e-07!155;UBERON:0001555!7.19e-07!155;UBERON:0007026!7.19e-07!155;UBERON:0008947!9.84e-07!38;UBERON:0003258!9.84e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.38e-31;41!UBERON:0001890;8.38e-31;41!UBERON:0001893;1.32e-29;34!UBERON:0003528;1.85e-29;34!UBERON:0002020;1.85e-29;34!UBERON:0002791;3.81e-29;32!UBERON:0001869;5.44e-29;32!UBERON:0002619;1.74e-28;22!UBERON:0001950;3.65e-26;20!UBERON:0000073;8.34e-26;53!UBERON:0002616;8.34e-26;53!UBERON:0000956;3.44e-24;25!UBERON:0000203;3.44e-24;25!UBERON:0000955;2.11e-19;68!UBERON:0001017;8.63e-19;75!UBERON:0001016;5.55e-18;83!UBERON:0000125;2.07e-12;9!UBERON:0002308;2.07e-12;9!UBERON:0002420;2.81e-12;9!UBERON:0007245;2.81e-12;9!UBERON:0010009;2.81e-12;9!UBERON:0010011;2.81e-12;9!UBERON:0000454;2.81e-12;9!UBERON:0009663;5.90e-10;7!UBERON:0001871;9.25e-10;6!UBERON:0007023;2.01e-09;114!UBERON:0000200;8.16e-09;6!UBERON:0002298;1.07e-08;6!UBERON:0001894;1.10e-08;7!UBERON:0011216;1.42e-08;132!UBERON:0000922;6.24e-08;49!UBERON:0000349;1.56e-07;5!UBERON:0002021;1.89e-07;5!UBERON:0001872;3.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.62e-50,81;UBERON:0001016,6.60e-50,89;UBERON:0001049,5.05e-48,56;UBERON:0005068,5.05e-48,56;UBERON:0006241,5.05e-48,56;UBERON:0007135,5.05e-48,56;UBERON:0000073,1.90e-44,53;UBERON:0002616,1.90e-44,53;UBERON:0002780,1.60e-42,41;UBERON:0001890,1.60e-42,41;UBERON:0003080,1.60e-42,41;UBERON:0006240,1.60e-42,41;UBERON:0000955,5.49e-41,68;UBERON:0006238,5.49e-41,68;UBERON:0001893,2.85e-35,34;UBERON:0003528,3.71e-35,34;UBERON:0002020,3.71e-35,34;UBERON:0002346,1.67e-33,86;UBERON:0003075,6.54e-33,82;UBERON:0007284,6.54e-33,82;UBERON:0011216,7.86e-33,223;UBERON:0002791,1.17e-32,32;UBERON:0001869,1.61e-32,32;UBERON:0003056,7.54e-29,61;UBERON:0002619,1.52e-28,22;UBERON:0007023,1.66e-28,114;UBERON:0010371,1.10e-26,104;UBERON:0001950,3.31e-26,20;UBERON:0004121,4.00e-26,171;UBERON:0000924,4.00e-26,171;UBERON:0006601,4.00e-26,171;UBERON:0000956,3.06e-24,25;UBERON:0000203,3.06e-24,25;UBERON:0010314,1.21e-16,132;UBERON:0000125,1.93e-12,9;UBERON:0002308,1.93e-12,9;UBERON:0002420,2.36e-12,9;UBERON:0007245,2.36e-12,9;UBERON:0010009,2.36e-12,9;UBERON:0010011,2.36e-12,9;UBERON:0000454,2.36e-12,9;UBERON:0000025,2.85e-12,192;UBERON:0009663,5.45e-10,7;UBERON:0004111,6.96e-10,240;UBERON:0001871,7.90e-10,6;UBERON:0000200,7.83e-09,6;UBERON:0002298,1.08e-08,6;UBERON:0001894,1.53e-08,7;UBERON:0006222,1.53e-08,7;UBERON:0003076,1.16e-07,15;UBERON:0003057,1.16e-07,15;UBERON:0000349,1.35e-07,5;UBERON:0002021,2.20e-07,5;UBERON:0001872,2.65e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.572471974262113,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,6.54895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.530119073285941,1.97529702878181,1.24393266018445,1.26160425437814,0.36497735907583,0,0,0,0,0,1.30137480043828,0.674338760312407,0.964044119533928,1.32352767278873,0.435758888184812,1.18635309555548,1.34831308160164,0.98110732562673,1.15424147083917,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.50496973370552,1.39695367442772,1.90994212779139,2.34434894420094,0,1.95372236136315,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,5.84417635711666,6.50699269288109,1.54657762555539,5.02548796003046,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,1.50506932156456,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0,0,0,0.478278818186467,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0.146508179271894,0.970884173996107,0,0,0.23874448473769,0,0.614321404198464,4.97073823883149,18.5683629661877,0,0,1.05562704063997,0.398495976502139,1.38141957765574,0,0.306806047506464,0,0,0.359473404589307,1.61119057208048,0,0,0,0,15.5093239375235,10.0189546014799,9.98068990005971,2.08342208868187,0.524759999977174,0,1.93448862085349,4.32231205497703,3.07303986298317,31.7163903382147,5.24888304089858,6.59774980746511,4.42870692906919,7.5975756334007,0,0.995213339381022,2.36438095162838,5.48463492884931,1.52513848926586,0.139423744278603,0.0769502585037971,0.341826167541004,0.23056390438806,0,0.108647371922008,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.664846727600626,2.93274358802335,2.15668787749514,1.00692952185506,1.3282761290693,0.476809736941136,3.79796516150449,0,0.282706142867882,0,1.99052386215701,0.176915129006678,2.4441205797345,0.593042257361244,0.741383633679017,1.35748534357092,23.590396543237,0.802577647298789,13.118808960619,0,0.586993856796269,0.242780379534093,0.789168805698781,2.41981432097328,9.48825561054519,0.379119477770928,0.751617097072463,0.414752765588989,1.99396161812156,0.330991955875499,1.88359751044335,1.19472429772959,0.853828638089378,0,1.21491816834592,0.0979923974143777,0.34823682632161,0.17472666824203,0,3.77349692027432,5.11625219603299,3.85942648150083,0,1.059073520298,1.35588444468319,0,0,10.2563489448524,2.34661659281764,1.28254112402454,2.56143593687223,0.999048047910651,1.72908500584927,0.114536596165916,1.71594997861965,1.00838358591705,0.248505071130865,3.29971648463514,0,0,2.85595009381701,0,6.60462317580768,19.988185318231,0,0,0,1.11712960508902,0.458320848023367,0,0.399358000997982,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0.472699093843342,0.247247575143499,0.0674035438541849,8.36633592875365,0,4.77137813885582,12.530713362265,1.28602518772015,1.2378549293751,0.83088067605837,0,0,11.7246644349988,1.34173875039706,12.4513017532733,9.12709833548967,0,0.35857467866569,2.1110671705139,0,0,0,0,0,0,0,0,0,1.81299346432201,0.732761168390412,0,7.36912851260838,12.5620971655555,8.21216821844781,3.52407511158336,1.06787412567695,1.25763444079733,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.785270481251171,6.2024772597689,6.71144456960797,10.516038179346,5.16068276121064,6.54481404067428,9.99752087356273,1.66018361923477,0,0.151649117541648,4.85291067026445,0,7.96169339871699,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,1.13352962756136,0,0,0,0.308801447160972,0,0,0.192914038270915,0.337884881306145,9.22469466916608,3.79973375904318,0.607719912354764,13.4110683067179,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0.511577485214607,0.107824811396682,3.77438260454151,1.09209638192014,4.92224336866673,4.46407332213534,0.371807292777007,8.37967376959866,0,0,3.20228299314188,0,0,11.9466358679415,4.25089728976755,11.8129055702292,7.38418911266718,7.058007494208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| |||
|short_description=p3@RAP1GAP | |||
}} |
Revision as of 16:54, 10 January 2014
Short description: | p3@RAP1GAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAP1GAP_5end |
Coexpression cluster: | C1845_spinal_corpus_carcinoid_amygdala_thalamus_brain_globus |
Association with transcript: | 0bp_to_ENST00000290101, ENST00000359708, NM_001145658, uc001bew.2_5end |
EntrezGene: | RAP1GAP |
HGNC: | 9858 |
UniProt: | P47736Q7Z5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.11e-09 | 143 |
carcinoma | 1.17e-08 | 106 |