FFCP PHASE1:Hg19::chr6:29596131..29596154,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4070 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SUJ9,Q8IW08,Q9UBS5 | |||
|association_with_transcript=-126bp_to_NM_021903,uc003nmp.3,uc003nms.3_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_13_at_GABBR1_5end | |||
|id=chr6:29596131..29596154,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.41e-28;2!UBERON:0006222;8.16e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-34!57;UBERON:0005068!1.28e-34!57;UBERON:0006241!1.28e-34!57;UBERON:0007135!1.28e-34!57;UBERON:0001017!6.78e-30!82;UBERON:0000955!1.04e-29!69;UBERON:0006238!1.04e-29!69;UBERON:0005743!1.53e-29!86;UBERON:0002346!1.74e-29!90;UBERON:0007023!4.95e-29!115;UBERON:0002616!9.86e-29!59;UBERON:0003075!3.30e-28!86;UBERON:0007284!3.30e-28!86;UBERON:0000073!5.34e-27!94;UBERON:0001016!5.34e-27!94;UBERON:0002780!6.77e-27!41;UBERON:0001890!6.77e-27!41;UBERON:0006240!6.77e-27!41;UBERON:0003080!4.42e-26!42;UBERON:0001893!2.82e-25!34;UBERON:0002020!3.32e-25!34;UBERON:0003528!3.32e-25!34;UBERON:0001869!8.98e-25!32;UBERON:0002791!1.03e-23!33;UBERON:0003056!1.96e-18!61;UBERON:0000033!3.81e-17!123;UBERON:0000924!9.74e-17!173;UBERON:0006601!9.74e-17!173;UBERON:0000153!8.01e-16!129;UBERON:0007811!8.01e-16!129;UBERON:0002420!1.06e-15!9;UBERON:0007245!1.06e-15!9;UBERON:0010009!1.06e-15!9;UBERON:0010011!1.06e-15!9;UBERON:0000454!1.06e-15!9;UBERON:0004121!1.10e-15!169;UBERON:0002619!1.16e-15!22;UBERON:0002308!2.60e-15!9;UBERON:0000125!2.60e-15!9;UBERON:0001950!5.57e-15!20;UBERON:0000956!2.14e-13!25;UBERON:0000203!2.14e-13!25;UBERON:0009663!4.95e-12!7;UBERON:0000369!3.60e-10!4;UBERON:0002435!3.60e-10!4;UBERON:0000204!3.60e-10!4;UBERON:0010082!3.60e-10!4;UBERON:0001871!9.40e-10!7;UBERON:0003076!1.48e-09!15;UBERON:0003057!1.48e-09!15;UBERON:0000200!4.32e-09!6;UBERON:0000025!6.40e-09!194;UBERON:0004111!4.33e-08!241;UBERON:0005383!4.68e-08!3;UBERON:0005382!4.68e-08!3;UBERON:0002771!1.17e-07!3;UBERON:0000349!1.92e-07!5;UBERON:0004733!2.15e-07!12;UBERON:0002028!2.15e-07!12;UBERON:0007277!2.15e-07!12;UBERON:0000988!9.31e-07!3;UBERON:0004732!9.80e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;2.51e-68;7!UBERON:0000369;2.37e-54;4!UBERON:0002435;2.37e-54;4!UBERON:0000204;2.37e-54;4!UBERON:0002420;3.81e-53;9!UBERON:0000125;3.81e-53;9!UBERON:0007245;3.81e-53;9!UBERON:0002308;3.81e-53;9!UBERON:0010009;3.81e-53;9!UBERON:0010011;3.81e-53;9!UBERON:0000454;3.81e-53;9!UBERON:0005383;2.74e-41;3!UBERON:0005382;2.74e-41;3!UBERON:0001873;4.41e-28;2!UBERON:0001897;3.57e-27;2!UBERON:0001875;3.57e-27;2!UBERON:0006514;3.57e-27;2!UBERON:0010225;3.57e-27;2!UBERON:0002791;6.23e-24;32!UBERON:0002780;2.10e-23;41!UBERON:0001890;2.10e-23;41!UBERON:0001869;1.00e-22;32!UBERON:0003528;1.24e-21;34!UBERON:0002020;1.24e-21;34!UBERON:0001893;1.56e-21;34!UBERON:0001017;1.20e-17;75!UBERON:0001894;1.24e-17;7!UBERON:0000955;2.08e-16;68!UBERON:0000073;3.06e-16;53!UBERON:0002616;3.06e-16;53!UBERON:0001874;4.72e-15;1!UBERON:0001882;6.65e-15;1!UBERON:0005403;6.65e-15;1!UBERON:0003112;1.72e-14;1!UBERON:0011158;1.72e-14;1!UBERON:0003128;1.72e-14;1!UBERON:0001703;1.72e-14;1!UBERON:0002241;1.72e-14;1!UBERON:0002784;4.11e-14;4!UBERON:0001016;4.29e-09;83!UBERON:0007023;3.78e-08;114!UBERON:0002771;6.80e-08;2!UBERON:0002456;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,4.01e-68,7;UBERON:0000369,2.38e-54,4;UBERON:0002435,2.38e-54,4;UBERON:0000204,2.38e-54,4;UBERON:0010082,2.38e-54,4;UBERON:0002420,5.48e-53,9;UBERON:0000125,5.48e-53,9;UBERON:0007245,5.48e-53,9;UBERON:0002308,5.48e-53,9;UBERON:0010009,5.48e-53,9;UBERON:0010011,5.48e-53,9;UBERON:0000454,5.48e-53,9;UBERON:0005383,2.57e-41,3;UBERON:0005382,2.57e-41,3;UBERON:0002780,5.79e-37,41;UBERON:0001890,5.79e-37,41;UBERON:0003080,5.79e-37,41;UBERON:0006240,5.79e-37,41;UBERON:0000073,1.65e-28,53;UBERON:0002616,1.65e-28,53;UBERON:0001873,4.13e-28,2;UBERON:0010122,4.13e-28,2;UBERON:0001897,1.83e-27,2;UBERON:0010225,1.83e-27,2;UBERON:0001049,5.99e-27,56;UBERON:0005068,5.99e-27,56;UBERON:0006241,5.99e-27,56;UBERON:0007135,5.99e-27,56;UBERON:0001875,6.10e-27,2;UBERON:0006514,6.10e-27,2;UBERON:0000955,5.53e-26,68;UBERON:0006238,5.53e-26,68;UBERON:0002791,5.17e-25,32;UBERON:0001869,5.17e-25,32;UBERON:0003056,1.10e-24,61;UBERON:0003528,1.51e-23,34;UBERON:0002020,1.51e-23,34;UBERON:0001893,1.51e-23,34;UBERON:0001017,1.03e-21,81;UBERON:0001016,1.83e-19,89;UBERON:0007023,2.99e-18,114;UBERON:0003075,3.85e-18,82;UBERON:0007284,3.85e-18,82;UBERON:0001894,9.31e-18,7;UBERON:0006222,9.31e-18,7;UBERON:0002346,2.99e-17,86;UBERON:0001874,4.73e-15,1;UBERON:0001882,7.13e-15,1;UBERON:0005403,7.13e-15,1;UBERON:0003112,2.11e-14,1;UBERON:0011158,2.11e-14,1;UBERON:0003128,2.11e-14,1;UBERON:0001703,2.11e-14,1;UBERON:0002241,2.11e-14,1;UBERON:0004761,2.11e-14,1;UBERON:0009617,2.11e-14,1;UBERON:0002784,2.95e-14,4;UBERON:0010371,4.43e-14,104;UBERON:0010314,5.18e-13,132;UBERON:0004121,1.25e-09,171;UBERON:0000924,1.25e-09,171;UBERON:0006601,1.25e-09,171;UBERON:0000025,1.68e-08,192;UBERON:0011216,2.11e-08,223;UBERON:0002771,6.58e-08,2;UBERON:0005253,7.52e-08,2;UBERON:0002456,9.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.371072392647405,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,4.42870692906919,3.61789315876224,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,2.81117334870407,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,1.09524303113594,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.751145584238999,0,0.110929051536852,0.372578417648301,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0.967809053062115,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,3.53260738030527,0,1.11743701340006,0,0,0.691572524642179,1.13032951942296,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.337687923091973,0.781078098613847,0,0.507326481551255,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0.111231401892069,0,5.34193005714407,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,1.34462894620464,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p13@GABBR1 | |||
}} |
Revision as of 10:44, 22 January 2014
Short description: | p13@GABBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GABBR1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -126bp_to_NM_021903, uc003nmp.3, uc003nms.3_5end |
EntrezGene: | GABBR1 |
HGNC: | 4070 |
UniProt: | Q5SUJ9Q8IW08Q9UBS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 9.19e-08 | 2 |