FFCP PHASE1:Hg19::chr1:76081668..76081718,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=204962 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28524 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010ora.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_SLC44A5_5end | |||
|id=chr1:76081668..76081718,- | |||
|ontology_enrichment_celltype=CL:0002139!5.32e-10!24;CL:0002319!6.00e-08!25;CL:1000413!1.39e-07!9;CL:0000071!8.59e-07!18;CL:0002546!8.59e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.94e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.08e-09;6!DOID:171;1.76e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.34e-09,6;DOID:171,2.07e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.98e-44!94;UBERON:0001016!1.98e-44!94;UBERON:0005743!2.01e-43!86;UBERON:0001017!6.56e-41!82;UBERON:0001049!1.02e-35!57;UBERON:0005068!1.02e-35!57;UBERON:0006241!1.02e-35!57;UBERON:0007135!1.02e-35!57;UBERON:0000955!5.11e-33!69;UBERON:0006238!5.11e-33!69;UBERON:0003075!3.34e-32!86;UBERON:0007284!3.34e-32!86;UBERON:0002346!4.09e-31!90;UBERON:0000025!1.53e-30!194;UBERON:0002780!2.25e-30!41;UBERON:0001890!2.25e-30!41;UBERON:0006240!2.25e-30!41;UBERON:0003080!2.95e-29!42;UBERON:0002616!9.39e-29!59;UBERON:0001893!1.47e-27!34;UBERON:0002020!1.88e-27!34;UBERON:0003528!1.88e-27!34;UBERON:0001869!1.06e-26!32;UBERON:0002791!1.30e-26!33;UBERON:0003056!1.30e-25!61;UBERON:0004111!1.40e-24!241;UBERON:0000956!4.80e-24!25;UBERON:0000203!4.80e-24!25;UBERON:0002619!4.81e-22!22;UBERON:0004121!1.09e-20!169;UBERON:0000924!2.02e-20!173;UBERON:0006601!2.02e-20!173;UBERON:0001950!2.77e-20!20;UBERON:0000477!1.62e-19!286;UBERON:0000483!3.96e-18!309;UBERON:0000033!6.24e-18!123;UBERON:0000153!6.38e-18!129;UBERON:0007811!6.38e-18!129;UBERON:0000119!1.49e-17!312;UBERON:0007023!2.45e-17!115;UBERON:0000055!7.50e-13!69;UBERON:0000480!5.06e-12!626;UBERON:0000467!9.26e-12!625;UBERON:0001637!7.62e-11!42;UBERON:0003509!7.62e-11!42;UBERON:0004572!7.62e-11!42;UBERON:0001981!1.34e-10!60;UBERON:0007500!1.34e-10!60;UBERON:0004537!1.34e-10!60;UBERON:0006965!1.34e-10!60;UBERON:0000475!3.33e-10!365;UBERON:0002049!4.82e-10!79;UBERON:0007798!4.82e-10!79;UBERON:0000468!4.83e-10!659;UBERON:0004573!1.32e-09!33;UBERON:0004571!1.32e-09!33;UBERON:0000922!1.94e-09!612;UBERON:0000923!3.81e-09!604;UBERON:0005291!3.81e-09!604;UBERON:0006598!3.81e-09!604;UBERON:0002532!3.81e-09!604;UBERON:0002050!4.84e-09!605;UBERON:0005423!4.84e-09!605;UBERON:0000481!5.54e-09!347;UBERON:0001871!1.56e-08!7;UBERON:0004872!7.19e-08!84;UBERON:0003076!9.42e-08!15;UBERON:0003057!9.42e-08!15;UBERON:0003915!1.39e-07!9;UBERON:0004700!1.39e-07!9;UBERON:0001917!1.39e-07!9;UBERON:0004535!2.12e-07!110;UBERON:0000064!2.70e-07!219;UBERON:0001009!3.16e-07!113;UBERON:0001986!8.59e-07!18;UBERON:0004638!8.59e-07!18;UBERON:0004852!8.59e-07!18;UBERON:0000200!9.20e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.11e-43;25!UBERON:0000203;2.11e-43;25!UBERON:0002619;2.86e-42;22!UBERON:0001869;1.89e-40;32!UBERON:0001950;2.05e-38;20!UBERON:0003528;2.38e-38;34!UBERON:0002020;2.38e-38;34!UBERON:0002791;5.69e-37;32!UBERON:0001893;1.80e-36;34!UBERON:0002780;1.67e-29;41!UBERON:0001890;1.67e-29;41!UBERON:0000073;9.47e-25;53!UBERON:0002616;9.47e-25;53!UBERON:0001016;1.24e-18;83!UBERON:0001017;1.65e-17;75!UBERON:0000955;3.68e-16;68!UBERON:0001871;2.05e-14;6!UBERON:0002021;7.02e-12;5!UBERON:0001872;1.38e-11;5!UBERON:0000349;4.29e-10;5!UBERON:0000200;1.64e-09;6!UBERON:0002298;4.00e-08;6!UBERON:0011216;1.05e-07;132!UBERON:0000013;5.18e-07;5!UBERON:0002410;5.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.80e-52,89;UBERON:0001017,1.82e-47,81;UBERON:0001049,1.81e-46,56;UBERON:0005068,1.81e-46,56;UBERON:0006241,1.81e-46,56;UBERON:0007135,1.81e-46,56;UBERON:0001869,4.47e-45,32;UBERON:0003528,1.59e-44,34;UBERON:0002020,1.59e-44,34;UBERON:0000073,4.14e-44,53;UBERON:0002616,4.14e-44,53;UBERON:0000956,1.58e-43,25;UBERON:0000203,1.58e-43,25;UBERON:0002619,1.79e-42,22;UBERON:0001893,5.45e-42,34;UBERON:0002780,1.55e-41,41;UBERON:0001890,1.55e-41,41;UBERON:0003080,1.55e-41,41;UBERON:0006240,1.55e-41,41;UBERON:0002791,1.61e-41,32;UBERON:0000955,2.49e-40,68;UBERON:0006238,2.49e-40,68;UBERON:0001950,1.20e-38,20;UBERON:0003075,1.63e-37,82;UBERON:0007284,1.63e-37,82;UBERON:0002346,2.60e-37,86;UBERON:0003056,3.43e-35,61;UBERON:0010371,6.07e-27,104;UBERON:0004121,4.73e-25,171;UBERON:0000924,4.73e-25,171;UBERON:0006601,4.73e-25,171;UBERON:0010314,1.58e-24,132;UBERON:0011216,3.22e-21,223;UBERON:0000025,4.23e-21,192;UBERON:0004111,2.46e-16,240;UBERON:0001871,1.28e-14,6;UBERON:0007023,5.85e-13,114;UBERON:0000483,1.33e-12,306;UBERON:0000119,2.53e-12,309;UBERON:0002021,6.22e-12,5;UBERON:0001872,1.46e-11,5;UBERON:0000349,2.46e-10,5;UBERON:0000200,1.44e-09,6;UBERON:0002298,4.96e-08,6;UBERON:0003076,3.27e-07,15;UBERON:0003057,3.27e-07,15;UBERON:0005423,4.59e-07,581;UBERON:0000922,4.97e-07,592;UBERON:0000013,6.43e-07,5;UBERON:0002410,6.43e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0,1.71741592278634,1.09499540058307,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,0.189069634328136,0,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0.596287222100115,3.4409383804245,0.694281003215189,6.78369530308812,1.25849830862972,1.10047216776027,0.626984899610432,1.29208379584664,4.62496141492723,2.00832367658802,0,0,0.488124115096339,0.735326160691737,2.43042584364528,0.714397826272638,0.673588117878509,0.337834441449967,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,1.2333377420858,0,0.67355336034844,0,0,0,0.234321431833797,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43453850447661,0.939269553886573,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,19.5209780786433,23.1986643833309,22.6146958201371,24.2416725628202,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.46329140498388,0,0,1.89992932007176,1.13733384070897,0.340187410553031,0,0,0,0.501689773854853,0,0,0,0,0,1.28225062558195,0.328014645699706,1.95227036798582,0,1.00726411300178,0.742585499285292,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,3.15051172476664,2.00374841438788,0,0,0,0,0,0,2.35484592059769,0,0,0,0.202182481573316,1.58510321173008,0.842516912477962,0,0.243713489631284,0,0,0,0,0,1.99031692572366,0.876901770507525,0,0,0.811641507850816,0,0,0,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.924843963529383,0.797131363644112,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0.844501632511974,0.19924798825107,0,0,30.4760673856421,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,1.94813006139888,25.9497937401552,0,0.874599999961957,0,0,1.01701460117107,0,0,0.874813840149763,0.868124974666461,1.77148277162768,1.32656082487949,0,0.221158519862449,1.18219047581419,1.97446857438575,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,1.14262965711403,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0.808813595768125,1.60515529459758,0.937057782901357,0,0,0,0,1.20990716048664,52.3384422388138,0.189559738885464,1.05226393590145,0.414752765588989,0,0,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,4.11520173713212,0,0,0.213452994739353,0.19980960958213,0,0.229073192331831,1.71594997861965,0,0.124252535565433,0,0.951329442515298,0.627617077873999,0,0.288950589901519,0,0.410716136675979,0,3.0083580899397,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0,0.940568614814168,0,0,0,0,0.0674035438541849,2.75596948241297,0,2.38568906942791,3.26888174667781,0.160753148465019,0,0.415440338029185,0,0,3.21972650287531,0,0,2.20309270166992,0.211200673038813,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,1.29282956361551,1.05786081394152,0,0,0.106787412567695,1.25763444079733,0,0,0.197611631897944,0,0,0,0,0,0,0,0.886068179966986,3.41673541725497,3.8809188519015,1.72022758707021,1.44207766997908,0.869349641179368,0.830091809617385,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0,0,0,0,0,0,0.813741466409323,0,0.322231671127465,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,1.79088841081487,0,0,0.176689145945881,0,0,0.512483037175893,0,0,6.08337119067615,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0,4.47630299562781,1.40172254815686,1.25812753484717,3.1670795075684,0,8.07784696386395,0,0,0,0.70975570501128,0,0,0,1.54150140231503,4.25089728976755,6.5449882213432,2.46139637088906,43.3563317501355,3.80364888553198,3.39098855826887,2.85538840518309,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0.163771917510097,0,3.7821047386301,3.12431239445539,4.34042272652487,2.85371145872581,47.0398335755669,0,0,0,0.127762427639595,0,0.336283722218824,1.21393120847326,0.91064876540519,0,0.691403925334676,0.171488009437418,3.33051691586475,2.23627430113687,0,0,0.470958557103084,0.471346769748006,0,4.56579360254748,0,0,0.357382720883282,1.73814972905999,0,0,0,0,0,0,0,0,0,0,2.52017555398455,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0.233939463462106,0,0.118920090777569,0.5647304101948,4.06779911958088,1.96251696636676,0.0771741581079447,0.218559560503957,0,0,8.95570878986179,0.981542335574726,1.78227840196252,3.3812458206672,0,0,0.193373663920732,0.199882311849858,0,0,0,2.19100916473955,0,0.286679166302903,0,2.58367662725476,34.9080552272302,0.5290268405154,0.371995018166751,0,0,0,0,0.253397002022874,0,0,0.275684698604535,0,0.0757786982182394,0,2.48750831837634,1.55149493792843,0,1.66645102024618,0.0645889098360061,0.124149428591716,0,0,1.41482032270754,0.435433495793923,0,0.0673520530145875,0.143444410785353,1.66330178273007,0.325613074443898,0,0,0,0,0.611207220914332,0,0,0.805095174364105,0 | |||
|short_description=p2@SLC44A5 | |||
}} |
Revision as of 19:08, 10 January 2014
Short description: | p2@SLC44A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC44A5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_uc010ora.1_5end |
EntrezGene: | SLC44A5 |
HGNC: | 28524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.34e-09 | 6 |
neuroectodermal tumor | 2.07e-07 | 10 |