FFCP PHASE1:Mm9::chr14:112074335..112074341,+: Difference between revisions
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{{FFCP|EntrezGene=75409|HGNC=|MCL_coexpression_id=1|UniProt=Q810B7,Q69ZV6|association_with_transcript=0bp_to_ENSMUST00000042767,NM_198865,uc011zpr.1_5end|description=CAGE_peak_2_at_Slitrk5_5end|id=chr14:112074335..112074341,+|ontology_enrichment_celltype=CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0002319!3.58e-15!43;CL:0000221!3.69e-15!44;CL:0000133!3.69e-15!44;CL:0000117!1.31e-12!23;CL:0000337!1.31e-12!23;CL:0000393!4.33e-12!39;CL:0000211!4.33e-12!39;CL:0000055!1.01e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.39e-22,33;CL:0000047,3.39e-22,33;CL:0000031,3.39e-22,33;CL:0000404,3.39e-22,33;CL:0000117,3.04e-20,23;CL:0000337,3.04e-20,23;CL:0000393,2.63e-17,39;CL:0000211,2.63e-17,39;CL:0002319,3.98e-17,43;CL:0000221,1.63e-16,44;CL:0000133,1.63e-16,44;CL:0002321,7.22e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.45e-36!73;UBERON:0005743!5.45e-36!73;UBERON:0000073!2.29e-35!75;UBERON:0001016!2.29e-35!75;UBERON:0004121!2.57e-28!102;UBERON:0000924!2.57e-28!102;UBERON:0006601!2.57e-28!102;UBERON:0001049!1.30e-26!52;UBERON:0005068!1.30e-26!52;UBERON:0006241!1.30e-26!52;UBERON:0007135!1.30e-26!52;UBERON:0002346!2.82e-26!71;UBERON:0003075!2.82e-26!71;UBERON:0007284!2.82e-26!71;UBERON:0000955!4.66e-25!50;UBERON:0006238!4.66e-25!50;UBERON:0000033!1.79e-24!63;UBERON:0002616!2.58e-24!49;UBERON:0003056!3.80e-22!49;UBERON:0003080!8.91e-21!40;UBERON:0002020!2.66e-20!34;UBERON:0002780!4.12e-20!39;UBERON:0001890!4.12e-20!39;UBERON:0006240!4.12e-20!39;UBERON:0002791!5.77e-17!29;UBERON:0003528!5.77e-17!29;UBERON:0001893!5.77e-17!29;UBERON:0007811!1.58e-12!86;UBERON:0000956!4.50e-12!21;UBERON:0001869!4.50e-12!21;UBERON:0000203!4.50e-12!21;UBERON:0000153!3.17e-11!94;UBERON:0002619!8.06e-10!17;UBERON:0002021!7.24e-09!10;UBERON:0000411!7.24e-09!10;UBERON:0001950!7.24e-09!10;UBERON:0000025!5.33e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-45,73;UBERON:0001016,8.68e-44,75;UBERON:0000073,4.93e-37,54;UBERON:0004121,2.30e-35,95;UBERON:0000924,2.30e-35,95;UBERON:0006601,2.30e-35,95;UBERON:0001049,5.05e-35,52;UBERON:0005068,5.05e-35,52;UBERON:0006241,5.05e-35,52;UBERON:0007135,5.05e-35,52;UBERON:0002346,6.85e-34,64;UBERON:0003075,6.85e-34,64;UBERON:0007284,6.85e-34,64;UBERON:0002020,4.14e-30,34;UBERON:0000955,1.55e-29,47;UBERON:0006238,1.55e-29,47;UBERON:0002616,2.09e-28,46;UBERON:0010371,1.05e-27,73;UBERON:0003080,1.90e-26,40;UBERON:0002780,2.08e-25,39;UBERON:0001890,2.08e-25,39;UBERON:0006240,2.08e-25,39;UBERON:0003528,1.10e-24,29;UBERON:0002791,1.10e-24,29;UBERON:0001893,1.10e-24,29;UBERON:0003056,1.90e-24,49;UBERON:0010314,7.01e-22,92;UBERON:0000956,9.40e-17,21;UBERON:0001869,9.40e-17,21;UBERON:0000203,9.40e-17,21;UBERON:0002021,1.59e-13,10;UBERON:0000411,1.59e-13,10;UBERON:0001950,1.59e-13,10;UBERON:0002619,4.08e-13,17;UBERON:0000025,2.24e-10,114;UBERON:0002420,4.39e-09,8;UBERON:0007245,4.39e-09,8;UBERON:0010009,4.39e-09,8;UBERON:0010011,4.39e-09,8;UBERON:0000454,4.39e-09,8;UBERON:0004111,7.99e-09,122;UBERON:0003076,1.02e-08,12;UBERON:0003057,1.02e-08,12;UBERON:0011216,1.29e-07,194;UBERON:0002240,1.40e-07,6;UBERON:0005174,1.40e-07,6;UBERON:0001137,1.40e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.872100625521786,0.878744730937887,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.42779753031517,5.28990979272033,3.80298842103708,0.677689064138264,0,0,0,0,1.19840044207362,0.768436610643109,2.17748185847803,3.51015439662396,3.57552434297349,5.14171771926846,4.8591079009355,2.20483438586917,2.01275489138296,0,5.50579404996943,3.44755812830007,3.68655679814984,3.95658863190582,3.29355516968675,3.12548022334056,3.62937898701795,7.31591393041184,4.5839474333043,4.12480019663135,5.55249555116501,5.96478226640962,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,7.11066703153331,0,0,0,0.45673551887624,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,2.34224637609238,3.14170060220183,0.255457055208591,0,0,0,4.94309110035915,6.40500843946077,5.27748278874031,7.64827008846016,13.2972037811772,3.53239675751252,4.70499662896497,0.611036183101898,0,0,0.631325567659422,0.260240885925407,1.37941262660084,0.360124259610698,1.05493372485001,1.29269348387523,0.896796041993948,0.562210347358373,1.03481348295606,0,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,0,0,1.39323986772945,0,0,0,1.65700618028402,2.34526059981096,1.62055855314913,0.946978942340841,0.983821158737019,0.462801338662135,0.465067889500816,0.268273401399619,0.467061369468678,0.329119699826961,0,0,0.146199987425332,0,0,7.57043814830858,4.32199371992995,0,0,1.70630600428187,0.464473343720877,0.128867461322093,0.201683524623343,0.66713413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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75409 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q810B7,uniprot:Q69ZV6 | |||
|association_with_transcript=0bp_to_ENSMUST00000042767,NM_198865,uc011zpr.1_5end | |||
|cluster_id=chr14:112074335..112074341,+ | |||
|description=CAGE_peak_2_at_Slitrk5_5end | |||
|id=chr14:112074335..112074341,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0002319!3.58e-15!43;CL:0000221!3.69e-15!44;CL:0000133!3.69e-15!44;CL:0000117!1.31e-12!23;CL:0000337!1.31e-12!23;CL:0000393!4.33e-12!39;CL:0000211!4.33e-12!39;CL:0000055!1.01e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.39e-22,33;CL:0000047,3.39e-22,33;CL:0000031,3.39e-22,33;CL:0000404,3.39e-22,33;CL:0000117,3.04e-20,23;CL:0000337,3.04e-20,23;CL:0000393,2.63e-17,39;CL:0000211,2.63e-17,39;CL:0002319,3.98e-17,43;CL:0000221,1.63e-16,44;CL:0000133,1.63e-16,44;CL:0002321,7.22e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.45e-36!73;UBERON:0005743!5.45e-36!73;UBERON:0000073!2.29e-35!75;UBERON:0001016!2.29e-35!75;UBERON:0004121!2.57e-28!102;UBERON:0000924!2.57e-28!102;UBERON:0006601!2.57e-28!102;UBERON:0001049!1.30e-26!52;UBERON:0005068!1.30e-26!52;UBERON:0006241!1.30e-26!52;UBERON:0007135!1.30e-26!52;UBERON:0002346!2.82e-26!71;UBERON:0003075!2.82e-26!71;UBERON:0007284!2.82e-26!71;UBERON:0000955!4.66e-25!50;UBERON:0006238!4.66e-25!50;UBERON:0000033!1.79e-24!63;UBERON:0002616!2.58e-24!49;UBERON:0003056!3.80e-22!49;UBERON:0003080!8.91e-21!40;UBERON:0002020!2.66e-20!34;UBERON:0002780!4.12e-20!39;UBERON:0001890!4.12e-20!39;UBERON:0006240!4.12e-20!39;UBERON:0002791!5.77e-17!29;UBERON:0003528!5.77e-17!29;UBERON:0001893!5.77e-17!29;UBERON:0007811!1.58e-12!86;UBERON:0000956!4.50e-12!21;UBERON:0001869!4.50e-12!21;UBERON:0000203!4.50e-12!21;UBERON:0000153!3.17e-11!94;UBERON:0002619!8.06e-10!17;UBERON:0002021!7.24e-09!10;UBERON:0000411!7.24e-09!10;UBERON:0001950!7.24e-09!10;UBERON:0000025!5.33e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-45,73;UBERON:0001016,8.68e-44,75;UBERON:0000073,4.93e-37,54;UBERON:0004121,2.30e-35,95;UBERON:0000924,2.30e-35,95;UBERON:0006601,2.30e-35,95;UBERON:0001049,5.05e-35,52;UBERON:0005068,5.05e-35,52;UBERON:0006241,5.05e-35,52;UBERON:0007135,5.05e-35,52;UBERON:0002346,6.85e-34,64;UBERON:0003075,6.85e-34,64;UBERON:0007284,6.85e-34,64;UBERON:0002020,4.14e-30,34;UBERON:0000955,1.55e-29,47;UBERON:0006238,1.55e-29,47;UBERON:0002616,2.09e-28,46;UBERON:0010371,1.05e-27,73;UBERON:0003080,1.90e-26,40;UBERON:0002780,2.08e-25,39;UBERON:0001890,2.08e-25,39;UBERON:0006240,2.08e-25,39;UBERON:0003528,1.10e-24,29;UBERON:0002791,1.10e-24,29;UBERON:0001893,1.10e-24,29;UBERON:0003056,1.90e-24,49;UBERON:0010314,7.01e-22,92;UBERON:0000956,9.40e-17,21;UBERON:0001869,9.40e-17,21;UBERON:0000203,9.40e-17,21;UBERON:0002021,1.59e-13,10;UBERON:0000411,1.59e-13,10;UBERON:0001950,1.59e-13,10;UBERON:0002619,4.08e-13,17;UBERON:0000025,2.24e-10,114;UBERON:0002420,4.39e-09,8;UBERON:0007245,4.39e-09,8;UBERON:0010009,4.39e-09,8;UBERON:0010011,4.39e-09,8;UBERON:0000454,4.39e-09,8;UBERON:0004111,7.99e-09,122;UBERON:0003076,1.02e-08,12;UBERON:0003057,1.02e-08,12;UBERON:0011216,1.29e-07,194;UBERON:0002240,1.40e-07,6;UBERON:0005174,1.40e-07,6;UBERON:0001137,1.40e-07,6 | |||
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|short_description=p2@Slitrk5 | |||
}} |
Revision as of 23:06, 3 August 2015
Short description: | p2@Slitrk5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slitrk5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000042767, NM_198865, uc011zpr.1_5end |
EntrezGene: | 75409 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.39e-22 | 33 |
neuronal stem cell | 3.39e-22 | 33 |
neuroblast | 3.39e-22 | 33 |
electrically signaling cell | 3.39e-22 | 33 |
CNS neuron (sensu Vertebrata) | 3.04e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.04e-20 | 23 |
electrically responsive cell | 2.63e-17 | 39 |
electrically active cell | 2.63e-17 | 39 |
neural cell | 3.98e-17 | 43 |
ectodermal cell | 1.63e-16 | 44 |
neurectodermal cell | 1.63e-16 | 44 |
embryonic cell | 7.22e-08 | 70 |