FFCP PHASE1:Mm9::chr3:8545615..8545628,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1941|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:8545615..8545628,+|id=chr3:8545615..8545628,+|ontology_enrichment_celltype=CL:0002319!9.41e-29!43;CL:0000221!7.64e-28!44;CL:0000133!7.64e-28!44;CL:0000117!1.48e-25!23;CL:0000337!1.48e-25!23;CL:0000055!3.65e-23!50;CL:0000540!2.25e-22!33;CL:0000047!2.25e-22!33;CL:0000031!2.25e-22!33;CL:0000404!2.25e-22!33;CL:0000393!1.31e-17!39;CL:0000211!1.31e-17!39;CL:0002321!1.71e-13!70;CL:0000220!1.71e-13!70;CL:0002609!6.42e-09!6;CL:0000333!4.50e-07!10;CL:0000095!4.50e-07!10;CL:0000243!4.50e-07!10;CL:0000123!4.50e-07!10;CL:0000125!4.50e-07!10;CL:0000030!4.50e-07!10;CL:0000339!4.50e-07!10|ontology_enrichment_celltype_v019_2=CL:0000117,5.80e-55,23;CL:0000337,5.80e-55,23;CL:0002319,1.12e-42,43;CL:0000221,1.36e-41,44;CL:0000133,1.36e-41,44;CL:0000540,5.89e-37,33;CL:0000047,5.89e-37,33;CL:0000031,5.89e-37,33;CL:0000404,5.89e-37,33;CL:0000393,1.41e-30,39;CL:0000211,1.41e-30,39;CL:0002321,3.06e-24,70;CL:0002609,1.77e-17,6;CL:0000128,2.06e-11,6;CL:0000126,2.06e-11,6;CL:0000127,2.06e-11,6;CL:0002612,1.43e-10,3;CL:0000723,1.65e-10,91;CL:0000048,1.65e-10,91;CL:0000120,2.89e-10,3;CL:0002613,3.10e-10,3;CL:0002610,6.61e-10,3;CL:0000034,1.40e-09,97;CL:0002608,1.49e-09,3;CL:0002453,1.69e-08,8;CL:0000333,9.54e-07,10;CL:0000095,9.54e-07,10;CL:0000243,9.54e-07,10;CL:0000123,9.54e-07,10;CL:0000125,9.54e-07,10;CL:0000030,9.54e-07,10;CL:0000339,9.54e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.08e-35!75;UBERON:0001016!3.08e-35!75;UBERON:0001017!1.25e-33!73;UBERON:0005743!1.25e-33!73;UBERON:0004121!1.43e-26!102;UBERON:0000924!1.43e-26!102;UBERON:0006601!1.43e-26!102;UBERON:0002020!6.05e-26!34;UBERON:0001049!1.65e-24!52;UBERON:0005068!1.65e-24!52;UBERON:0006241!1.65e-24!52;UBERON:0007135!1.65e-24!52;UBERON:0002346!4.81e-22!71;UBERON:0003075!4.81e-22!71;UBERON:0007284!4.81e-22!71;UBERON:0002616!2.38e-21!49;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002791!1.38e-19!29;UBERON:0003528!1.38e-19!29;UBERON:0001893!1.38e-19!29;UBERON:0000956!5.33e-17!21;UBERON:0001869!5.33e-17!21;UBERON:0000203!5.33e-17!21;UBERON:0000033!1.34e-16!63;UBERON:0003080!1.06e-14!40;UBERON:0002780!6.82e-14!39;UBERON:0001890!6.82e-14!39;UBERON:0006240!6.82e-14!39;UBERON:0003056!9.03e-13!49;UBERON:0002619!1.04e-12!17;UBERON:0003076!2.90e-11!12;UBERON:0003057!2.90e-11!12;UBERON:0007811!4.36e-10!86;UBERON:0001954!3.73e-09!7;UBERON:0003022!3.73e-09!7;UBERON:0002421!3.73e-09!7;UBERON:0000349!3.73e-09!7;UBERON:0002600!3.73e-09!7;UBERON:0002240!1.15e-08!6;UBERON:0005174!1.15e-08!6;UBERON:0001137!1.15e-08!6;UBERON:0000153!2.16e-08!94;UBERON:0001948!5.54e-08!5;UBERON:0002315!5.54e-08!5;UBERON:0000025!4.66e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.94e-37,34;UBERON:0001017,1.03e-33,73;UBERON:0001016,1.14e-32,75;UBERON:0000073,8.95e-32,54;UBERON:0001049,5.68e-25,52;UBERON:0005068,5.68e-25,52;UBERON:0006241,5.68e-25,52;UBERON:0007135,5.68e-25,52;UBERON:0003528,6.71e-25,29;UBERON:0002791,6.71e-25,29;UBERON:0001893,6.71e-25,29;UBERON:0004121,1.17e-24,95;UBERON:0000924,1.17e-24,95;UBERON:0006601,1.17e-24,95;UBERON:0000956,7.26e-20,21;UBERON:0001869,7.26e-20,21;UBERON:0000203,7.26e-20,21;UBERON:0002346,2.13e-19,64;UBERON:0003075,2.13e-19,64;UBERON:0007284,2.13e-19,64;UBERON:0002780,1.36e-17,39;UBERON:0001890,1.36e-17,39;UBERON:0006240,1.36e-17,39;UBERON:0003080,4.61e-17,40;UBERON:0010371,2.03e-16,73;UBERON:0002616,2.58e-16,46;UBERON:0000955,6.90e-16,47;UBERON:0006238,6.90e-16,47;UBERON:0001948,1.86e-15,5;UBERON:0002315,1.86e-15,5;UBERON:0002619,2.46e-14,17;UBERON:0003056,2.85e-13,49;UBERON:0002240,7.90e-13,6;UBERON:0005174,7.90e-13,6;UBERON:0001137,7.90e-13,6;UBERON:0010314,4.85e-12,92;UBERON:0002257,1.43e-10,3;UBERON:0001954,3.86e-10,7;UBERON:0003022,3.86e-10,7;UBERON:0002421,3.86e-10,7;UBERON:0000349,3.86e-10,7;UBERON:0002600,3.86e-10,7;UBERON:0004684,6.61e-10,3;UBERON:0002275,6.61e-10,3;UBERON:0011216,3.24e-09,194;UBERON:0000025,8.55e-09,114;UBERON:0003076,1.25e-08,12;UBERON:0003057,1.25e-08,12;UBERON:0004111,6.62e-08,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,4.39372365468944,2.52758868796568,4.19959264876088,5.75010257459886,0,0,0,0,0,0,14.7691016427506,31.2104677770499,11.4089652631112,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,7.98410014775278,9.99043943654511,10.7265730289205,5.14171771926846,4.8591079009355,8.32937434661688,11.5973019932066,7.35375029288017,9.91042928994498,13.2794831608595,14.7462271925994,11.0784481693363,22.780423257,17.7110545989298,2.51264699101243,0,0,33.5876587439981,29.1861945638161,17.5215479075783,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0.452114453507145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.03111909406213,1.37016503954128,1.5107877947794,1.35004500046361,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr3:8545615..8545628,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1941 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:8545615..8545628,+ | |||
|description=CAGE_peak_at_chr3:8545615..8545628,+ | |||
|id=chr3:8545615..8545628,+ | |||
|ontology_enrichment_celltype=CL:0002319!9.41e-29!43;CL:0000221!7.64e-28!44;CL:0000133!7.64e-28!44;CL:0000117!1.48e-25!23;CL:0000337!1.48e-25!23;CL:0000055!3.65e-23!50;CL:0000540!2.25e-22!33;CL:0000047!2.25e-22!33;CL:0000031!2.25e-22!33;CL:0000404!2.25e-22!33;CL:0000393!1.31e-17!39;CL:0000211!1.31e-17!39;CL:0002321!1.71e-13!70;CL:0000220!1.71e-13!70;CL:0002609!6.42e-09!6;CL:0000333!4.50e-07!10;CL:0000095!4.50e-07!10;CL:0000243!4.50e-07!10;CL:0000123!4.50e-07!10;CL:0000125!4.50e-07!10;CL:0000030!4.50e-07!10;CL:0000339!4.50e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.80e-55,23;CL:0000337,5.80e-55,23;CL:0002319,1.12e-42,43;CL:0000221,1.36e-41,44;CL:0000133,1.36e-41,44;CL:0000540,5.89e-37,33;CL:0000047,5.89e-37,33;CL:0000031,5.89e-37,33;CL:0000404,5.89e-37,33;CL:0000393,1.41e-30,39;CL:0000211,1.41e-30,39;CL:0002321,3.06e-24,70;CL:0002609,1.77e-17,6;CL:0000128,2.06e-11,6;CL:0000126,2.06e-11,6;CL:0000127,2.06e-11,6;CL:0002612,1.43e-10,3;CL:0000723,1.65e-10,91;CL:0000048,1.65e-10,91;CL:0000120,2.89e-10,3;CL:0002613,3.10e-10,3;CL:0002610,6.61e-10,3;CL:0000034,1.40e-09,97;CL:0002608,1.49e-09,3;CL:0002453,1.69e-08,8;CL:0000333,9.54e-07,10;CL:0000095,9.54e-07,10;CL:0000243,9.54e-07,10;CL:0000123,9.54e-07,10;CL:0000125,9.54e-07,10;CL:0000030,9.54e-07,10;CL:0000339,9.54e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.08e-35!75;UBERON:0001016!3.08e-35!75;UBERON:0001017!1.25e-33!73;UBERON:0005743!1.25e-33!73;UBERON:0004121!1.43e-26!102;UBERON:0000924!1.43e-26!102;UBERON:0006601!1.43e-26!102;UBERON:0002020!6.05e-26!34;UBERON:0001049!1.65e-24!52;UBERON:0005068!1.65e-24!52;UBERON:0006241!1.65e-24!52;UBERON:0007135!1.65e-24!52;UBERON:0002346!4.81e-22!71;UBERON:0003075!4.81e-22!71;UBERON:0007284!4.81e-22!71;UBERON:0002616!2.38e-21!49;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002791!1.38e-19!29;UBERON:0003528!1.38e-19!29;UBERON:0001893!1.38e-19!29;UBERON:0000956!5.33e-17!21;UBERON:0001869!5.33e-17!21;UBERON:0000203!5.33e-17!21;UBERON:0000033!1.34e-16!63;UBERON:0003080!1.06e-14!40;UBERON:0002780!6.82e-14!39;UBERON:0001890!6.82e-14!39;UBERON:0006240!6.82e-14!39;UBERON:0003056!9.03e-13!49;UBERON:0002619!1.04e-12!17;UBERON:0003076!2.90e-11!12;UBERON:0003057!2.90e-11!12;UBERON:0007811!4.36e-10!86;UBERON:0001954!3.73e-09!7;UBERON:0003022!3.73e-09!7;UBERON:0002421!3.73e-09!7;UBERON:0000349!3.73e-09!7;UBERON:0002600!3.73e-09!7;UBERON:0002240!1.15e-08!6;UBERON:0005174!1.15e-08!6;UBERON:0001137!1.15e-08!6;UBERON:0000153!2.16e-08!94;UBERON:0001948!5.54e-08!5;UBERON:0002315!5.54e-08!5;UBERON:0000025!4.66e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.94e-37,34;UBERON:0001017,1.03e-33,73;UBERON:0001016,1.14e-32,75;UBERON:0000073,8.95e-32,54;UBERON:0001049,5.68e-25,52;UBERON:0005068,5.68e-25,52;UBERON:0006241,5.68e-25,52;UBERON:0007135,5.68e-25,52;UBERON:0003528,6.71e-25,29;UBERON:0002791,6.71e-25,29;UBERON:0001893,6.71e-25,29;UBERON:0004121,1.17e-24,95;UBERON:0000924,1.17e-24,95;UBERON:0006601,1.17e-24,95;UBERON:0000956,7.26e-20,21;UBERON:0001869,7.26e-20,21;UBERON:0000203,7.26e-20,21;UBERON:0002346,2.13e-19,64;UBERON:0003075,2.13e-19,64;UBERON:0007284,2.13e-19,64;UBERON:0002780,1.36e-17,39;UBERON:0001890,1.36e-17,39;UBERON:0006240,1.36e-17,39;UBERON:0003080,4.61e-17,40;UBERON:0010371,2.03e-16,73;UBERON:0002616,2.58e-16,46;UBERON:0000955,6.90e-16,47;UBERON:0006238,6.90e-16,47;UBERON:0001948,1.86e-15,5;UBERON:0002315,1.86e-15,5;UBERON:0002619,2.46e-14,17;UBERON:0003056,2.85e-13,49;UBERON:0002240,7.90e-13,6;UBERON:0005174,7.90e-13,6;UBERON:0001137,7.90e-13,6;UBERON:0010314,4.85e-12,92;UBERON:0002257,1.43e-10,3;UBERON:0001954,3.86e-10,7;UBERON:0003022,3.86e-10,7;UBERON:0002421,3.86e-10,7;UBERON:0000349,3.86e-10,7;UBERON:0002600,3.86e-10,7;UBERON:0004684,6.61e-10,3;UBERON:0002275,6.61e-10,3;UBERON:0011216,3.24e-09,194;UBERON:0000025,8.55e-09,114;UBERON:0003076,1.25e-08,12;UBERON:0003057,1.25e-08,12;UBERON:0004111,6.62e-08,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,4.39372365468944,2.52758868796568,4.19959264876088,5.75010257459886,0,0,0,0,0,0,14.7691016427506,31.2104677770499,11.4089652631112,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,7.98410014775278,9.99043943654511,10.7265730289205,5.14171771926846,4.8591079009355,8.32937434661688,11.5973019932066,7.35375029288017,9.91042928994498,13.2794831608595,14.7462271925994,11.0784481693363,22.780423257,17.7110545989298,2.51264699101243,0,0,33.5876587439981,29.1861945638161,17.5215479075783,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0.452114453507145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.03111909406213,1.37016503954128,1.5107877947794,1.35004500046361,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr3:8545615..8545628,+ | |||
}} |
Latest revision as of 02:30, 4 August 2015
Short description: | p@chr3:8545615..8545628, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:8545615..8545628, + |
Coexpression cluster: | MCL_coexpression_mm9:1941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.80e-55 | 23 |
neuroblast (sensu Vertebrata) | 5.80e-55 | 23 |
neural cell | 1.12e-42 | 43 |
ectodermal cell | 1.36e-41 | 44 |
neurectodermal cell | 1.36e-41 | 44 |
neuron | 5.89e-37 | 33 |
neuronal stem cell | 5.89e-37 | 33 |
neuroblast | 5.89e-37 | 33 |
electrically signaling cell | 5.89e-37 | 33 |
electrically responsive cell | 1.41e-30 | 39 |
electrically active cell | 1.41e-30 | 39 |
embryonic cell | 3.06e-24 | 70 |
neuron of cerebral cortex | 1.77e-17 | 6 |
oligodendrocyte | 2.06e-11 | 6 |
macroglial cell | 2.06e-11 | 6 |
astrocyte | 2.06e-11 | 6 |
neuron of the ventral spinal cord | 1.43e-10 | 3 |
somatic stem cell | 1.65e-10 | 91 |
multi fate stem cell | 1.65e-10 | 91 |
granule cell | 2.89e-10 | 3 |
striatum neuron | 3.10e-10 | 3 |
raphe nuclei neuron | 6.61e-10 | 3 |
stem cell | 1.40e-09 | 97 |
hippocampal neuron | 1.49e-09 | 3 |
oligodendrocyte precursor cell | 1.69e-08 | 8 |
migratory neural crest cell | 9.54e-07 | 10 |
neuron associated cell | 9.54e-07 | 10 |
glial cell (sensu Vertebrata) | 9.54e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.54e-07 | 10 |
glial cell | 9.54e-07 | 10 |
glioblast | 9.54e-07 | 10 |
glioblast (sensu Vertebrata) | 9.54e-07 | 10 |