FFCP PHASE1:Hg19::chr2:70781308..70781337,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11765 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000474101_5end | |||
|description=CAGE_peak_3_at_TGFA_5end | |||
|id=chr2:70781308..70781337,- | |||
|ontology_enrichment_celltype=CL:0000839!5.00e-08!70;CL:0000557!9.25e-08!71;CL:0002194!3.65e-07!63;CL:0000576!3.65e-07!63;CL:0000040!3.65e-07!63;CL:0000559!3.65e-07!63;CL:0000766!3.88e-07!76;CL:0000860!9.32e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.90e-14;5!CL:0000990;8.23e-10;8!CL:0000451;4.08e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.09e-14,5;CL:0001029,2.09e-14,5;CL:0000990,8.75e-10,8;CL:0002194,1.16e-08,59;CL:0000576,1.16e-08,59;CL:0000040,1.16e-08,59;CL:0000559,1.16e-08,59;CL:0002009,2.38e-08,61;CL:0000451,4.29e-08,10;CL:0000839,1.19e-07,66;CL:0000557,1.59e-07,67;CL:0000766,6.11e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.72e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.69e-16!57;UBERON:0005068!2.69e-16!57;UBERON:0006241!2.69e-16!57;UBERON:0007135!2.69e-16!57;UBERON:0002616!1.17e-13!59;UBERON:0002780!3.53e-13!41;UBERON:0001890!3.53e-13!41;UBERON:0006240!3.53e-13!41;UBERON:0000955!8.31e-13!69;UBERON:0006238!8.31e-13!69;UBERON:0003080!1.30e-12!42;UBERON:0005743!1.83e-12!86;UBERON:0001017!2.41e-12!82;UBERON:0000073!3.00e-12!94;UBERON:0001016!3.00e-12!94;UBERON:0007023!4.79e-12!115;UBERON:0003075!2.05e-11!86;UBERON:0007284!2.05e-11!86;UBERON:0001893!6.82e-11!34;UBERON:0002020!1.63e-10!34;UBERON:0003528!1.63e-10!34;UBERON:0002346!3.09e-10!90;UBERON:0002791!3.43e-10!33;UBERON:0000480!8.56e-10!626;UBERON:0000467!1.51e-09!625;UBERON:0003056!1.74e-09!61;UBERON:0001869!2.22e-09!32;UBERON:0000033!4.64e-09!123;UBERON:0000062!7.48e-09!511;UBERON:0000153!8.41e-09!129;UBERON:0007811!8.41e-09!129;UBERON:0000922!1.01e-08!612;UBERON:0000468!2.91e-08!659;UBERON:0002619!3.03e-08!22;UBERON:0000923!8.50e-08!604;UBERON:0005291!8.50e-08!604;UBERON:0006598!8.50e-08!604;UBERON:0002532!8.50e-08!604;UBERON:0004121!1.00e-07!169;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0000025!2.67e-07!194;UBERON:0000924!3.96e-07!173;UBERON:0006601!3.96e-07!173;UBERON:0004111!4.82e-07!241;UBERON:0001950!4.90e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;5.32e-20;2!UBERON:0000122;5.32e-20;2!UBERON:0000941;6.72e-11;1!UBERON:0001785;6.72e-11;1!UBERON:0002464;6.72e-11;1!UBERON:0004904;6.72e-11;1!UBERON:0001021;6.72e-11;1!UBERON:0002336;7.39e-11;1!UBERON:0011215;7.39e-11;1!UBERON:0001018;7.39e-11;1!UBERON:0002473;7.39e-11;1!UBERON:0005340;7.39e-11;1!UBERON:0003544;7.39e-11;1!UBERON:0005970;7.39e-11;1!UBERON:0002316;7.39e-11;1!UBERON:0001020;7.39e-11;1!UBERON:0002437;7.39e-11;1!UBERON:0002581;2.50e-10;1!UBERON:0002038;2.50e-10;1!UBERON:0009661;2.50e-10;1!UBERON:0002950;2.50e-10;1!UBERON:0001891;2.50e-10;1!UBERON:0000073;2.41e-08;53!UBERON:0002616;2.41e-08;53!UBERON:0002780;2.57e-08;41!UBERON:0001890;2.57e-08;41!UBERON:0001893;1.00e-07;34!UBERON:0000200;6.67e-07;6!UBERON:0002298;6.67e-07;6!UBERON:0004732;6.97e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,5.34e-20,2;UBERON:0000122,5.34e-20,2;UBERON:0000073,2.46e-12,53;UBERON:0002616,2.46e-12,53;UBERON:0001049,1.28e-11,56;UBERON:0005068,1.28e-11,56;UBERON:0006241,1.28e-11,56;UBERON:0007135,1.28e-11,56;UBERON:0000941,6.73e-11,1;UBERON:0001785,6.73e-11,1;UBERON:0002464,6.73e-11,1;UBERON:0004904,6.73e-11,1;UBERON:0001021,6.73e-11,1;UBERON:0003902,6.73e-11,1;UBERON:0005425,6.73e-11,1;UBERON:0002336,7.40e-11,1;UBERON:0011215,7.40e-11,1;UBERON:0001018,7.40e-11,1;UBERON:0002473,7.40e-11,1;UBERON:0005340,7.40e-11,1;UBERON:0003544,7.40e-11,1;UBERON:0005970,7.40e-11,1;UBERON:0002316,7.40e-11,1;UBERON:0001020,7.40e-11,1;UBERON:0002437,7.40e-11,1;UBERON:0002581,3.96e-10,1;UBERON:0002038,4.75e-10,1;UBERON:0009661,4.75e-10,1;UBERON:0002950,4.75e-10,1;UBERON:0001891,4.75e-10,1;UBERON:0009616,4.75e-10,1;UBERON:0010286,4.75e-10,1;UBERON:0002780,6.56e-10,41;UBERON:0001890,6.56e-10,41;UBERON:0003080,6.56e-10,41;UBERON:0006240,6.56e-10,41;UBERON:0003075,1.84e-09,82;UBERON:0007284,1.84e-09,82;UBERON:0000955,3.14e-09,68;UBERON:0006238,3.14e-09,68;UBERON:0002346,5.87e-09,86;UBERON:0001893,6.11e-09,34;UBERON:0003056,1.89e-08,61;UBERON:0001016,2.18e-08,89;UBERON:0007023,6.10e-08,114;UBERON:0001017,1.38e-07,81;UBERON:0010371,3.65e-07,104;UBERON:0000200,6.48e-07,6;UBERON:0002298,7.09e-07,6;UBERON:0004732,7.26e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,0,0,0,0,0.818718450173537,0.449446968890169,0,0.641858054152187,0,1.31940520074686,0.997318288108159,0,0.870627715885752,0.56738522469114,1.86846674698672,1.25624332628372,1.5644487552606,0.217188844705117,0,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0,2.27183175558278,2.43781632218974,1.46253756570752,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0.573609190778008,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.721832238805369,0.462985512576611,0.761016608938393,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.268675568108545,0.581267877027924,0,0,0.704387472105808,0.414656231081544,0.576479813667846,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.231046011313244,1.56869953835371,0,0.73886140225013,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.638063562472921,0.4046311234222,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.281338832821026,0.333926115068718,0.16480387422676,0,0,0.276283915531148,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0,2.3948309234694,0,0.969332746095218,0.649376687132959,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.489698424477443,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0.370691816839509,0.522109747527277,3.03305098413047,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0,0,0,0,0.137041924646751,0.397429223405979,0.696418755514666,0.195551382734803,0.400794101257669,0,0,0,0.114536596165916,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0.360299883542404,0,0.315132729228895,0.0824158583811665,0.337017719270924,0,0,1.59045937961861,0.272406812223151,0.321506296930038,0.412618309791701,0,0,0,0.607495566580247,0,0.157611414598396,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.387848869084652,0.52893040697076,0,0.704815022316672,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0.942324577501406,1.77213635993397,0.366078794705889,0.500763722825999,0.573409195690071,0.998361463831671,1.4903136705932,0,0.499921631848426,0.151649117541648,0,0.941063278792687,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0.414775308455192,0,0.132864840313363,0,0.655219697692825,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.449604575675217,2.8339315265117,0.798169295285756,0.205116364240755,0,0.553258019713743,0.161475645631851,4.28308260777463,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0.80682027481408,0,0,0.163771917510097,0.147856086217045,0.8104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| |||
|short_description=p3@TGFA | |||
}} |
Revision as of 03:48, 21 January 2014
Short description: | p3@TGFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGFA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474101_5end |
EntrezGene: | TGFA |
HGNC: | 11765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.09e-14 | 5 |
common dendritic progenitor | 2.09e-14 | 5 |
conventional dendritic cell | 8.75e-10 | 8 |
monopoietic cell | 1.16e-08 | 59 |
monocyte | 1.16e-08 | 59 |
monoblast | 1.16e-08 | 59 |
promonocyte | 1.16e-08 | 59 |
macrophage dendritic cell progenitor | 2.38e-08 | 61 |
dendritic cell | 4.29e-08 | 10 |
myeloid lineage restricted progenitor cell | 1.19e-07 | 66 |
granulocyte monocyte progenitor cell | 1.59e-07 | 67 |
myeloid leukocyte | 6.11e-07 | 72 |