FFCP PHASE1:Hg19::chr15:75287861..75287961,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192683 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30386 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAC9 | |||
|association_with_transcript=0bp_to_ENST00000361900,ENST00000425597,ENST00000545456,NM_001178111,NM_001178112,NM_138967,NR_033660,uc002azk.1,uc002azl.1,uc002azm.1,uc002azn.1,uc010uly.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SCAMP5_5end | |||
|id=chr15:75287861..75287961,+ | |||
|ontology_enrichment_celltype=CL:0000115!8.97e-09!35;CL:0002139!1.29e-07!24;CL:0002319!6.71e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.47e-08;24!CL:0000115;8.68e-08;36!CL:0002319;4.71e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.71e-09,36;CL:0002139,6.95e-08,24;CL:0002319,3.90e-07,25;CL:0002078,4.64e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.36e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-38!94;UBERON:0001016!1.10e-38!94;UBERON:0005743!1.30e-36!86;UBERON:0001017!4.05e-35!82;UBERON:0001049!1.03e-31!57;UBERON:0005068!1.03e-31!57;UBERON:0006241!1.03e-31!57;UBERON:0007135!1.03e-31!57;UBERON:0002346!1.15e-30!90;UBERON:0003075!2.33e-29!86;UBERON:0007284!2.33e-29!86;UBERON:0000955!2.71e-28!69;UBERON:0006238!2.71e-28!69;UBERON:0002616!3.37e-26!59;UBERON:0000025!1.58e-25!194;UBERON:0002780!5.47e-25!41;UBERON:0001890!5.47e-25!41;UBERON:0006240!5.47e-25!41;UBERON:0003080!1.70e-24!42;UBERON:0004111!2.55e-23!241;UBERON:0003056!7.54e-23!61;UBERON:0000924!5.44e-22!173;UBERON:0006601!5.44e-22!173;UBERON:0001893!4.40e-21!34;UBERON:0002020!4.57e-21!34;UBERON:0003528!4.57e-21!34;UBERON:0007023!4.97e-21!115;UBERON:0004121!8.50e-21!169;UBERON:0002791!2.11e-20!33;UBERON:0000477!2.79e-20!286;UBERON:0001869!3.54e-20!32;UBERON:0000033!2.70e-19!123;UBERON:0000153!3.29e-18!129;UBERON:0007811!3.29e-18!129;UBERON:0002619!5.24e-16!22;UBERON:0000956!5.97e-16!25;UBERON:0000203!5.97e-16!25;UBERON:0000483!2.85e-15!309;UBERON:0000119!5.40e-15!312;UBERON:0001950!8.77e-15!20;UBERON:0000481!1.01e-11!347;UBERON:0000475!1.27e-11!365;UBERON:0000064!8.66e-11!219;UBERON:0000922!5.34e-09!612;UBERON:0003076!2.50e-08!15;UBERON:0003057!2.50e-08!15;UBERON:0000468!1.24e-07!659;UBERON:0004732!2.11e-07!13;UBERON:0002050!2.84e-07!605;UBERON:0005423!2.84e-07!605;UBERON:0000923!4.10e-07!604;UBERON:0005291!4.10e-07!604;UBERON:0006598!4.10e-07!604;UBERON:0002532!4.10e-07!604;UBERON:0004733!7.56e-07!12;UBERON:0002028!7.56e-07!12;UBERON:0007277!7.56e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.42e-19;32!UBERON:0001893;4.90e-19;34!UBERON:0003528;5.16e-19;34!UBERON:0002020;5.16e-19;34!UBERON:0002791;5.99e-19;32!UBERON:0002780;6.17e-19;41!UBERON:0001890;6.17e-19;41!UBERON:0000073;3.88e-18;53!UBERON:0002616;3.88e-18;53!UBERON:0002619;1.08e-16;22!UBERON:0000956;1.11e-16;25!UBERON:0000203;1.11e-16;25!UBERON:0001950;2.06e-15;20!UBERON:0001017;1.71e-13;75!UBERON:0000955;2.43e-13;68!UBERON:0001016;6.71e-13;83!UBERON:0004732;1.10e-07;13!UBERON:0007023;1.35e-07;114!UBERON:0000922;1.51e-07;49!UBERON:0004733;4.21e-07;12!UBERON:0002028;4.21e-07;12!UBERON:0002420;6.35e-07;9!UBERON:0007245;6.35e-07;9!UBERON:0010009;6.35e-07;9!UBERON:0010011;6.35e-07;9!UBERON:0000454;6.35e-07;9!UBERON:0000125;8.25e-07;9!UBERON:0002308;8.25e-07;9 | |||
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| |||
|short_description=p1@SCAMP5 | |||
}} |
Revision as of 00:34, 12 January 2014
Short description: | p1@SCAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCAMP5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000361900, ENST00000425597, ENST00000545456, NM_001178111, NM_001178112, NM_138967, NR_033660, uc002azk.1, uc002azl.1, uc002azm.1, uc002azn.1, uc010uly.1_5end |
EntrezGene: | SCAMP5 |
HGNC: | 30386 |
UniProt: | Q8TAC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.71e-09 | 36 |
endothelial cell of vascular tree | 6.95e-08 | 24 |
neural cell | 3.90e-07 | 25 |
meso-epithelial cell | 4.64e-07 | 45 |