FFCP PHASE1:Mm9::chr10:108446111..108446161,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20979|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=0bp_to_ENSMUST00000126278_5end|description=CAGE_peak_6_at_Syt1_5end|id=chr10:108446111..108446161,-|ontology_enrichment_celltype=CL:0000540!3.85e-07!33;CL:0000047!3.85e-07!33;CL:0000031!3.85e-07!33;CL:0000404!3.85e-07!33|ontology_enrichment_celltype_v019_2=CL:0002614,1.53e-07,3;CL:0000117,1.56e-07,23;CL:0000337,1.56e-07,23;CL:0002610,2.84e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.91e-26!71;UBERON:0003075!7.91e-26!71;UBERON:0007284!7.91e-26!71;UBERON:0000073!1.36e-23!75;UBERON:0001016!1.36e-23!75;UBERON:0004121!2.27e-23!102;UBERON:0000924!2.27e-23!102;UBERON:0006601!2.27e-23!102;UBERON:0001017!7.91e-23!73;UBERON:0005743!7.91e-23!73;UBERON:0000033!5.32e-22!63;UBERON:0001049!1.21e-20!52;UBERON:0005068!1.21e-20!52;UBERON:0006241!1.21e-20!52;UBERON:0007135!1.21e-20!52;UBERON:0000955!8.00e-20!50;UBERON:0006238!8.00e-20!50;UBERON:0002616!6.97e-19!49;UBERON:0003056!4.33e-18!49;UBERON:0003080!7.97e-15!40;UBERON:0002780!4.61e-14!39;UBERON:0001890!4.61e-14!39;UBERON:0006240!4.61e-14!39;UBERON:0002020!5.25e-14!34;UBERON:0007811!8.40e-14!86;UBERON:0000153!3.56e-11!94;UBERON:0002021!5.93e-11!10;UBERON:0000411!5.93e-11!10;UBERON:0001950!5.93e-11!10;UBERON:0002791!7.09e-11!29;UBERON:0003528!7.09e-11!29;UBERON:0001893!7.09e-11!29;UBERON:0002619!2.61e-08!17;UBERON:0000956!4.00e-07!21;UBERON:0001869!4.00e-07!21;UBERON:0000203!4.00e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-35,54;UBERON:0002346,5.11e-35,64;UBERON:0003075,5.11e-35,64;UBERON:0007284,5.11e-35,64;UBERON:0001049,5.14e-32,52;UBERON:0005068,5.14e-32,52;UBERON:0006241,5.14e-32,52;UBERON:0007135,5.14e-32,52;UBERON:0010371,8.61e-30,73;UBERON:0001017,1.65e-28,73;UBERON:0004121,3.93e-28,95;UBERON:0000924,3.93e-28,95;UBERON:0006601,3.93e-28,95;UBERON:0001016,1.49e-27,75;UBERON:0000955,5.55e-27,47;UBERON:0006238,5.55e-27,47;UBERON:0002616,4.31e-25,46;UBERON:0003056,8.63e-25,49;UBERON:0002021,3.44e-24,10;UBERON:0000411,3.44e-24,10;UBERON:0001950,3.44e-24,10;UBERON:0002020,7.84e-24,34;UBERON:0010314,4.16e-22,92;UBERON:0003080,3.91e-20,40;UBERON:0003528,1.10e-18,29;UBERON:0002791,1.10e-18,29;UBERON:0001893,1.10e-18,29;UBERON:0002780,1.32e-18,39;UBERON:0001890,1.32e-18,39;UBERON:0006240,1.32e-18,39;UBERON:0002619,2.67e-16,17;UBERON:0000956,2.67e-15,21;UBERON:0001869,2.67e-15,21;UBERON:0000203,2.67e-15,21;UBERON:0003076,9.09e-13,12;UBERON:0003057,9.09e-13,12;UBERON:0000025,6.36e-11,114;UBERON:0004111,9.07e-10,122;UBERON:0002950,1.75e-09,4;UBERON:0001891,1.75e-09,4;UBERON:0009616,1.75e-09,4;UBERON:0010286,1.75e-09,4;UBERON:0002240,3.01e-08,6;UBERON:0005174,3.01e-08,6;UBERON:0001137,3.01e-08,6;UBERON:0000483,3.74e-08,174;UBERON:0000119,5.64e-08,176;UBERON:0002038,1.53e-07,3;UBERON:0009663,1.53e-07,3;UBERON:0009661,1.53e-07,3;UBERON:0000125,1.53e-07,3;UBERON:0002308,1.53e-07,3;UBERON:0004684,2.84e-07,3;UBERON:0002275,2.84e-07,3|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.98781686856452,0,0.0958454710182364,0,4.40463523997555,12.3856717942632,9.36999852863085,0.263772575460388,0.731901148819277,0,5.30447698102624,18.0084035210138,13.2934475565825,1.76777151284201,3.84403538157578,0.372798891650601,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,8.19786231632332,10.0534419270458,0,0,0,0,9.73639156131348,13.2675174817402,0.753926112677186,26.5951209894183,22.2472447877388,15.7918913865266,15.5751612545047,0,0,0,4.20883711772948,0,0,0.360124259610698,0.60281927134286,1.29269348387523,1.7935920839879,2.15513966487376,5.69147415625834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0714626446702,0.823236899034275,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,6.10092241953609,5.97779601620236,0,0,0,0.390438744296638,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,30.2042037436499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06395645178409,0,0,0.214337035031592,0.532020700926821,0.356737635204141,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,19.2015626489803,21.6352861158373,21.1971339972577,26.1216837162405,26.718218271055,28.7049681008086,21.6007200074178,22.9663813644352,34.4388230827996,21.7459330935764,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0.888986911206461,0.206035057238894,0.64183841918363,0,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.34461281373368,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0,0.789209134313529,0.407412341537585,0,0,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p6@Syt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20979 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000126278_5end | |||
|cluster_id=chr10:108446111..108446161,- | |||
|description=CAGE_peak_6_at_Syt1_5end | |||
|id=chr10:108446111..108446161,- | |||
|ontology_enrichment_celltype=CL:0000540!3.85e-07!33;CL:0000047!3.85e-07!33;CL:0000031!3.85e-07!33;CL:0000404!3.85e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.53e-07,3;CL:0000117,1.56e-07,23;CL:0000337,1.56e-07,23;CL:0002610,2.84e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.91e-26!71;UBERON:0003075!7.91e-26!71;UBERON:0007284!7.91e-26!71;UBERON:0000073!1.36e-23!75;UBERON:0001016!1.36e-23!75;UBERON:0004121!2.27e-23!102;UBERON:0000924!2.27e-23!102;UBERON:0006601!2.27e-23!102;UBERON:0001017!7.91e-23!73;UBERON:0005743!7.91e-23!73;UBERON:0000033!5.32e-22!63;UBERON:0001049!1.21e-20!52;UBERON:0005068!1.21e-20!52;UBERON:0006241!1.21e-20!52;UBERON:0007135!1.21e-20!52;UBERON:0000955!8.00e-20!50;UBERON:0006238!8.00e-20!50;UBERON:0002616!6.97e-19!49;UBERON:0003056!4.33e-18!49;UBERON:0003080!7.97e-15!40;UBERON:0002780!4.61e-14!39;UBERON:0001890!4.61e-14!39;UBERON:0006240!4.61e-14!39;UBERON:0002020!5.25e-14!34;UBERON:0007811!8.40e-14!86;UBERON:0000153!3.56e-11!94;UBERON:0002021!5.93e-11!10;UBERON:0000411!5.93e-11!10;UBERON:0001950!5.93e-11!10;UBERON:0002791!7.09e-11!29;UBERON:0003528!7.09e-11!29;UBERON:0001893!7.09e-11!29;UBERON:0002619!2.61e-08!17;UBERON:0000956!4.00e-07!21;UBERON:0001869!4.00e-07!21;UBERON:0000203!4.00e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-35,54;UBERON:0002346,5.11e-35,64;UBERON:0003075,5.11e-35,64;UBERON:0007284,5.11e-35,64;UBERON:0001049,5.14e-32,52;UBERON:0005068,5.14e-32,52;UBERON:0006241,5.14e-32,52;UBERON:0007135,5.14e-32,52;UBERON:0010371,8.61e-30,73;UBERON:0001017,1.65e-28,73;UBERON:0004121,3.93e-28,95;UBERON:0000924,3.93e-28,95;UBERON:0006601,3.93e-28,95;UBERON:0001016,1.49e-27,75;UBERON:0000955,5.55e-27,47;UBERON:0006238,5.55e-27,47;UBERON:0002616,4.31e-25,46;UBERON:0003056,8.63e-25,49;UBERON:0002021,3.44e-24,10;UBERON:0000411,3.44e-24,10;UBERON:0001950,3.44e-24,10;UBERON:0002020,7.84e-24,34;UBERON:0010314,4.16e-22,92;UBERON:0003080,3.91e-20,40;UBERON:0003528,1.10e-18,29;UBERON:0002791,1.10e-18,29;UBERON:0001893,1.10e-18,29;UBERON:0002780,1.32e-18,39;UBERON:0001890,1.32e-18,39;UBERON:0006240,1.32e-18,39;UBERON:0002619,2.67e-16,17;UBERON:0000956,2.67e-15,21;UBERON:0001869,2.67e-15,21;UBERON:0000203,2.67e-15,21;UBERON:0003076,9.09e-13,12;UBERON:0003057,9.09e-13,12;UBERON:0000025,6.36e-11,114;UBERON:0004111,9.07e-10,122;UBERON:0002950,1.75e-09,4;UBERON:0001891,1.75e-09,4;UBERON:0009616,1.75e-09,4;UBERON:0010286,1.75e-09,4;UBERON:0002240,3.01e-08,6;UBERON:0005174,3.01e-08,6;UBERON:0001137,3.01e-08,6;UBERON:0000483,3.74e-08,174;UBERON:0000119,5.64e-08,176;UBERON:0002038,1.53e-07,3;UBERON:0009663,1.53e-07,3;UBERON:0009661,1.53e-07,3;UBERON:0000125,1.53e-07,3;UBERON:0002308,1.53e-07,3;UBERON:0004684,2.84e-07,3;UBERON:0002275,2.84e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.98781686856452,0,0.0958454710182364,0,4.40463523997555,12.3856717942632,9.36999852863085,0.263772575460388,0.731901148819277,0,5.30447698102624,18.0084035210138,13.2934475565825,1.76777151284201,3.84403538157578,0.372798891650601,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,8.19786231632332,10.0534419270458,0,0,0,0,9.73639156131348,13.2675174817402,0.753926112677186,26.5951209894183,22.2472447877388,15.7918913865266,15.5751612545047,0,0,0,4.20883711772948,0,0,0.360124259610698,0.60281927134286,1.29269348387523,1.7935920839879,2.15513966487376,5.69147415625834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0714626446702,0.823236899034275,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,6.10092241953609,5.97779601620236,0,0,0,0.390438744296638,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,30.2042037436499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06395645178409,0,0,0.214337035031592,0.532020700926821,0.356737635204141,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,19.2015626489803,21.6352861158373,21.1971339972577,26.1216837162405,26.718218271055,28.7049681008086,21.6007200074178,22.9663813644352,34.4388230827996,21.7459330935764,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0.888986911206461,0.206035057238894,0.64183841918363,0,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.34461281373368,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0,0.789209134313529,0.407412341537585,0,0,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Syt1 | |||
}} |
Revision as of 20:31, 3 August 2015
Short description: | p6@Syt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Syt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000126278_5end |
EntrezGene: | 20979 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.53e-07 | 3 |
CNS neuron (sensu Vertebrata) | 1.56e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.56e-07 | 23 |
raphe nuclei neuron | 2.84e-07 | 3 |