FFCP PHASE1:Hg19::chr14:57275164..57275176,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr14:57275164..57275176,- | |||
|id=chr14:57275164..57275176,- | |||
|ontology_enrichment_celltype=CL:0002319!1.35e-21!25;CL:0000047!9.04e-18!8;CL:0000540!1.25e-17!6;CL:0000031!1.25e-17!6;CL:0000404!1.25e-17!6;CL:0000133!3.48e-16!59;CL:0002322!8.85e-16!5;CL:0000221!1.21e-12!71;CL:0002586!1.50e-10!3;CL:0000128!1.92e-10!7;CL:0000126!1.92e-10!7;CL:0000127!1.92e-10!7;CL:0002453!1.92e-10!7;CL:0002605!8.61e-10!3;CL:0000095!6.49e-09!17;CL:0000123!6.49e-09!17;CL:0000149!5.39e-08!4;CL:0000243!6.46e-08!15;CL:0000125!6.46e-08!15;CL:0000030!6.46e-08!15;CL:0000339!6.46e-08!15;CL:0000147!1.13e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.49e-23;5!CL:0002586;4.85e-23;3!CL:0000147;2.42e-18;14!CL:0000149;1.94e-17;4!CL:0002605;1.14e-10;3!CL:0002319;2.22e-09;25!CL:0002321;6.55e-08;15!CL:0000243;3.09e-07;15!CL:0000125;3.09e-07;15!CL:0000148;5.40e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.21e-23,5;CL:0002586,4.17e-23,3;CL:0000147,2.11e-18,14;CL:0000149,1.74e-17,4;CL:0002605,1.39e-10,3;CL:0002319,2.42e-09,25;CL:0000133,2.53e-08,59;CL:0000333,1.41e-07,41;CL:0000243,3.30e-07,15;CL:0000125,3.30e-07,15;CL:0000030,3.30e-07,15;CL:0000339,3.30e-07,15;CL:0000148,5.12e-07,10;CL:0000541,5.12e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.81e-11;3!CL:0000339;3.09e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.30e-33!86;UBERON:0000073!4.63e-29!94;UBERON:0001016!4.63e-29!94;UBERON:0001017!4.89e-26!82;UBERON:0002346!1.25e-21!90;UBERON:0003075!3.71e-21!86;UBERON:0007284!3.71e-21!86;UBERON:0003056!1.62e-17!61;UBERON:0000924!5.14e-17!173;UBERON:0006601!5.14e-17!173;UBERON:0000966!1.53e-16!5;UBERON:0005388!1.53e-16!5;UBERON:0001802!1.53e-16!5;UBERON:0004121!1.91e-16!169;UBERON:0002616!3.01e-16!59;UBERON:0000955!3.34e-16!69;UBERON:0006238!3.34e-16!69;UBERON:0001049!3.34e-15!57;UBERON:0005068!3.34e-15!57;UBERON:0006241!3.34e-15!57;UBERON:0007135!3.34e-15!57;UBERON:0000153!6.54e-15!129;UBERON:0007811!6.54e-15!129;UBERON:0000033!8.01e-15!123;UBERON:0000970!6.22e-11!20;UBERON:0001894!1.01e-10!7;UBERON:0006222!1.01e-10!7;UBERON:0001781!1.50e-10!3;UBERON:0001782!1.50e-10!3;UBERON:0005424!1.50e-10!3;UBERON:0001896!1.99e-10!3;UBERON:0005290!1.99e-10!3;UBERON:0010096!1.99e-10!3;UBERON:0002780!2.06e-10!41;UBERON:0001890!2.06e-10!41;UBERON:0006240!2.06e-10!41;UBERON:0002104!2.51e-10!21;UBERON:0003080!4.27e-10!42;UBERON:0002298!2.18e-09!8;UBERON:0007625!2.65e-09!11;UBERON:0000020!2.83e-09!23;UBERON:0000019!4.25e-09!19;UBERON:0000047!4.25e-09!19;UBERON:0004088!4.25e-09!19;UBERON:0003072!4.25e-09!19;UBERON:0003071!4.25e-09!19;UBERON:0004128!4.25e-09!19;UBERON:0001032!8.15e-09!24;UBERON:0004456!8.15e-09!24;UBERON:0004733!1.72e-08!12;UBERON:0002028!1.72e-08!12;UBERON:0007277!1.72e-08!12;UBERON:0001456!4.26e-08!21;UBERON:0004732!8.80e-08!13;UBERON:0001905!9.22e-08!2;UBERON:0002757!9.22e-08!2;UBERON:0010134!9.22e-08!2;UBERON:0002784!9.22e-08!2;UBERON:0005408!9.22e-08!2;UBERON:0001899!9.22e-08!2;UBERON:0003296!1.00e-07!4;UBERON:0010133!1.00e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.76e-37;5!UBERON:0005388;1.76e-37;5!UBERON:0001802;1.76e-37;5!UBERON:0001781;4.85e-23;3!UBERON:0001782;4.85e-23;3!UBERON:0001905;2.01e-16;2!UBERON:0002757;2.01e-16;2!UBERON:0010134;2.01e-16;2!UBERON:0005408;2.01e-16;2!UBERON:0001899;2.01e-16;2!UBERON:0000970;4.65e-13;20!UBERON:0002104;2.06e-12;21!UBERON:0000020;2.73e-11;23!UBERON:0001896;4.32e-11;3!UBERON:0005290;4.32e-11;3!UBERON:0001032;8.46e-11;24!UBERON:0004456;8.46e-11;24!UBERON:0000019;9.06e-10;19!UBERON:0000047;9.06e-10;19!UBERON:0004088;9.06e-10;19!UBERON:0010230;9.06e-10;19!UBERON:0001456;8.08e-09;21!UBERON:0003296;1.18e-08;4!UBERON:0010133;1.18e-08;4!UBERON:0002784;1.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.75e-31,6;UBERON:0005388,2.75e-31,6;UBERON:0001802,2.75e-31,6;UBERON:0001782,4.17e-23,3;UBERON:0005424,4.17e-23,3;UBERON:0001781,1.74e-17,4;UBERON:0001905,2.01e-16,2;UBERON:0002757,2.01e-16,2;UBERON:0010134,2.01e-16,2;UBERON:0005408,2.01e-16,2;UBERON:0001899,2.01e-16,2;UBERON:0000970,1.95e-12,21;UBERON:0002104,1.95e-12,21;UBERON:0001896,4.00e-11,3;UBERON:0005290,4.00e-11,3;UBERON:0010096,4.00e-11,3;UBERON:0000020,8.09e-11,24;UBERON:0001032,8.09e-11,24;UBERON:0004456,8.09e-11,24;UBERON:0002346,3.15e-10,86;UBERON:0000019,2.76e-09,20;UBERON:0000047,2.76e-09,20;UBERON:0010312,2.76e-09,20;UBERON:0004088,2.76e-09,20;UBERON:0010230,2.76e-09,20;UBERON:0003072,2.76e-09,20;UBERON:0004128,2.76e-09,20;UBERON:0003071,2.76e-09,20;UBERON:0003075,4.97e-09,82;UBERON:0007284,4.97e-09,82;UBERON:0003296,1.18e-08,4;UBERON:0010133,1.18e-08,4;UBERON:0002784,1.18e-08,4;UBERON:0001456,2.01e-08,22;UBERON:0003056,2.06e-08,61;UBERON:0001017,2.39e-07,81;UBERON:0004121,7.91e-07,171;UBERON:0000924,7.91e-07,171;UBERON:0006601,7.91e-07,171;UBERON:0010371,9.55e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,2.0036519099174,2.05311637609326,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,3.44577397635862,1.74290914304278,2.38420426535352,1.7662459561294,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10320200186223,2.95213181129735,9.11059505060049,0,1.55668090191184,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7474804678508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,3.61569185248852,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,1.60753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2022758707021,3.66065870071613,0.931446044120752,80.5189055328863,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,2.37625541935635,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57122937405259,20.1770233331294,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8644347148518,6.00451724584361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0302447462504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0.0679914901909147,0,0,0,0,0,1.89249637252618,4.15209173462043,13.4300411072123,0.101988829741982,0.26721740526556,0.36757959813938,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:57275164..57275176,- | |||
}} |
Revision as of 20:16, 11 January 2014
Short description: | p@chr14:57275164..57275176, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:57275164..57275176, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.21e-23 | 5 |
retinal pigment epithelial cell | 4.17e-23 | 3 |
pigment cell | 2.11e-18 | 14 |
visual pigment cell | 1.74e-17 | 4 |
astrocyte of the cerebral cortex | 1.39e-10 | 3 |
neural cell | 2.42e-09 | 25 |
neurectodermal cell | 2.53e-08 | 59 |
migratory neural crest cell | 1.41e-07 | 41 |
glial cell (sensu Vertebrata) | 3.30e-07 | 15 |
glial cell | 3.30e-07 | 15 |
glioblast | 3.30e-07 | 15 |
glioblast (sensu Vertebrata) | 3.30e-07 | 15 |
melanocyte | 5.12e-07 | 10 |
melanoblast | 5.12e-07 | 10 |