FFCP PHASE1:Mm9::chr5:138182587..138182598,-: Difference between revisions
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{{FFCP|EntrezGene=243300|HGNC=|MCL_coexpression_id=22|UniProt=Q6PFX7,Q3URQ9|association_with_transcript=236bp_to_ENSMUST00000061789,ENSMUST00000119498,uc009adr.1,uc009ads.1_5end|description=CAGE_peak_6_at_6430598A04Rik_5end|id=chr5:138182587..138182598,-|ontology_enrichment_celltype=CL:0000117!3.25e-25!23;CL:0000337!3.25e-25!23;CL:0000540!3.09e-18!33;CL:0000047!3.09e-18!33;CL:0000031!3.09e-18!33;CL:0000404!3.09e-18!33;CL:0000393!3.84e-14!39;CL:0000211!3.84e-14!39;CL:0002319!4.47e-12!43;CL:0000221!1.27e-11!44;CL:0000133!1.27e-11!44;CL:0000055!2.65e-09!50;CL:0002609!6.41e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,7.24e-42,23;CL:0000337,7.24e-42,23;CL:0000540,8.91e-29,33;CL:0000047,8.91e-29,33;CL:0000031,8.91e-29,33;CL:0000404,8.91e-29,33;CL:0000393,3.91e-24,39;CL:0000211,3.91e-24,39;CL:0002319,9.33e-22,43;CL:0000221,3.14e-21,44;CL:0000133,3.14e-21,44;CL:0000120,2.59e-19,3;CL:0002613,5.18e-19,3;CL:0002321,8.82e-13,70;CL:0002611,1.88e-12,2;CL:0000723,1.86e-09,91;CL:0000048,1.86e-09,91;CL:0002609,5.14e-09,6;CL:0000034,9.08e-09,97;CL:0002612,1.11e-08,3;CL:0002608,1.73e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.63e-16!52;UBERON:0005068!3.63e-16!52;UBERON:0006241!3.63e-16!52;UBERON:0007135!3.63e-16!52;UBERON:0001017!4.93e-16!73;UBERON:0005743!4.93e-16!73;UBERON:0002020!7.66e-16!34;UBERON:0000073!2.82e-15!75;UBERON:0001016!2.82e-15!75;UBERON:0002346!1.60e-14!71;UBERON:0003075!1.60e-14!71;UBERON:0007284!1.60e-14!71;UBERON:0003056!9.46e-14!49;UBERON:0002616!2.57e-13!49;UBERON:0000955!7.18e-13!50;UBERON:0006238!7.18e-13!50;UBERON:0000033!9.60e-13!63;UBERON:0003080!1.83e-12!40;UBERON:0004121!1.26e-11!102;UBERON:0000924!1.26e-11!102;UBERON:0006601!1.26e-11!102;UBERON:0002780!1.32e-11!39;UBERON:0001890!1.32e-11!39;UBERON:0006240!1.32e-11!39;UBERON:0007811!5.99e-11!86;UBERON:0002791!6.58e-11!29;UBERON:0003528!6.58e-11!29;UBERON:0001893!6.58e-11!29;UBERON:0000153!1.91e-10!94;UBERON:0002420!4.78e-08!8;UBERON:0007245!4.78e-08!8;UBERON:0010009!4.78e-08!8;UBERON:0010011!4.78e-08!8;UBERON:0000454!4.78e-08!8;UBERON:0002298!2.35e-07!6;UBERON:0001948!2.75e-07!5;UBERON:0002315!2.75e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.76e-23,34;UBERON:0000369,9.03e-20,5;UBERON:0002435,9.03e-20,5;UBERON:0000204,9.03e-20,5;UBERON:0010082,9.03e-20,5;UBERON:0001948,9.73e-19,5;UBERON:0002315,9.73e-19,5;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002240,1.14e-15,6;UBERON:0005174,1.14e-15,6;UBERON:0001137,1.14e-15,6;UBERON:0001049,9.55e-15,52;UBERON:0005068,9.55e-15,52;UBERON:0006241,9.55e-15,52;UBERON:0007135,9.55e-15,52;UBERON:0000073,3.80e-14,54;UBERON:0002420,1.85e-12,8;UBERON:0007245,1.85e-12,8;UBERON:0010009,1.85e-12,8;UBERON:0010011,1.85e-12,8;UBERON:0000454,1.85e-12,8;UBERON:0002256,1.88e-12,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0003528,3.57e-12,29;UBERON:0002791,3.57e-12,29;UBERON:0001893,3.57e-12,29;UBERON:0002346,1.04e-11,64;UBERON:0003075,1.04e-11,64;UBERON:0007284,1.04e-11,64;UBERON:0010371,4.45e-10,73;UBERON:0002780,7.68e-09,39;UBERON:0001890,7.68e-09,39;UBERON:0006240,7.68e-09,39;UBERON:0002257,1.11e-08,3;UBERON:0003080,1.34e-08,40;UBERON:0003076,5.90e-08,12;UBERON:0003057,5.90e-08,12;UBERON:0010314,1.13e-07,92;UBERON:0002616,2.30e-07,46;UBERON:0000955,3.44e-07,47;UBERON:0006238,3.44e-07,47;UBERON:0003056,7.35e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,4.43681982454325,0,0,0,0,0,0,0,0.311068836925433,0.810035629990144,1.05162480675691,1.71390590642282,1.32521124570968,1.34739879136449,1.43768206527355,0.919218786610021,0,0.893811366596314,0.768032666281217,3.82470234417562,2.47016637726506,3.12548022334056,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,1.56608848879013,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0,2.1361239859187,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.515559547031063,0,0,0,0,0,1.55328093525546,0.62272408550506,0.399024873401031,0.512200817262403,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.591026894253381,0,0.154936841185966,0.192906610981141,0.999242311751784,0,0.214871054048298,0,0.220591419119515,0|short_description=p6@6430598A04Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243300 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PFX7,uniprot:Q3URQ9 | |||
|association_with_transcript=236bp_to_ENSMUST00000061789,ENSMUST00000119498,uc009adr.1,uc009ads.1_5end | |||
|cluster_id=chr5:138182587..138182598,- | |||
|description=CAGE_peak_6_at_6430598A04Rik_5end | |||
|id=chr5:138182587..138182598,- | |||
|ontology_enrichment_celltype=CL:0000117!3.25e-25!23;CL:0000337!3.25e-25!23;CL:0000540!3.09e-18!33;CL:0000047!3.09e-18!33;CL:0000031!3.09e-18!33;CL:0000404!3.09e-18!33;CL:0000393!3.84e-14!39;CL:0000211!3.84e-14!39;CL:0002319!4.47e-12!43;CL:0000221!1.27e-11!44;CL:0000133!1.27e-11!44;CL:0000055!2.65e-09!50;CL:0002609!6.41e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.24e-42,23;CL:0000337,7.24e-42,23;CL:0000540,8.91e-29,33;CL:0000047,8.91e-29,33;CL:0000031,8.91e-29,33;CL:0000404,8.91e-29,33;CL:0000393,3.91e-24,39;CL:0000211,3.91e-24,39;CL:0002319,9.33e-22,43;CL:0000221,3.14e-21,44;CL:0000133,3.14e-21,44;CL:0000120,2.59e-19,3;CL:0002613,5.18e-19,3;CL:0002321,8.82e-13,70;CL:0002611,1.88e-12,2;CL:0000723,1.86e-09,91;CL:0000048,1.86e-09,91;CL:0002609,5.14e-09,6;CL:0000034,9.08e-09,97;CL:0002612,1.11e-08,3;CL:0002608,1.73e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.63e-16!52;UBERON:0005068!3.63e-16!52;UBERON:0006241!3.63e-16!52;UBERON:0007135!3.63e-16!52;UBERON:0001017!4.93e-16!73;UBERON:0005743!4.93e-16!73;UBERON:0002020!7.66e-16!34;UBERON:0000073!2.82e-15!75;UBERON:0001016!2.82e-15!75;UBERON:0002346!1.60e-14!71;UBERON:0003075!1.60e-14!71;UBERON:0007284!1.60e-14!71;UBERON:0003056!9.46e-14!49;UBERON:0002616!2.57e-13!49;UBERON:0000955!7.18e-13!50;UBERON:0006238!7.18e-13!50;UBERON:0000033!9.60e-13!63;UBERON:0003080!1.83e-12!40;UBERON:0004121!1.26e-11!102;UBERON:0000924!1.26e-11!102;UBERON:0006601!1.26e-11!102;UBERON:0002780!1.32e-11!39;UBERON:0001890!1.32e-11!39;UBERON:0006240!1.32e-11!39;UBERON:0007811!5.99e-11!86;UBERON:0002791!6.58e-11!29;UBERON:0003528!6.58e-11!29;UBERON:0001893!6.58e-11!29;UBERON:0000153!1.91e-10!94;UBERON:0002420!4.78e-08!8;UBERON:0007245!4.78e-08!8;UBERON:0010009!4.78e-08!8;UBERON:0010011!4.78e-08!8;UBERON:0000454!4.78e-08!8;UBERON:0002298!2.35e-07!6;UBERON:0001948!2.75e-07!5;UBERON:0002315!2.75e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.76e-23,34;UBERON:0000369,9.03e-20,5;UBERON:0002435,9.03e-20,5;UBERON:0000204,9.03e-20,5;UBERON:0010082,9.03e-20,5;UBERON:0001948,9.73e-19,5;UBERON:0002315,9.73e-19,5;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002240,1.14e-15,6;UBERON:0005174,1.14e-15,6;UBERON:0001137,1.14e-15,6;UBERON:0001049,9.55e-15,52;UBERON:0005068,9.55e-15,52;UBERON:0006241,9.55e-15,52;UBERON:0007135,9.55e-15,52;UBERON:0000073,3.80e-14,54;UBERON:0002420,1.85e-12,8;UBERON:0007245,1.85e-12,8;UBERON:0010009,1.85e-12,8;UBERON:0010011,1.85e-12,8;UBERON:0000454,1.85e-12,8;UBERON:0002256,1.88e-12,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0003528,3.57e-12,29;UBERON:0002791,3.57e-12,29;UBERON:0001893,3.57e-12,29;UBERON:0002346,1.04e-11,64;UBERON:0003075,1.04e-11,64;UBERON:0007284,1.04e-11,64;UBERON:0010371,4.45e-10,73;UBERON:0002780,7.68e-09,39;UBERON:0001890,7.68e-09,39;UBERON:0006240,7.68e-09,39;UBERON:0002257,1.11e-08,3;UBERON:0003080,1.34e-08,40;UBERON:0003076,5.90e-08,12;UBERON:0003057,5.90e-08,12;UBERON:0010314,1.13e-07,92;UBERON:0002616,2.30e-07,46;UBERON:0000955,3.44e-07,47;UBERON:0006238,3.44e-07,47;UBERON:0003056,7.35e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,4.43681982454325,0,0,0,0,0,0,0,0.311068836925433,0.810035629990144,1.05162480675691,1.71390590642282,1.32521124570968,1.34739879136449,1.43768206527355,0.919218786610021,0,0.893811366596314,0.768032666281217,3.82470234417562,2.47016637726506,3.12548022334056,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,1.56608848879013,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0,2.1361239859187,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.515559547031063,0,0,0,0,0,1.55328093525546,0.62272408550506,0.399024873401031,0.512200817262403,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.591026894253381,0,0.154936841185966,0.192906610981141,0.999242311751784,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p6@6430598A04Rik | |||
}} |
Revision as of 21:49, 3 August 2015
Short description: | p6@6430598A04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_6430598A04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 236bp_to_ENSMUST00000061789, ENSMUST00000119498, uc009adr.1, uc009ads.1_5end |
EntrezGene: | 243300 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.24e-42 | 23 |
neuroblast (sensu Vertebrata) | 7.24e-42 | 23 |
neuron | 8.91e-29 | 33 |
neuronal stem cell | 8.91e-29 | 33 |
neuroblast | 8.91e-29 | 33 |
electrically signaling cell | 8.91e-29 | 33 |
electrically responsive cell | 3.91e-24 | 39 |
electrically active cell | 3.91e-24 | 39 |
neural cell | 9.33e-22 | 43 |
ectodermal cell | 3.14e-21 | 44 |
neurectodermal cell | 3.14e-21 | 44 |
granule cell | 2.59e-19 | 3 |
striatum neuron | 5.18e-19 | 3 |
embryonic cell | 8.82e-13 | 70 |
neuron of the dorsal spinal cord | 1.88e-12 | 2 |
somatic stem cell | 1.86e-09 | 91 |
multi fate stem cell | 1.86e-09 | 91 |
neuron of cerebral cortex | 5.14e-09 | 6 |
stem cell | 9.08e-09 | 97 |
neuron of the ventral spinal cord | 1.11e-08 | 3 |
hippocampal neuron | 1.73e-08 | 3 |